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Keras - ValueError: Could not interpret loss function identifier

I am trying to build the autoencoder structure detailed in this IEEE article. The autoencoder uses a separable loss function where it is required that I create a custom loss function for the "cluster loss" term of the separable loss function as a function of the average output of the encoder. I create my own layer called RffConnected that calculates the cluster loss and utilizes the add_loss method. Otherwise, this RffConnected layer should act as just a normal deep layer.
Here are my relevant code snippets:
import matplotlib.pyplot as plot
from mpl_toolkits.axes_grid1 import ImageGrid
import numpy as np
import math
from matplotlib.figure import Figure
import tensorflow as tf
import keras
from keras import layers
import random
import time
from os import listdir
#loads data from a text file
def loadData(basePath, samplesPerFile, sampleRate):
real = []
imag = []
fileOrder = []
for file in listdir(basePath):
if((file != "READ_ME") and ((file != "READ_ME.txt"))):
fid = open(basePath + "\\" + file, "r")
fileOrder.append(file)
t = 0
sampleEvery = samplesPerFile / sampleRate
temp1 = []
temp2 = []
times = []
for line in fid.readlines():
times.append(t)
samples = line.split("\t")
temp1.append(float(samples[0]))
temp2.append(float(samples[1]))
t = t + sampleEvery
real.append(temp1)
imag.append(temp2)
fid.close()
real = np.array(real)
imag = np.array(imag)
return real, imag, times, fileOrder
#####################################################################################################
#Breaks up and randomizes data
def breakUpData(real, imag, times, numPartitions, basePath):
if(len(real) % numPartitions != 0):
raise ValueError("Error: The length of the dataset must be divisible by the number of partitions.")
newReal = []
newImag = []
newTimes = []
fileOrder = listdir(basePath)
dataFiles = []
interval = int(len(real[0]) / numPartitions)
for i in range(0, interval):
newTimes.append(times[i])
for i in range(0, len(real)):
tempI = []
tempQ = []
for j in range(0, len(real[0])):
tempI.append(real[i, j])
tempQ.append(imag[i, j])
if((j + 1) % interval == 0):
newReal.append(tempI)
newImag.append(tempQ)
#fileName = fileOrder[i][0: fileOrder[i].find("_") + 3]
dataFiles.append(fileOrder[i])
tempI = []
tempQ = []
#randomizes the broken up dataset and the file list
for i in range(0, len(newReal)):
r = random.randint(0, len(newReal) - 1)
tempReal = newReal[i]
tempImag = newImag[i]
newReal[i] = newReal[r]
newImag[i] = newImag[r]
newReal[r] = tempReal
newImag[r] = tempImag
tempFile = dataFiles[i]
dataFiles[i] = dataFiles[r]
dataFiles[r] = tempFile
#return np.array(newReal), np.array(newImag), newTimes, dataFiles
return newReal, newImag, newTimes, dataFiles
#####################################################################################################
#custom loss layer for the RffAe-S that calculates the clustering loss term
class RffConnected(layers.Layer):
def __init__(self, output_dim, batchSize, beta, alpha):
super(RffConnected, self).__init__()
# self.total = tf.Variable(initial_value=tf.zeros((input_dim,)), trainable=False)
#array = np.zeros(output_dim)
self.iters = 0.0
self.beta = beta
self.alpha = alpha
self.batchSize = batchSize
self.output_dim = output_dim
self.sum = tf.zeros(output_dim, tf.float64)
self.moving_average = tf.zeros(output_dim, tf.float64)
self.clusterloss = tf.zeros(output_dim, tf.float64)
self.sum = tf.cast(self.sum, tf.float32)
self.moving_average = tf.cast(self.moving_average, tf.float32)
self.clusterloss = tf.cast(self.clusterloss, tf.float32)
# self.sum = keras.Input(shape=(self.output_dim,))
# self.moving_average = keras.Input(shape=(self.output_dim,))
# self.clusterloss = keras.Input(shape=(self.output_dim,))
def build(self, input_shape):
self.kernel = self.add_weight(name = 'kernel', \
shape = (int(input_shape[-1]), self.output_dim), \
initializer = 'normal', trainable = True)
#self.kernel = tf.cast(self.kernel, tf.float64)
super(RffConnected, self).build(int(input_shape[-1]))
def call(self, inputs):
#keeps track of training epochs
self.iters = self.iters + 1
#inputs = tf.cast(inputs, tf.float64)
#where this custom layer acts as a normal layer- the loss then uses this
#calc = keras.backend.dot(inputs, self.kernel)
calc = tf.matmul(inputs, self.kernel)
#cumulative sum of deep encoded features
#self.sum = state_ops.assign(self.sum, tf.reshape(tf.math.add(self.sum, calc), tf.shape(self.sum)))
#self.sum = tf.ops.state_ops.assign(self.sum, tf.math.add(self.sum, calc))
#self.sum.assign_add(calc)
self.sum = tf.math.add(self.sum, calc)
#calculate the moving average and loss if we have already trained one batch
if(self.iters >= self.batchSize):
self.moving_average = tf.math.divide(self.sum, self.iters)
self.clusterloss = tf.math.exp(\
tf.math.multiply(-1 * self.beta, tf.math.reduce_sum(tf.math.square(tf.math.subtract(inputs, self.moving_average)))))
#self.add_loss(tf.math.multiply(self.clusterloss, self.alpha))
self.add_loss(self.clusterloss.numpy() * self.alpha)
return calc
#####################################################################################################
def customloss(y_true, y_pred):
loss = tf.square(y_true - y_pred)
print(loss)
return loss
#####################################################################################################
realTraining = np.array(real[0:2200])
realTesting = np.array(real[2200:-1])
imagTraining = np.array(imag[0:2200])
imagTesting = np.array(imag[2200:-1])
numInputs = len(realTraining[0])
i_sig = keras.Input(shape=(numInputs,))
q_sig = keras.Input(shape=(numInputs,))
iRff = tf.keras.layers.experimental.RandomFourierFeatures(numInputs, \
kernel_initializer='gaussian', scale=9.0)(i_sig)
rff1 = keras.Model(inputs=i_sig, outputs=iRff)
qRff = tf.keras.layers.experimental.RandomFourierFeatures(numInputs, \
kernel_initializer='gaussian', scale=9.0)(q_sig)
rff2 = keras.Model(inputs=q_sig, outputs=qRff)
combined = layers.Concatenate()([iRff, qRff])
combineRff = tf.keras.layers.experimental.RandomFourierFeatures(4 * numInputs, \
kernel_initializer='gaussian', scale=10.0)(combined)
preprocess = keras.Model(inputs=[iRff, qRff], outputs=combineRff)
#print(realTraining[0:5])
preprocessedTraining = preprocess.predict([realTraining, imagTraining])
preprocessedTesting = preprocess.predict([realTesting, imagTesting])
################## Entering Encoder ######################
encoderIn = keras.Input(shape=(4*numInputs,))
#connected1 = layers.Dense(100, activation="sigmoid")(encoderIn)
clusterLossLayer = RffConnected(100, 30, 1.00, 100.00)(encoderIn)
#clusterLossLayer = myRffConnected(256)(connected1)
encoder = keras.Model(inputs=encoderIn, outputs=clusterLossLayer)
################## Entering Decoder ######################
connected2 = layers.Dense(125, activation="sigmoid")(clusterLossLayer)
relu1 = layers.ReLU()(connected2)
dropout = layers.Dropout(0.2)(relu1)
reshape1 = layers.Reshape((25, 5, 1))(dropout)
bn1 = layers.BatchNormalization()(reshape1)
trans1 = layers.Conv2DTranspose(1, (4, 2))(bn1)
ups1 = layers.UpSampling2D(size=(2, 1))(trans1)
relu2 = layers.ReLU()(ups1)
bn2 = layers.BatchNormalization()(relu2)
trans2 = layers.Conv2DTranspose(1, (4, 2))(bn2)
ups2 = layers.UpSampling2D(size=(2, 1))(trans2)
relu3 = layers.ReLU()(ups2)
bn3 = layers.BatchNormalization()(relu3)
trans3 = layers.Conv2DTranspose(1, (5, 2))(bn3)
ups3 = layers.UpSampling2D(size=(2, 1))(trans3)
relu4 = layers.ReLU()(ups3)
bn4 = layers.BatchNormalization()(relu4)
trans4 = layers.Conv2DTranspose(1, (7, 1))(bn4)
reshape2 = layers.Reshape((4*numInputs, 1, 1))(trans4)
autoencoder = keras.Model(inputs=encoderIn, outputs=reshape2)
encoded_input = keras.Input(shape=(None, 100))
decoder_layer = autoencoder.layers[-1]
#autoencoder.summary()
autoencoder.compile(optimizer='adam', loss=[autoencoder.losses[-1], customloss], metrics=['accuracy', 'accuracy'])
autoencoder.fit(preprocessedTraining, preprocessedTraining, epochs=100, batch_size=20, shuffle=True, validation_data=(preprocessedTesting, preprocessedTesting))
It seems like it runs for two training epochs then it gives me an error. I end up getting this error when I run it:
ValueError: Could not interpret loss function identifier: Tensor("rff_connected_137/Const:0", shape=(100,), dtype=float32)
I've already spent a considerable amount of time debugging this thing, although if you spot any more errors I would appreciate a heads-up. Thank you in advance.

According to the documentation of the keras Keras Model Training-Loss, the 'loss' attribute can take the value of float tensor (except for the sparse loss functions returning integer arrays) with a specific shape.
If it is necessary to combine two loss functions, it would be better to perform mathematical calculations within your custom loss function to return an output of float tensor. This reference might be a help Keras CustomLoss definition.

Cache environment for DQN

I need to make a cache environment for my DQN Agent. I need to do network caching, when a file is needed it goes on cache if there is space. If the file is in cache, the agent has a reward. If the file is not in cache and the agent doesn't put it in cache, it has a bad reward.
My environment cache doesn't work, what is the problem? someone can make it work ?
import numpy as np
import time
import sys
from gym.spaces import Discrete, Box
import pandas as pd
class CacheProva (object):
def __init__(self, cache_max):
# Counters
self.total_count = 0
self.miss_count = 0
self.action_space = [0, 1, 2]
self.df = pd.read_csv('data/size.csv')
self.df_cache = pd.DataFrame(columns=['movie', 'dim'])
self.observation = 0 #sarebbe self.cahe_size
self.n_actions = len(self.action_space)#self.observation + 1
self.n_features = 0
def miss_rate(self):
return self.miss_count / self.total_count
def step(self, action):
if self.hasDone():
raise ValueError("Simulation has finished, use reset() to restart simulation.")
for index, row in self.df.iterrows():
self.total_count += 1
for i, r in self.df_cache.iterrows():
#self.total_count += 1
if action == 0:#gia presente nella cache
self.df.at[index, row] == self.df_cache.at[i, r]
reward = 1
if action == 1:#mettere nella cache
reward = 0
self.df_cache.append(self.df.at[index, row])#aggiungere a df_cache
self.observation += self.df.at['size']
elif action == 2:#non è presente e non si mette
reward = -1
self.miss_count += 1
return self.observation, reward, self.total_count, self.miss_count
#self.cureindex
#if id è in cache size o cache size è vuota, action 0 con reward 1
#if id non è in cache size e non c'è posto, action 1 la sostituisci reward 0
# if id non è in cache size e non c'è posto, action 2 non fai nulla reward -1
def render(self):
pass
def reset(self):
self.total_count = 0
self.miss_count = 0
self.observation = 0
return self.total_count, self.miss_count, self.observation
#return self.df_cache
def hasDone(self):
#return self.cur_index == self.df.shape[0]
pass
def display(self):
print(self.observation)
The csv file is a chronology of netflix users, of the film and series watched.
this is my DQN :
import numpy as np
import tensorflow.compat.v1 as tf
tf.disable_v2_behavior()
np.random.seed(1)
tf.random.set_random_seed(1)
# Deep Q Network off-policy
class DeepQNetwork:
def __init__(
self,
n_actions,
n_features,
learning_rate=0.01,
reward_decay=0.9,
e_greedy=0.9,
replace_target_iter=300,
memory_size=500,
batch_size=32,
e_greedy_increment=None,
output_graph=False,
):
self.n_actions = n_actions
self.n_features = n_features
self.lr = learning_rate
self.gamma = reward_decay
self.epsilon_max = e_greedy
self.replace_target_iter = replace_target_iter
self.memory_size = memory_size
self.batch_size = batch_size
self.epsilon_increment = e_greedy_increment
self.epsilon = 0 if e_greedy_increment is not None else self.epsilon_max
# total learning step
self.learn_step_counter = 0
# initialize zero memory [s, a, r, s_]
self.memory = np.zeros((self.memory_size, n_features * 2 + 2))
# consist of [target_net, evaluate_net]
self._build_net()
t_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='target_net')
e_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='eval_net')
with tf.variable_scope('hard_replacement'):
self.target_replace_op = [tf.assign(t, e) for t, e in zip(t_params, e_params)]
self.sess = tf.Session()
if output_graph:
# $ tensorboard --logdir=logs
tf.summary.FileWriter("logs/", self.sess.graph)
self.sess.run(tf.global_variables_initializer())
self.cost_his = []
def _build_net(self):
# ------------------ all inputs ------------------------
self.s = tf.placeholder(tf.float32, [None, self.n_features], name='s') # input State
self.s_ = tf.placeholder(tf.float32, [None, self.n_features], name='s_') # input Next State
self.r = tf.placeholder(tf.float32, [None, ], name='r') # input Reward
self.a = tf.placeholder(tf.int32, [None, ], name='a') # input Action
w_initializer, b_initializer = tf.random_normal_initializer(0., 0.3), tf.constant_initializer(0.1)
# ------------------ build evaluate_net ------------------
with tf.variable_scope('eval_net'):
e1 = tf.layers.dense(self.s, 20, tf.nn.relu, kernel_initializer=w_initializer,
bias_initializer=b_initializer, name='e1')
self.q_eval = tf.layers.dense(e1, self.n_actions, kernel_initializer=w_initializer,
bias_initializer=b_initializer, name='q')
# ------------------ build target_net ------------------
with tf.variable_scope('target_net'):
t1 = tf.layers.dense(self.s_, 20, tf.nn.relu, kernel_initializer=w_initializer,
bias_initializer=b_initializer, name='t1')
self.q_next = tf.layers.dense(t1, self.n_actions, kernel_initializer=w_initializer,
bias_initializer=b_initializer, name='t2')
with tf.variable_scope('q_target'):
q_target = self.r + self.gamma * tf.reduce_max(self.q_next, axis=1, name='Qmax_s_') # shape=(None, )
self.q_target = tf.stop_gradient(q_target)
with tf.variable_scope('q_eval'):
a_indices = tf.stack([tf.range(tf.shape(self.a)[0], dtype=tf.int32), self.a], axis=1)
self.q_eval_wrt_a = tf.gather_nd(params=self.q_eval, indices=a_indices) # shape=(None, )
with tf.variable_scope('loss'):
self.loss = tf.reduce_mean(tf.squared_difference(self.q_target, self.q_eval_wrt_a, name='TD_error'))
with tf.variable_scope('train'):
self._train_op = tf.train.RMSPropOptimizer(self.lr).minimize(self.loss)
def store_transition(self, s, a, r, s_):
if not hasattr(self, 'memory_counter'):
self.memory_counter = 0
transition = np.hstack((s, [a, r], s_))
# replace the old memory with new memory
index = self.memory_counter % self.memory_size
self.memory[index, :] = transition
self.memory_counter += 1
def choose_action(self, observation):
# to have batch dimension when feed into tf placeholder
observation = observation[np.newaxis, :]
if np.random.uniform() < self.epsilon:
# forward feed the observation and get q value for every actions
actions_value = self.sess.run(self.q_eval, feed_dict={self.s: observation})
action = np.argmax(actions_value)
else:
action = np.random.randint(0, self.n_actions)
return action
def learn(self):
# check to replace target parameters
if self.learn_step_counter % self.replace_target_iter == 0:
self.sess.run(self.target_replace_op)
print('\ntarget_params_replaced\n')
# sample batch memory from all memory
if self.memory_counter > self.memory_size:
sample_index = np.random.choice(self.memory_size, size=self.batch_size)
else:
sample_index = np.random.choice(self.memory_counter, size=self.batch_size)
batch_memory = self.memory[sample_index, :]
_, cost = self.sess.run(
[self._train_op, self.loss],
feed_dict={
self.s: batch_memory[:, :self.n_features],
self.a: batch_memory[:, self.n_features],
self.r: batch_memory[:, self.n_features + 1],
self.s_: batch_memory[:, -self.n_features:],
})
self.cost_his.append(cost)
# increasing epsilon
self.epsilon = self.epsilon + self.epsilon_increment if self.epsilon < self.epsilon_max else self.epsilon_max
self.learn_step_counter += 1
def plot_cost(self):
import matplotlib.pyplot as plt
plt.plot(np.arange(len(self.cost_his)), self.cost_his)
plt.ylabel('Cost')
plt.xlabel('training steps')
plt.show()
if __name__ == '__main__':
DQN = DeepQNetwork(3,4, output_graph=False)

Style loss is always zero

I am trying to use feature reconstruction and style reconstruction losses on my model. For this, I followed the example code on PyTorch website for “Neural Style Transfer”.
https://pytorch.org/tutorials/advanced/neural_style_tutorial.html
Although the feature loss is calculated without problem, the style loss is always zero. And I could not find the reason since everything looks fine in the implementation. The calculation methods are the same as the proposed mathematical methods for these loss functions. Besides, as you know, the style and feature losses are almost the same in terms of calculation except Gram matrix step in style loss and no problem in feature loss.
Could anyone help me with this situation?
class Feature_and_style_losses():
def __init__(self, ):
self.vgg_model = models.vgg19(pretrained=True).features.cuda().eval()
self.content_layers = ['conv_16']
self.style_layers = ['conv_5']
def calculate_feature_and_style_losses(self, input_, target, feature_coefficient, style_coefficient):
i = 0
feature_losses = []
style_losses = []
for layer_ in self.vgg_model.children():
if isinstance(layer_, nn.Conv2d):
i += 1
name = "conv_{}".format(i)
if name in self.content_layers:
features_input = self.vgg_model(input_).detach()
features_target = self.vgg_model(target).detach()
feature_losses.append(self.feature_loss(features_input, features_target))
if name in self.style_layers:
style_input = self.vgg_model(input_).detach()
style_target = self.vgg_model(target).detach()
style_losses.append(self.style_loss(style_input, style_target))
feature_loss_value = (torch.mean(torch.from_numpy(np.array(feature_losses, dtype=np.float32)))) * feature_coefficient
style_loss_value = (torch.mean(torch.from_numpy(np.array(style_losses, dtype=np.float32)))) * style_coefficient
return feature_loss_value, style_loss_value
def feature_loss(self, input_, target):
target = target.detach()
feature_reconstruction_loss = F.mse_loss(input_, target)
return feature_reconstruction_loss
def gram_matrix(self, input_):
a, b, c, d = input_.size() #??? check size
features = input_.view(a*b, c*d)
#features_t = features.transpose(1, 2)
#G = features.bmm(features_t) / (b*c*d)
#print(features.shape)
G = torch.mm(features, features.t())
return G.div(a*b*c*d)
return G
def style_loss(self, input_, target):
G_input = self.gram_matrix(input_)
G_target = self.gram_matrix(target).detach()
#style_reconstruction_loss = self.feature_loss(G_input, G_target)
style_reconstruction_loss = F.mse_loss(G_input, G_target)
return style_reconstruction_loss
feature_loss_ = Feature_and_style_losses()
...
for e in range(epochs):
for i, batch in enumerate(dataloader):
...
real_C = Variable(batch["C"].type(Tensor))
fake_C = independent_decoder(features_all)
f_loss, s_loss = feature_loss_.calculate_feature_and_style_losses(fake_C, real_C, 1, 10)
loss_G_3 = loss_GAN_3 + lambda_pixel * (loss_pixel_3_object + loss_pixel_3_scene) * 0.5 + f_loss + s_loss
loss_G_3.backward(retain_graph=True)
optimizer_independent_decoder.step()
Best.

Why does the result when restoring a saved DDPG model differ significantly from the result when saving it?

I save the trained model after a certain number of episodes with the special save() function of the DDPG class (the network is saved when the reward reaches zero), but when I restore the model again using saver.restore(), the network gives out a reward equal to approximately -1800. Why is this happening, maybe I'm doing something wrong? My network:
import tensorflow as tf
import numpy as np
import gym
epsiode_steps = 500
# learning rate for actor
lr_a = 0.001
# learning rate for critic
lr_c = 0.002
gamma = 0.9
alpha = 0.01
memory = 10000
batch_size = 32
render = True
class DDPG(object):
def __init__(self, no_of_actions, no_of_states, a_bound, ):
self.memory = np.zeros((memory, no_of_states * 2 + no_of_actions + 1), dtype=np.float32)
# initialize pointer to point to our experience buffer
self.pointer = 0
self.sess = tf.Session()
self.noise_variance = 3.0
self.no_of_actions, self.no_of_states, self.a_bound = no_of_actions, no_of_states, a_bound,
self.state = tf.placeholder(tf.float32, [None, no_of_states], 's')
self.next_state = tf.placeholder(tf.float32, [None, no_of_states], 's_')
self.reward = tf.placeholder(tf.float32, [None, 1], 'r')
with tf.variable_scope('Actor'):
self.a = self.build_actor_network(self.state, scope='eval', trainable=True)
a_ = self.build_actor_network(self.next_state, scope='target', trainable=False)
with tf.variable_scope('Critic'):
q = self.build_crtic_network(self.state, self.a, scope='eval', trainable=True)
q_ = self.build_crtic_network(self.next_state, a_, scope='target', trainable=False)
self.ae_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='Actor/eval')
self.at_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='Actor/target')
self.ce_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='Critic/eval')
self.ct_params = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope='Critic/target')
# update target value
self.soft_replace = [
[tf.assign(at, (1 - alpha) * at + alpha * ae), tf.assign(ct, (1 - alpha) * ct + alpha * ce)]
for at, ae, ct, ce in zip(self.at_params, self.ae_params, self.ct_params, self.ce_params)]
q_target = self.reward + gamma * q_
td_error = tf.losses.mean_squared_error(labels=(self.reward + gamma * q_), predictions=q)
self.ctrain = tf.train.AdamOptimizer(lr_c).minimize(td_error, name="adam-ink", var_list=self.ce_params)
a_loss = - tf.reduce_mean(q)
# train the actor network with adam optimizer for minimizing the loss
self.atrain = tf.train.AdamOptimizer(lr_a).minimize(a_loss, var_list=self.ae_params)
tf.summary.FileWriter("logs2", self.sess.graph)
# initialize all variables
self.sess.run(tf.global_variables_initializer())
self.saver = tf.train.Saver()
self.saver.restore(self.sess, "Pendulum/nn.ckpt")
def choose_action(self, s):
a = self.sess.run(self.a, {self.state: s[np.newaxis, :]})[0]
a = np.clip(np.random.normal(a, self.noise_variance), -2, 2)
return a
def learn(self):
# soft target replacement
self.sess.run(self.soft_replace)
indices = np.random.choice(memory, size=batch_size)
batch_transition = self.memory[indices, :]
batch_states = batch_transition[:, :self.no_of_states]
batch_actions = batch_transition[:, self.no_of_states: self.no_of_states + self.no_of_actions]
batch_rewards = batch_transition[:, -self.no_of_states - 1: -self.no_of_states]
batch_next_state = batch_transition[:, -self.no_of_states:]
self.sess.run(self.atrain, {self.state: batch_states})
self.sess.run(self.ctrain, {self.state: batch_states, self.a: batch_actions, self.reward: batch_rewards,
self.next_state: batch_next_state})
# we define a function store_transition which stores all the transition information in the buffer
def store_transition(self, s, a, r, s_):
trans = np.hstack((s, a, [r], s_))
index = self.pointer % memory
self.memory[index, :] = trans
self.pointer += 1
if self.pointer > memory:
self.noise_variance *= 0.99995
self.learn()
# we define the function build_actor_network for builing our actor network and after crtic network
def build_actor_network(self, s, scope, trainable)
with tf.variable_scope(scope):
l1 = tf.layers.dense(s, 30, activation=tf.nn.tanh, name='l1', trainable=trainable)
a = tf.layers.dense(l1, self.no_of_actions, activation=tf.nn.tanh, name='a', trainable=trainable)
return tf.multiply(a, self.a_bound, name="scaled_a")
def build_crtic_network(self, s, a, scope, trainable):
with tf.variable_scope(scope):
n_l1 = 30
w1_s = tf.get_variable('w1_s', [self.no_of_states, n_l1], trainable=trainable)
w1_a = tf.get_variable('w1_a', [self.no_of_actions, n_l1], trainable=trainable)
b1 = tf.get_variable('b1', [1, n_l1], trainable=trainable)
net = tf.nn.tanh(tf.matmul(s, w1_s) + tf.matmul(a, w1_a) + b1)
q = tf.layers.dense(net, 1, trainable=trainable)
return q
def save(self):
self.saver.save(self.sess, "Pendulum/nn.ckpt")
env = gym.make("Pendulum-v0")
env = env.unwrapped
env.seed(1)
no_of_states = env.observation_space.shape[0]
no_of_actions = env.action_space.shape[0]
a_bound = env.action_space.high
ddpg = DDPG(no_of_actions, no_of_states, a_bound)
total_reward = []
no_of_episodes = 300
# for each episodes
for i in range(no_of_episodes):
# initialize the environment
s = env.reset()
# episodic reward
ep_reward = 0
for j in range(epsiode_steps):
env.render()
# select action by adding noise through OU process
a = ddpg.choose_action(s)
# peform the action and move to the next state s
s_, r, done, info = env.step(a)
# store the the transition to our experience buffer
# sample some minibatch of experience and train the network
ddpg.store_transition(s, a, r, s_)
# update current state as next state
s = s_
# add episodic rewards
ep_reward += r
if int(ep_reward) == 0 and i > 200:
ddpg.save()
print("save")
quit()
if j == epsiode_steps - 1:
total_reward.append(ep_reward)
print('Episode:', i, ' Reward: %i' % int(ep_reward))
break

Tensorflow evaluate: Aborted (core dumped)

tl;dr: I input a word to my model, and am supposed to get a list of similar words and their associated measures of similarity back. I get an error: Aborted (core dumped).
My goal is to determine which words are similar to an input word, based on their feature vectors. I have model already trained. I load it and call two functions:
def main(argv=None):
model = NVDM(args)
sess_saver = tf.train.Saver()
sess = tf.Session()
init = tf.initialize_all_variables()
sess.run(init)
loaded = load_for_similar(sess, sess_saver) #my function
wm = word_match(sess, loaded[0], loaded[1], "bottle", loaded[2], loaded[3], topN=5)
My problem is that I can't print out the words which are similar and the associated similarity measure. I tried (in main):
sess.run(wm)
wm[0].eval(session=sess)
print(wm)
All of which gave me the error:
F tensorflow/core/kernels/strided_slice_op.cc:316] Check failed: tmp.CopyFrom(input.Slice(begin[0], end[0]), final_shape)
Aborted (core dumped)
This tells me I'm not running the session properly. What am I doing wrong?
Details on the functions, just in case:
The function 'load_for_similar' restores the weights and bias of the decoder in my model (a variational autoencoder), and normalizes them. It also reverses the order of the keys and values in my vocabulary dictionary for later use:
def load_for_similar(sess, saver_obj):
saver_obj.restore(sess, "./CA_checkpoints/saved_model.ckpt")
vocab_file = '/path/to/vocab.pkl'
t1 = loader_object(vocab_file)
v1 = t1.get_vocab()
v1_rev = {k:v for v, k in v1.iteritems()}
decoder_mat = tf.get_collection(tf.GraphKeys.VARIABLES, scope='decoder')[0]
decoder_bias = tf.get_collection(tf.GraphKeys.VARIABLES, scope='decoder')[1]
return (find_norm(decoder_mat), find_norm(decoder_bias), v1, v1_rev)
To find similar words, I pass the normalized weight matrix and bias in to an new function, along with the feature vector of my word (vec):
def find_similar(sess, Weights, vec, bias):
dists = tf.add(tf.reduce_sum(tf.mul(Weights, vec)), bias)
best = argsort(sess, dists, reverse=True)
dist_sort = tf.nn.top_k(dists, k=dists.get_shape().as_list()[0], sorted=True).values
return dist_sort, best
Finally, I want to match the words that are closest to my supplied word, "bottle":
def word_match(sess, norm_mat , norm_bias, word_ , vocab, vocab_inverse , topN = 10):
idx = vocab[word_]
similarity_meas , indexes = find_similar(sess, norm_mat , norm_mat[idx], norm_bias)
words = tf.gather(vocab_inverse.keys(), indexes[:topN])
return (words, similarity_meas[:topN])
EDIT: in response to mrry's comment, here is the model (I hope this is what you wanted?). This code depends on utils.py, a separate utilities file. I will include that as well. Please note that this code is heavily based on Yishu Miao's and Sarath Nair's.
class NVDM(object):
""" Neural Variational Document Model -- BOW VAE.
"""
def __init__(self,
vocab_size=15000, #was 2000
n_hidden=500,
n_topic=50,
n_sample=1,
learning_rate=1e-5,
batch_size=100, #was 64
non_linearity=tf.nn.tanh):
self.vocab_size = vocab_size
self.n_hidden = n_hidden
self.n_topic = n_topic
self.n_sample = n_sample
self.non_linearity = non_linearity
self.learning_rate = learning_rate/batch_size #CA
self.batch_size = batch_size
self.x = tf.placeholder(tf.float32, [None, vocab_size], name='input')
self.mask = tf.placeholder(tf.float32, [None], name='mask') # mask paddings
# encoder
with tf.variable_scope('encoder'):
self.enc_vec = utils.mlp(self.x, [self.n_hidden, self.n_hidden])
self.mean = utils.linear(self.enc_vec, self.n_topic, scope='mean')
self.logsigm = utils.linear(self.enc_vec,
self.n_topic,
bias_start_zero=True,
matrix_start_zero=False,
scope='logsigm')
self.kld = -0.5 * tf.reduce_sum(1 - tf.square(self.mean) + 2 * self.logsigm - tf.exp(2 * self.logsigm), 1)
self.kld = self.mask*self.kld # mask paddings
with tf.variable_scope('decoder'):
if self.n_sample ==1: # single sample
p1 = tf.cast(tf.reduce_sum(self.mask), tf.int32) #needed for random normal generation
eps = tf.random_normal((p1, self.n_topic), 0, 1)
doc_vec = tf.mul(tf.exp(self.logsigm), eps) + self.mean
logits = tf.nn.log_softmax(utils.linear(doc_vec, self.vocab_size, scope='projection'))
self.recons_loss = -tf.reduce_sum(tf.mul(logits, self.x), 1)
# multiple samples
else:
eps = tf.random_normal((self.n_sample*batch_size, self.n_topic), 0, 1)
eps_list = tf.split(0, self.n_sample, eps)
recons_loss_list = []
for i in xrange(self.n_sample):
if i > 0: tf.get_variable_scope().reuse_variables()
curr_eps = eps_list[i]
doc_vec = tf.mul(tf.exp(self.logsigm), curr_eps) + self.mean
logits = tf.nn.log_softmax(utils.linear(doc_vec, self.vocab_size, scope='projection'))
recons_loss_list.append(-tf.reduce_sum(tf.mul(logits, self.x), 1))
self.recons_loss = tf.add_n(recons_loss_list) / self.n_sample
self.objective = self.recons_loss + self.kld
optimizer = tf.train.AdamOptimizer(learning_rate=self.learning_rate)
fullvars = tf.trainable_variables()
enc_vars = utils.variable_parser(fullvars, 'encoder')
dec_vars = utils.variable_parser(fullvars, 'decoder')
enc_grads = tf.gradients(self.objective, enc_vars)
dec_grads = tf.gradients(self.objective, dec_vars)
self.optim_enc = optimizer.apply_gradients(zip(enc_grads, enc_vars))
self.optim_dec = optimizer.apply_gradients(zip(dec_grads, dec_vars))
def minibatch_bow(it1, Instance1, n_samples, batch_size, used_ints = set()):
available = set(np.arange(n_samples)) - used_ints #
if len(available) < batch_size:
indices = np.array(list(available))
else:
indices = np.random.choice(tuple(available), batch_size, replace=False)
used = used_ints
mb = itemgetter(*indices)(it1)
batch_xs = Instance1._bag_of_words(mb, vocab_size=15000)
batch_flattened = np.ravel(batch_xs)
index_positions = np.where(batch_flattened > 0)[0]
return (batch_xs, index_positions, set(indices)) #batch_xs[0] is the bag of words; batch_xs[1] is the 0/1 word used/not;
def train(sess, model, train_file, vocab_file, saver_obj, training_epochs, alternate_epochs, batch_size):
Instance1 = testchunk_Nov23.testLoader(train_file, vocab_file)
data_set = Instance1.get_batch(batch_size) #get all minibatches of size 100
n_samples = Instance1.num_reviews()
train_batches = list(data_set) #this is an itertools.chain object
it1_train = list(itertools.chain(*train_batches)) #length is 732,356. This is all the reviews.atch_size
if len(it1_train) % batch_size != 0:
total_batch = int(len(it1_train)/batch_size) + 1
else:
total_batch = int(len(it1_train)/batch_size)
trainfilesave = "train_ELBO_and_perplexity_Dec1.txt"
#Training
train_time = time.time()
for epoch in range(training_epochs):
for switch in xrange(0, 2):
if switch == 0:
optim = model.optim_dec
print_mode = 'updating decoder'
else:
optim = model.optim_enc
print_mode = 'updating encoder'
with open(trainfilesave, 'w') as f:
for i in xrange(alternate_epochs):
loss_sum = 0.0
kld_sum = 0.0
word_count = 0
used_indices = set()
for idx_batch in range(total_batch): #train_batches:
mb = minibatch_bow(it1_train, Instance1, n_samples, batch_size, used_ints=used_indices)
print('minibatch', idx_batch)
used_indices.update(mb[2])
num_mb = np.ones(mb[0][0].shape[0])
input_feed = {model.x.name: mb[0][0], model.mask: num_mb}
_, (loss, kld) = sess.run((optim,[model.objective, model.kld]) , input_feed)
loss_sum += np.sum(loss)
And the utils.py file:
def linear(inputs,
output_size,
no_bias=False,
bias_start_zero=False,
matrix_start_zero=False,
scope=None):
"""Define a linear connection."""
with tf.variable_scope(scope or 'Linear'):
if matrix_start_zero:
matrix_initializer = tf.constant_initializer(0)
else:
matrix_initializer = None
if bias_start_zero:
bias_initializer = tf.constant_initializer(0)
else:
bias_initializer = None
input_size = inputs.get_shape()[1].value
matrix = tf.get_variable('Matrix', [input_size, output_size],
initializer=matrix_initializer)
bias_term = tf.get_variable('Bias', [output_size],
initializer=bias_initializer)
output = tf.matmul(inputs, matrix)
if not no_bias:
output = output + bias_term
return output
def mlp(inputs,
mlp_hidden=[],
mlp_nonlinearity=tf.nn.tanh,
scope=None):
"""Define an MLP."""
with tf.variable_scope(scope or 'Linear'):
mlp_layer = len(mlp_hidden)
res = inputs
for l in xrange(mlp_layer):
res = mlp_nonlinearity(linear(res, mlp_hidden[l], scope='l'+str(l)))
return res