I am trying to install pandas to use in my python code. I was able to upgrade my pip using pip install upgrade pip but when I try to install pandas using pip install pandas I get the following errors:
Traceback (most recent call last):
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\fcompiler\compaq.py", line 78
, in CompaqVisualFCompiler
m.initialize()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\msvccompiler.py", line 48, in
initialize
_MSVCCompiler.initialize(self)
File "C:\msys64\mingw64\lib\python3.9\distutils\msvccompiler.py", line 259, in initialize
self.__paths = self.get_msvc_paths("path")
File "C:\msys64\mingw64\lib\python3.9\distutils\msvccompiler.py", line 602, in get_msvc_paths
r"\Win32 (%s)\Directories" % (self.__root, platform))
AttributeError: 'MSVCCompiler' object has no attribute '_MSVCCompiler__root'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\Brian\AppData\Local\Temp\tmp94oxoujq_in_process.py", line 363, in <module>
main()
File "C:\Users\Brian\AppData\Local\Temp\tmp94oxoujq_in_process.py", line 345, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "C:\Users\Brian\AppData\Local\Temp\tmp94oxoujq_in_process.py", line 164, in prepare_metadata_for_build_wheel
return hook(metadata_directory, config_settings)
File "C:\Users\Brian\AppData\Local\Temp\pip-build-env-tr54un10\overlay\lib\python3.9\site-packages\setuptools\build_meta.py", line 157, in prepare
e_metadata_for_build_wheel
self.run_setup()
File "C:\Users\Brian\AppData\Local\Temp\pip-build-env-tr54un10\overlay\lib\python3.9\site-packages\setuptools\build_meta.py", line 248, in run_se
tup
super(_BuildMetaLegacyBackend,
File "C:\Users\Brian\AppData\Local\Temp\pip-build-env-tr54un10\overlay\lib\python3.9\site-packages\setuptools\build_meta.py", line 142, in run_se
tup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 508, in <module>
setup_package()
File "setup.py", line 500, in setup_package
setup(**metadata)
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\core.py", line 169, in setup
return old_setup(**new_attr)
File "C:\Users\Brian\AppData\Local\Temp\pip-build-env-tr54un10\overlay\lib\python3.9\site-packages\setuptools\__init__.py", line 165, in setup
return distutils.core.setup(**attrs)
File "C:\msys64\mingw64\lib\python3.9\distutils\core.py", line 148, in setup
dist.run_commands()
File "C:\msys64\mingw64\lib\python3.9\distutils\dist.py", line 966, in run_commands
self.run_command(cmd)
File "C:\msys64\mingw64\lib\python3.9\distutils\dist.py", line 985, in run_command
cmd_obj.run()
File "C:\Users\Brian\AppData\Local\Temp\pip-build-env-tr54un10\overlay\lib\python3.9\site-packages\setuptools\command\dist_info.py", line 31, in
run
egg_info.run()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\egg_info.py", line 24
, in run
self.run_command("build_src")
File "C:\msys64\mingw64\lib\python3.9\distutils\cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "C:\msys64\mingw64\lib\python3.9\distutils\dist.py", line 985, in run_command
cmd_obj.run()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\build_src.py", line 1
44, in run
self.build_sources()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\build_src.py", line 1
55, in build_sources
self.build_library_sources(*libname_info)
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\build_src.py", line 2
88, in build_library_sources
sources = self.generate_sources(sources, (lib_name, build_info))
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\build_src.py", line 3
78, in generate_sources
source = func(extension, build_dir)
File "numpy\core\setup.py", line 658, in get_mathlib_info
st = config_cmd.try_link('int main(void) { return 0;}')
File "C:\msys64\mingw64\lib\python3.9\distutils\command\config.py", line 241, in
try_link
self._check_compiler()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\command\config.py", line 80,
in _check_compiler
self.fcompiler = new_fcompiler(compiler=self.fcompiler,
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\fcompiler\__init__.py", line
876, in new_fcompiler
load_all_fcompiler_classes()
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\fcompiler\__init__.py", line
777, in load_all_fcompiler_classes
__import__ (module_name)
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\fcompiler\compaq.py", line 54
, in <module>
class CompaqVisualFCompiler(FCompiler):
File "C:\Users\Brian\AppData\Local\Temp\pip-install-i72pcle8\numpy_328f6081d36f426b90572be17f203722\numpy\distutils\fcompiler\compaq.py", line 83
, in CompaqVisualFCompiler
if '_MSVCCompiler__root' in str(msg):
NameError: name 'msg' is not defined
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
Encountered error while generating package metadata.
See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
[end of output]
× pip subprocess to install build dependencies did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
Before upgrading my pip, I tried installing pandas but none of the versions that I tried to install would download; however, I don't think I was getting these same errors before I upgraded pip. Can someone help me figure out how to install pandas? Is there a different way that I need to install it without using pip install pandas?
Remove the NumPy then try to install pandas again.
pip uninstall package_name
Related
I am trying to install this module. When I run the command
pip install -r requirements.txt
I get the following:
Getting requirements to build wheel ... error
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [32 lines of output]
Traceback (most recent call last):
File "/Users/voi/Library/Python/3.8/lib/python/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in <module>
main()
File "/Users/voi/Library/Python/3.8/lib/python/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/Users/voi/Library/Python/3.8/lib/python/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 130, in get_requires_for_build_wheel
return hook(config_settings)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/build_meta.py", line 146, in get_requires_for_build_wheel
return self._get_build_requires(
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/build_meta.py", line 127, in _get_build_requires
self.run_setup()
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/build_meta.py", line 142, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 8, in <module>
setup(
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/__init__.py", line 165, in setup
return distutils.core.setup(**attrs)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/_distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/dist.py", line 429, in __init__
_Distribution.__init__(self, {
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/_distutils/dist.py", line 293, in __init__
self.finalize_options()
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/dist.py", line 721, in finalize_options
ep(self)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/dist.py", line 727, in _finalize_setup_keywords
ep.require(installer=self.fetch_build_egg)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/pkg_resources/__init__.py", line 2483, in require
items = working_set.resolve(reqs, env, installer, extras=self.extras)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/pkg_resources/__init__.py", line 790, in resolve
raise VersionConflict(dist, req).with_context(dependent_req)
pkg_resources.VersionConflict: (setuptools 49.2.1 (/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages), Requirement.parse('setuptools>=58.0'))
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
I have no earthly idea on what to do. I have tried doing this directly in terminal as well as in a virtual environment and neither has worked.
I am now trying to run a program on a super computer on which I cannot run sudo or easy_install. The program needs pandas so I need to pip install pandas but I keep getting this error message even thought I have tried "pip install --upgrade pip" already.
You are using pip version 8.1.2, however version 9.0.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
--edit--
Here is the error message when I pip3 install pandas.
pip3 install pandas
Collecting pandas
Using cached pandas-0.22.0.tar.gz
Complete output from command python setup.py egg_info:
Running from numpy source directory.
/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py:369: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
run_build = parse_setuppy_commands()
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'python_requires'
warnings.warn(msg)
/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/system_info.py:624: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'python_requires'
warnings.warn(msg)
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'define_macros'
warnings.warn(msg)
Traceback (most recent call last):
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 239, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 269, in run
return func()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 238, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 394, in <module>
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 386, in setup_package
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/core.py", line 169, in setup
File "/usr/lib64/python3.4/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib64/python3.4/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3.4/site-packages/setuptools/command/bdist_egg.py", line 151, in run
self.run_command("egg_info")
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/egg_info.py", line 26, in run
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 148, in run
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 165, in build_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 324, in build_extension_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 377, in generate_sources
File "numpy/core/setup.py", line 422, in generate_config_h
return tag
File "numpy/core/setup.py", line 48, in check_types
min_numpy_ver = '1.9.0'
File "numpy/core/setup.py", line 281, in check_types
pjoin(ujson_lib,'ultrajsondec.c'),
SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-build-xqyfs1o1/pandas/setup.py", line 743, in <module>
**setuptools_kwargs)
File "/usr/lib64/python3.4/distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 268, in __init__
self.fetch_build_eggs(attrs['setup_requires'])
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 312, in fetch_build_eggs
replace_conflicting=True,
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 846, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 1091, in best_match
return self.obtain(req, installer)
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 1103, in obtain
return installer(requirement)
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 379, in fetch_build_egg
return cmd.easy_install(req)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 638, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 668, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 851, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 1079, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 1065, in run_setup
run_setup(setup_script, args)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 242, in run_setup
raise
File "/usr/lib64/python3.4/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib64/python3.4/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 166, in save_modules
saved_exc.resume()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 141, in resume
compat.reraise(type, exc, self._tb)
File "/usr/lib/python3.4/site-packages/setuptools/compat.py", line 69, in reraise
raise value.with_traceback(tb)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 239, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 269, in run
return func()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 238, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 394, in <module>
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 386, in setup_package
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/core.py", line 169, in setup
File "/usr/lib64/python3.4/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib64/python3.4/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3.4/site-packages/setuptools/command/bdist_egg.py", line 151, in run
self.run_command("egg_info")
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/egg_info.py", line 26, in run
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 148, in run
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 165, in build_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 324, in build_extension_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 377, in generate_sources
File "numpy/core/setup.py", line 422, in generate_config_h
return tag
File "numpy/core/setup.py", line 48, in check_types
min_numpy_ver = '1.9.0'
File "numpy/core/setup.py", line 281, in check_types
pjoin(ujson_lib,'ultrajsondec.c'),
SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel.
/tmp/easy_install-gv5il123/numpy-1.14.1/temp/tmpsx06jzi5/source.c:1:19: fatal error: cblas.h: No such file or directory
#include <cblas.h>
^
compilation terminated.
/tmp/easy_install-gv5il123/numpy-1.14.1/temp/tmpsx06jzi5/source.c:1:19: fatal error: cblas.h: No such file or directory
#include <cblas.h>
^
compilation terminated.
non-existing path in 'numpy/distutils': 'site.cfg'
_configtest.c:1:5: warning: conflicting types for built-in function ‘exp’
int exp (void);
^~~
_configtest.o: In function `main':
/tmp/easy_install-gv5il123/numpy-1.14.1/_configtest.c:6: undefined reference to `exp'
collect2: error: ld returned 1 exit status
_configtest.o: In function `main':
/tmp/easy_install-gv5il123/numpy-1.14.1/_configtest.c:6: undefined reference to `exp'
collect2: error: ld returned 1 exit status
_configtest.c:1:5: warning: conflicting types for built-in function ‘exp’
int exp (void);
^~~
_configtest.c:1:20: fatal error: Python.h: No such file or directory
#include <Python.h>
^
compilation terminated.
_configtest.c:1:20: fatal error: Python.h: No such file or directory
#include <Python.h>
^
compilation terminated.
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in
/tmp/pip-build-xqyfs1o1/pandas/
You are using pip version 8.1.2, however version 9.0.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
You are missing the packages python-dev and python-devel.
But since you are not root on that server you probably cannot install them yourself. Basically you could ask the administrator if he could install them for you.
I would recommend installing a local version of Python and install the packages there.
By the way: Since you are not root pip would fail anyways since you probably do not have the right to globally install packages. You should use pip install <package> --user instead.
On our linux redhat RHEL 6 cluster, I downloaded cryptography-0.8.2.tar.gz and then ran
python setup.py install --user
in the cryptography-0.8.2 directory. I am getting the following error. Can anyone help me solve it? I'm not up to speed on weak references, just trying to install the cryptography module. Thanks much!
rcook#rzgpu2 (cryptography-0.8.2 ): python setup.py install --user
running install
Traceback (most recent call last):
File "setup.py", line 342, in <module>
**keywords_with_side_effects(sys.argv)
File "/usr/apps/python/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/apps/python/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/apps/python/lib/python2.7/distutils/dist.py", line 971, in run_command
cmd_obj.ensure_finalized()
File "/usr/apps/python/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
self.finalize_options()
File "setup.py", line 119, in finalize_options
self.distribution.ext_modules = get_ext_modules()
File "setup.py", line 78, in get_ext_modules
from cryptography.hazmat.bindings.commoncrypto.binding import (
File "src/cryptography/hazmat/bindings/commoncrypto/binding.py", line 14, in <module>
class Binding(object):
File "src/cryptography/hazmat/bindings/commoncrypto/binding.py", line 36, in Binding
"-framework", "Security", "-framework", "CoreFoundation"
File "src/cryptography/hazmat/bindings/utils.py", line 97, in build_ffi_for_binding
extra_link_args=extra_link_args,
File "src/cryptography/hazmat/bindings/utils.py", line 106, in build_ffi
ffi.cdef(cdef_source)
File "/g/g0/rcook/.local/lib/python2.7/site-packages/cffi/api.py", line 106, in cdef
self._parser.parse(csource, override=override, packed=packed)
File "/g/g0/rcook/.local/lib/python2.7/site-packages/cffi/cparser.py", line 165, in parse
self._internal_parse(csource)
File "/g/g0/rcook/.local/lib/python2.7/site-packages/cffi/cparser.py", line 199, in _internal_parse
realtype = self._get_type(decl.type, name=decl.name)
File "/g/g0/rcook/.local/lib/python2.7/site-packages/cffi/cparser.py", line 360, in _get_type
return self._get_struct_union_enum_type('struct', type, name)
File "/g/g0/rcook/.local/lib/python2.7/site-packages/cffi/cparser.py", line 434, in _get_struct_union_enum_type
return self._structnode2type[type]
File "/usr/apps/python/lib/python2.7/weakref.py", line 256, in __getitem__
return self.data[ref(key)]
TypeError: cannot create weak reference to 'Struct' object
The problem is actually in the pycparser module.
As per https://bugs.launchpad.net/openstack-gate/+bug/1446882 do the following:
pip uninstall pycparser && pip install -Iv pycparser==2.10
As it turns out pycparser-2.11 is the culprit for this error message/bug.
pip uninstall pycparser && pip install -Iv pycparser==2.10
I am trying to install GDAL in virtual environment based on the various solutions out there.
However the download itself already fails:
$ pip install --no-install GDAL
Here is the pip.log
------------------------------------------------------------
/Users/test/venv/bin/pip run on Sun Jun 2 15:35:15 2013
Downloading/unpacking GDAL
Running setup.py egg_info for package GDAL
running egg_info
writing pip-egg-info/GDAL.egg-info/PKG-INFO
writing top-level names to pip-egg-info/GDAL.egg-info/top_level.txt
writing dependency_links to pip-egg-info/GDAL.egg-info/dependency_links.txt
warning: manifest_maker: standard file '-c' not found
Traceback (most recent call last):
File "<string>", line 16, in <module>
File "/Users/test/venv/build/GDAL/setup.py", line 267, in <module>
ext_modules = ext_modules )
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "<string>", line 14, in replacement_run
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 259, in find_sources
mm.run()
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 325, in run
self.add_defaults()
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 361, in add_defaults
sdist.add_defaults(self)
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/sdist.py", line 211, in add_defaults
build_ext = self.get_finalized_command('build_ext')
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 312, in get_finalized_command
cmd_obj.ensure_finalized()
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
self.finalize_options()
File "/Users/test/venv/build/GDAL/setup.py", line 164, in finalize_options
self.gdaldir = self.get_gdal_config('prefix')
File "/Users/test/venv/build/GDAL/setup.py", line 144, in get_gdal_config
return fetch_config(option)
File "/Users/test/venv/build/GDAL/setup.py", line 97, in fetch_config
raise gdal_config_error, e""")
File "<string>", line 4, in <module>
__main__.gdal_config_error: [Errno 2] No such file or directory
Complete output from command python setup.py egg_info:
running egg_info
writing pip-egg-info/GDAL.egg-info/PKG-INFO
writing top-level names to pip-egg-info/GDAL.egg-info/top_level.txt
writing dependency_links to pip-egg-info/GDAL.egg-info/dependency_links.txt
warning: manifest_maker: standard file '-c' not found
Traceback (most recent call last):
File "<string>", line 16, in <module>
File "/Users/test/venv/build/GDAL/setup.py", line 267, in <module>
ext_modules = ext_modules )
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "<string>", line 14, in replacement_run
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 259, in find_sources
mm.run()
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 325, in run
self.add_defaults()
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/egg_info.py", line 361, in add_defaults
sdist.add_defaults(self)
File "/Users/test/venv/lib/python2.7/site-packages/distribute-0.6.34-py2.7.egg/setuptools/command/sdist.py", line 211, in add_defaults
build_ext = self.get_finalized_command('build_ext')
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 312, in get_finalized_command
cmd_obj.ensure_finalized()
File "/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
self.finalize_options()
File "/Users/test/venv/build/GDAL/setup.py", line 164, in finalize_options
self.gdaldir = self.get_gdal_config('prefix')
File "/Users/test/venv/build/GDAL/setup.py", line 144, in get_gdal_config
return fetch_config(option)
File "/Users/test/venv/build/GDAL/setup.py", line 97, in fetch_config
raise gdal_config_error, e""")
File "<string>", line 4, in <module>
__main__.gdal_config_error: [Errno 2] No such file or directory
----------------------------------------
Command python setup.py egg_info failed with error code 1 in /Users/test/venv/build/GDAL
Exception information:
Traceback (most recent call last):
File "/Users/test/venv/lib/python2.7/site-packages/pip-1.3.1-py2.7.egg/pip/basecommand.py", line 139, in main
status = self.run(options, args)
File "/Users/test/venv/lib/python2.7/site-packages/pip-1.3.1-py2.7.egg/pip/commands/install.py", line 266, in run
requirement_set.prepare_files(finder, force_root_egg_info=self.bundle, bundle=self.bundle)
File "/Users/test/venv/lib/python2.7/site-packages/pip-1.3.1-py2.7.egg/pip/req.py", line 1057, in prepare_files
req_to_install.run_egg_info()
File "/Users/test/venv/lib/python2.7/site-packages/pip-1.3.1-py2.7.egg/pip/req.py", line 236, in run_egg_info
command_desc='python setup.py egg_info')
File "/Users/test/venv/lib/python2.7/site-packages/pip-1.3.1-py2.7.egg/pip/util.py", line 662, in call_subprocess
% (command_desc, proc.returncode, cwd))
InstallationError: Command python setup.py egg_info failed with error code 1 in /Users/test/venv/build/GDAL
What am I missing?
The workaround given by #user1738154 didn't work as expected for me so went ahead and installed GDAL using HomeBrew then using pip into my Virtual environment.
$ brew install gdal
(venv)$ pip install GDAL
Everything compiled and ran like a charm.
A workaround to that problem is to
Download GDAL Complete from this site
Install GDAL Complete.pkg
Go to /Library/Frameworks/GDAL.framework/Versions/1.10/ and copy all files in there
Go to your virtual environment's sites-packages /venv/lib/python2.7/site-packages and paste the copied files in there
after install gdal using these steps on host:
sudo apt-get install gdal-bin
sudo apt-get install libgdal-dev
After that use
pip install GDAL==$(gdal-config --version) --global-option=build_ext --global-option="-I/usr/include/gdal"
This should work like charm
ValueError: invalid version number '2.20.51.20100613'
I'm having problems installing pycrypto. Tried package manager: pip & easy_install, didn't work. Tried to manually install it via "python setup.py install", the same error like the above appears.
I've followed the instructions here and got stuck at installing pycrypto after installing "mingW" gcc, g++ and msys-base (MSYS shell environment)
Not really sure what to do now after several days of trying.
Here's the complete output of the error:
C:\Users\Denz\Desktop>pip install pycrypto
Downloading/unpacking pycrypto
Running setup.py egg_info for package pycrypto
Installing collected packages: pycrypto
Running setup.py install for pycrypto
Traceback (most recent call last):
File "", line 1, in ?
File "C:\Users\Denz\Desktop\build\pycrypto\setup.py", line 340, in ?
core.setup(**kw)
File "C:\Python24\lib\distutils\core.py", line 149, in setup
dist.run_commands()
File "C:\Python24\lib\distutils\dist.py", line 946, in run_commands
self.run_command(cmd)
File "C:\Python24\lib\distutils\dist.py", line 966, in run_command
cmd_obj.run()
File "c:\python24\lib\site-packages\distribute-0.6.14-py2.4.egg\setuptools
\command\install.py", line 53, in run
return _install.run(self)
File "C:\Python24\lib\distutils\command\install.py", line 506, in run
self.run_command('build')
File "C:\Python24\lib\distutils\cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "C:\Python24\lib\distutils\dist.py", line 966, in run_command
cmd_obj.run()
File "C:\Python24\lib\distutils\command\build.py", line 112, in run
self.run_command(cmd_name)
File "C:\Python24\lib\distutils\cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "C:\Python24\lib\distutils\dist.py", line 966, in run_command
cmd_obj.run()
File "C:\Python24\lib\distutils\command\build_ext.py", line 253, in run
force=self.force)
File "C:\Python24\lib\distutils\ccompiler.py", line 1177, in new_compiler
return klass (None, dry_run, force)
File "C:\Python24\lib\distutils\cygwinccompiler.py", line 292, in init
CygwinCCompiler.__init__ (self, verbose, dry_run, force)
File "C:\Python24\lib\distutils\cygwinccompiler.py", line 83, in __init__
self.gcc_version, self.ld_version, self.dllwrap_version = \
File "C:\Python24\lib\distutils\cygwinccompiler.py", line 424, in get_versions
ld_version = StrictVersion(result.group(1))
File "C:\Python24\lib\distutils\version.py", line 40, in __init__
self.parse(vstring)
File "C:\Python24\lib\distutils\version.py", line 107, in parse
raise ValueError, "invalid version number '%s'" % vstring
ValueError: invalid version number '2.20.51.20100613'
You can get working windows binaries on this page.