Access to marshmallow field value - python

I begin with marshamallow and I try to validate a field. My schema is very simple.
class MySchema(Schema):
pid = fields.String(required=true)
visibility = fields.String(validate=OneOf(['public','private'])
#validates('visibility')
def visibility_changes(self, data, **kwargs):
# Load data from DB (based on ID)
db_record = load_data_from_db(self.pid) # <-- problem is here
# Check visibility changed
if db_record.get('visibility') != data:
do_some_check_here()
But using self.pid doesn't work. It raises an error AttributeError: 'MySchema' object has no attribute 'pid'.
What's the correct way to access to my "pid" field value into my #validates function ?
I tried using self.fields, self.load_fields.get('pid').get_value(), ... no easy way to access it, but I suppose that Marshmallow has such magic method.
Thanks for your help.

Related

Cannot update with FastAPI

When I run put from FastAPI docs with the following code, I get 500 Error: Internal Server Error`` and the terminal shows AttributeError: 'Test' object has no attribute ' items'```` and the terminal shows AttributeError: 'Test' object has no attribute 'items'.
I can create, get, delete, etc. normally, but for some reason I can't just put.
Also, if I try putting in a non-existent ID, I get a 404 error normally.
I would appreciate it if you could tell me more about it.
router
#router.put('/{id}', status_code=status.HTTP_202_ACCEPTED)
def update(id, request:schemas.Test ,db:Session = Depends(get_db)):
test= db.query(models.Test).filter(models.Test.id == id)
if not test.first():
raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail=f'Test with id {id} is not found')
test.update(request)
db.commit()
return 'updated'
models
from sqlalchemy import Column, Integer, String
from db import Base
class Test(Base):
__tablename__ = 'tests'
id = Column('id',Integer, primary_key=True,index=True)
title = Column('title',String(256))
schemas
from pydantic import BaseModel
class Test(BaseModel):
title:str
SQLAlchemy's update method on objects expects a dict. You're giving it a pydantic base model.
Pydantic's BaseModel supports a dict() method to return the object's properties as a dictionary. You can give this dictionary to your update method instead:
test.update(request.dict())
Also be aware that the request name is used for other things in FastAPI and might not be a good name for a route parameter. The id name is also a reference to a built-in Python function, so you'll usually want to name it test_id or something similar instead.

Update row (SQLAlchemy) with data from marshmallow

I'm using Flask, Flask-SQLAlchemy, Flask-Marshmallow + marshmallow-sqlalchemy, trying to implement REST api PUT method. I haven't found any tutorial using SQLA and Marshmallow implementing update.
Here is the code:
class NodeSchema(ma.Schema):
# ...
class NodeAPI(MethodView):
decorators = [login_required, ]
model = Node
def get_queryset(self):
if g.user.is_admin:
return self.model.query
return self.model.query.filter(self.model.owner == g.user)
def put(self, node_id):
json_data = request.get_json()
if not json_data:
return jsonify({'message': 'Invalid request'}), 400
# Here is part which I can't make it work for me
data, errors = node_schema.load(json_data)
if errors:
return jsonify(errors), 422
queryset = self.get_queryset()
node = queryset.filter(Node.id == node_id).first_or_404()
# Here I need some way to update this object
node.update(data) #=> raises AttributeError: 'Node' object has no attribute 'update'
# Also tried:
# node = queryset.filter(Node.id == node_id)
# node.update(data) <-- It doesn't if know there is any object
# Wrote testcase, when user1 tries to modify node of user2. Node doesn't change (OK), but user1 gets status code 200 (NOT OK).
db.session.commit()
return jsonify(), 200
UPDATED, 2022-12-08
Extending the ModelSchema from marshmallow-sqlalchemy instead of Flask-Marshmallow you can use the load method, which is defined like this:
load(data, *, session=None, instance=None, transient=False, **kwargs)
Putting that to use, it should look like that (or similar query):
node_schema.load(json_data, session= current_app.session, instance=Node().query.get(node_id))
And if you want to load without all required fields of Model, you can add the partial=True argument, like this:
node_schema.load(json_data, instance=Node().query.get(node_id), partial=True)
See the docs for more info (does not include definition of ModelSchema.load).
See the code for the load definition.
I wrestled with this issue for some time, and in consequence came back again and again to this post. In the end what made my situation difficult was that there was a confounding issue involving SQLAlchemy sessions. I figure this is common enough to Flask, Flask-SQLAlchemy, SQLAlchemy, and Marshmallow, to put down a discussion. I certainly, do not claim to be an expert on this, and yet I believe what I state below is essentially correct.
The db.session is, in fact, closely tied to the process of updating the DB with Marshmallow, and because of that decided to to give the details, but first the short of it.
Short Answer
Here is the answer I arrived at for updating the database using Marshmallow. It is a different approach from the very helpful post of Jair Perrut. I did look at the Marshmallow API and yet was unable to get his solution working in the code presented, because at the time I was experimenting with his solution I was not managing my SQLAlchemy sessions properly. To go a bit further, one might say that I wasn't managing them at all. The model can be updated in the following way:
user_model = user_schema.load(user)
db.session.add(user_model.data)
db.session.commit()
Give the session.add() a model with primary key and it will assume an update, leave the primary key out and a new record is created instead. This isn't all that surprising since MySQL has an ON DUPLICATE KEY UPDATE clause which performs an update if the key is present and creates if not.
Details
SQLAlchemy sessions are handled by Flask-SQLAlchemy during a request to the application. At the beginning of the request the session is opened, and when the request is closed that session is also closed. Flask provides hooks for setting up and tearing down the application where code for managing sessions and connections may be found. In the end, though, the SQLAlchemy session is managed by the developer, and Flask-SQLAlchemy just helps. Here is a particular case that illustrates the management of sessions.
Consider a function that gets a user dictionary as an argument and uses that with Marshmallow() to load the dictionary into a model. In this case, what is required is not the creation of a new object, but the update of an existing object. There are 2 things to keep in mind at the start:
The model classes are defined in a python module separate from any code, and these models require the session. Often the developer (Flask documentation) will put a line db = SQLAlchemy() at the head of this file to meet this requirement. This in fact, creates a session for the model.
from flask_sqlalchemy import SQLAlchemy
db = SQLAlchemy()
In some other separate file there may be a need for a SQLAlchemy session as well. For example, the code may need to update the model, or create a new entry, by calling a function there. Here is where one might find db.session.add(user_model) and db.session.commit(). This session is created in the same way as in the bullet point above.
There are 2 SQLAlchemy sessions created. The model sits in one (SignallingSession) and the module uses its own (scoped_session). In fact, there are 3. The Marshmallow UserSchema has sqla_session = db.session: a session is attached to it. This then is the third, and the details are found in the code below:
from marshmallow_sqlalchemy import ModelSchema
from donate_api.models.donation import UserModel
from flask_sqlalchemy import SQLAlchemy
db = SQLAlchemy()
class UserSchema(ModelSchema):
class Meta(object):
model = UserModel
strict = True
sqla_session = db.session
def some_function(user):
user_schema = UserSchema()
user['customer_id'] = '654321'
user_model = user_schema.load(user)
# Debug code:
user_model_query = UserModel.query.filter_by(id=3255161).first()
print db.session.object_session(user_model_query)
print db.session.object_session(user_model.data)
print db.session
db.session.add(user_model.data)
db.session.commit()
return
At the head of this module the model is imported, which creates its session, and then the module will create its own. Of course, as pointed out there is also the Marshmallow session. This is entirely acceptable to some degree because SQLAlchemy allows the developer to manage the sessions. Consider what happens when some_function(user) is called where user['id'] is assigned some value that exists in the database.
Since the user includes a valid primary key then db.session.add(user_model.data) knows that it is not creating a new row, but updating an existing one. This behavior should not be surprising, and is to be at least somewhat expected since from the MySQL documentation:
13.2.5.2 INSERT ... ON DUPLICATE KEY UPDATE Syntax
If you specify an ON DUPLICATE KEY UPDATE clause and a row to be inserted would cause a duplicate value in a UNIQUE index or PRIMARY KEY, an UPDATE of the old row occurs.
The snippet of code is then seen to be updating the customer_id on the dictionary for the user with primary key 32155161. The new customer_id is '654321'. The dictionary is loaded with Marshmallow and a commit done to the database. Examining the database it can be found that it was indeed updated. You might try two ways of verifying this:
In the code: db.session.query(UserModel).filter_by(id=325516).first()
In MySQL: select * from user
If you were to consider the following:
In the code: UserModel.query.filter_by(id=3255161).customer_id
You would find that the query brings back None. The model is not synchronized with the database. I have failed to manage our SQLAlchemy sessions correctly. In an attempt to bring clarity to this consider the output of the print statements when separate imports are made:
<sqlalchemy.orm.session.SignallingSession object at 0x7f81b9107b90>
<sqlalchemy.orm.session.SignallingSession object at 0x7f81b90a6150>
<sqlalchemy.orm.scoping.scoped_session object at 0x7f81b95eac50>
In this case the UserModel.query session is different from the Marshmallow session. The Marshmallow session is what gets loaded and added. This means that querying the model will not show our changes. In fact, if we do:
db.session.object_session(user_model.data).commit()
The model query will now bring back the updated customer_id! Consider the second alternative where the imports are done through flask_essentials:
from flask_sqlalchemy import SQLAlchemy
from flask_marshmallow import Marshmallow
db = SQLAlchemy()
ma = Marshmallow()
<sqlalchemy.orm.session.SignallingSession object at 0x7f00fe227910>
<sqlalchemy.orm.session.SignallingSession object at 0x7f00fe227910>
<sqlalchemy.orm.scoping.scoped_session object at 0x7f00fed38710>
And the UserModel.query session is now the same as the user_model.data (Marshmallow) session. Now the UserModel.query does reflect the change in the database: the Marshmallow and UserModel.query sessions are the same.
A note: the signalling session is the default session that Flask-SQLAlchemy uses. It extends the default session system with bind selection and modification tracking.
I have rolled out own solution. Hope it helps someone else. Solution implements update method on Node model.
Solution:
class Node(db.Model):
# ...
def update(self, **kwargs):
# py2 & py3 compatibility do:
# from six import iteritems
# for key, value in six.iteritems(kwargs):
for key, value in kwargs.items():
setattr(self, key, value)
class NodeAPI(MethodView):
decorators = [login_required, ]
model = Node
def get_queryset(self):
if g.user.is_admin:
return self.model.query
return self.model.query.filter(self.model.owner == g.user)
def put(self, node_id):
json_data = request.get_json()
if not json_data:
abort(400)
data, errors = node_schema.load(json_data) # validate with marshmallow
if errors:
return jsonify(errors), 422
queryset = self.get_queryset()
node = queryset.filter(self.model.id == node_id).first_or_404()
node.update(**data)
db.session.commit()
return jsonify(message='Successfuly updated'), 200
Latest Update [2020]:
You might facing the issue of mapping keys to the database models. Your request body have only updated fields so, you want to change only those without affecting others. There is an option to write multiple if conditions but that's not a good approach.
Solution
You can implement patch or put methods using sqlalchemy library only.
For example:
YourModelName.query.filter_by(
your_model_column_id = 12 #change 12: where condition to find particular row
).update(request_data)
request_data should be dict object. For ex.
{
"your_model_column_name_1": "Hello",
"your_model_column_name_2": "World",
}
In above case, only two columns will be updated that is: your_model_column_name_1 and your_model_column_name_2
Update function maps request_data to the database models and creates update query for you. Checkout this: https://docs.sqlalchemy.org/en/13/core/dml.html#sqlalchemy.sql.expression.update
Previous answer seems to be outdated as ModelSchema is now deprecated.
You should instead SQLAlchemyAutoSchema with the proper options.
class NodeSchema(SQLAlchemyAutoSchema):
class Meta:
model = Node
load_instance = True
sqla_session = db.session
node_schema = NodeSchema()
# then when you need to update a Node orm instance :
node_schema.load(node_data, instance=node, partial=True)
db.session.update()
Below is my solution with Flask-Marshmallow + marshmallow-sqlalchemy bundle as the author requested initially.
schemas.py
from flask import current_app
from flask_marshmallow import Marshmallow
from app.models import Node
ma = Marshmallow(current_app)
class NodeSchema(ma.SQLAlchemyAutoSchema):
class Meta:
model = Node
load_instance = True
load_instance is a key point here to make an update further.
routes.py
from flask import jsonify, request
from marshmallow import ValidationError
from app import db
#bp.route("/node/<node_uuid>/edit", methods=["POST"])
def edit_node(node_uuid):
json_data = request.get_json(force=True, silent=True)
node = Node.query.filter_by(
node_uuid=node_uuid
).first()
if node:
try:
schema = NodeSchema()
json_data["node_uuid"] = node_uuid
node = schema.load(json_data, instance=node)
db.session.commit()
return schema.jsonify(node)
except ValidationError as err:
return jsonify(err.messages), 422
else:
return jsonify("Not found"), 404
You have to check for existence of Node first, otherwise the new instance will be created.

Attaching extra information to model instance - django

I have a django model that I want to attach an extra piece of information to, depending on the environment the instance is in (which user is logged in). For this reason, I don't want to do it at the database level.
Is this okay to do? Or are there problems that I don't foresee?
in models.py
class FooOrBar(models.Model):
"""Type is 'foo' or 'bar'
"""
def __init__(self, type):
self.type = type
in views.py
class FooCheck(FooOrBar):
"""Never saved to the database
"""
def __init__(self, foo_or_bar):
self.__dict__ = foo_or_bar.__dict__.copy()
def check_type(self, external_type):
if external_type == 'foo':
self.is_foo = True
else:
self.is_foo = False
foos_or_bars = FooOrBar.objects.all()
foochecks = map(FooCheck, foos_or_bars)
for foocheck in foochecks:
foocheck.check_type('foo')
extra credit question: Is there a more efficient way of calling a method on multiple objects i.e. replacing the last forloop with something clever?
Okay, this does not work. Trying to delete a FooOrBar objects throws a complaint about
OperationalError at /
no such table: test_FooCheck
To get around this I'm just not going to inherit from FooOrBar, but if anyone has a suggestion on a better way to do it I'd be interested in hearing it
I had a similar issue, I did something like:
class Foo(models.Model):
# specific info goes here
class Bar(models.Model):
# specific info goes here
class FooBar(models.Model):
CLASS_TYPES = {
"foo":Foo,
"bar":Bar
}
type = models.CharField(choices=CLASS_TYPES)
id = models.IntegerField()
#field to identify FooBar
then you can get the object back using
object = FooBar.CLASS_TYPES[instance.type].objects.get(id=instance.id)
where instance is the FooBar instance

Equivalent of objects.latest() in App Engine

What would be the best way to get the latest inserted object using AppEngine ?
I know in Django this can be done using
MyObject.objects.latest()
in AppEngine I'd like to be able to do this
class MyObject(db.Model):
time = db.DateTimeProperty(auto_now_add=True)
# Return latest entry from MyObject.
MyObject.all().latest()
Any idea ?
Your best bet will be to implement a latest() classmethod directly on MyObject and call it like
latest = MyObject.latest()
Anything else would require monkeypatching the built-in Query class.
Update
I thought I'd see how ugly it would be to implement this functionality. Here's a mixin class you can use if you really want to be able to call MyObject.all().latest():
class LatestMixin(object):
"""A mixin for db.Model objects that will add a `latest` method to the
`Query` object returned by cls.all(). Requires that the ORDER_FIELD
contain the name of the field by which to order the query to determine the
latest object."""
# What field do we order by?
ORDER_FIELD = None
#classmethod
def all(cls):
# Get the real query
q = super(LatestMixin, cls).all()
# Define our custom latest method
def latest():
if cls.ORDER_FIELD is None:
raise ValueError('ORDER_FIELD must be defined')
return q.order('-' + cls.ORDER_FIELD).get()
# Attach it to the query
q.latest = latest
return q
# How to use it
class Foo(LatestMixin, db.Model):
ORDER_FIELD = 'timestamp'
timestamp = db.DateTimeProperty(auto_now_add=True)
latest = Foo.all().latest()
MyObject.all() returns an instance of the Query class
Order the results by time:
MyObject.all().order('-time')
So, assuming there is at least one entry, you can get the most recent MyObject directly by:
MyObject.all().order('-time')[0]
or
MyObject.all().order('-time').fetch(limit=1)[0]

Django, Python, trying to change field values / attributes in object retrieved from DB objects.all call, not working

I'm trying to change a specific field from a field in an object that I retrieved from a django db call.
class Dbobject ()
def __init__(self):
dbobject = Modelname.objects.all()
def test (self):
self.dbobject[0].fieldname = 'some new value'
then I am able to access a specific attribute like so:
objclass = Dbobject()
fieldvalue = dbobject.dbobject[0].fieldname
but I want to be able to use the "test" method of the Dbobject class to try to change the specific value on an object's attribute value, but it isn't changing it. I am stumped by this as this is how I thought I am supposed to change an object's attribute value.
I'm not sure if this is the problem or not, but I think you might be missing a save() method.
from models import Person
p = Person.objects.get(pk=100)
p.name = 'Rico'
p.save() # <== This writes it to the db. Is this what you're missing?
Above is the simple case. Adapted for what you wrote above, it'd be like:
dbobject.dbobject[0].fieldname = 'some new value'
dbobject.dbobject[0].save()
or, I'd write it more like:
rec = dbobject.dbobject[0]
rec.fieldname = 'some new value'
rec.save()
Also note that depending on whether and how you are using transactions, you may or may not see a change to the database until you commit.
I am not totally sure what you are trying to achieve, but shouldn't it be something like:
class Dbobject ():
def __init__(self):
self.dbobject = Modelname.objects.all()
def test (self):
self.dbobject[0].fieldname = 'some new value'

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