Pandas truncates a column width when using read_csv - python

I'm trying to open a excel .csv file using pandas, and storing it in a variable. However, it truncates one of the strings.
Excel .csv file
That's the file information, but when I check this is what i get.
Case Owner; Resolved Date/Time;Case Origin;Case Number;Status;Subject
Reinaldo Franco;10/16/2021 3:54 PM;Chat;20546561;Resolved;General Support
Catalina Sanchez;10/16/2021 5:38 AM;Chat;5625033;Resolved;Support for pay...
As you can see, it truncates where it says Support for pay..., and when I try to use to_csv() it doesn't save the entire column. So I think is a problem when reading the file, but not sure.

Since I needed to keep all the information in one cell and not separating it by columns, I was able to display all the information by maximizing the cell width by using: pd.options.display.max_colwidth = 1000 (it is 50 by def)

Related

Opening an Excel File in Python Disables Dynamic Arrays

I have an excel workbook that uses functions like OFFSET, UNIQUE, and FILTER which spill into other cells. I'm using python to analyze and write some data to the workbook, but after doing so these formulas revert into normal arrays. This means they now take up a fixed number of cells (however many they took up before opening the file in python) instead of adjusting to fit all of the data. I can revert the change by selecting the formula and hitting enter, but there are many of these formulas it's more work to fix them than to just print the data to a text file and paste it into excel manually. Is there any way to prevent this behavior?
I've been using openpyxl to open and save the workbook, but after encountering this issue also tried xlsxwriter and the dataframe to excel function from pandas. Both of them had the same issue as openpyxl. For context I am on python 3.11 and using the most recent version of these modules. I believe this issue is on the Python side and not the Excel side, so I don't think changing Excel settings will help, but maybe there is something there I missed.
Example:
I've created an empty workbook with two sheets, one called 'main' and one called 'input'. The 'main' sheet will analyze data from the 'input' sheet which will be entered with openpyxl. The data will just be values in the first column.
In cell A1 of the 'main' sheet, enter =OFFSET(input!A1,0,0,COUNTA(input!A:A),1).
This formula will just show a copy of the data. Since there currently isn't any data it gives a #REF! error, so it only takes up one cell.
Now I'll run the following python code to add the numbers 0-9 into the first column of the input sheet:
from openpyxl import load_workbook
wb = load_workbook('workbook.xlsx')
ws = wb['input']
for i in range(10):
ws.append([i])
wb.save('workbook_2.xlsx')
When opening the new file, cell A1 on the 'main' sheet only has the first value, 0, instead of the range 0--9. When selecting the cell, you can see the formula is now {=OFFSET(input!A1,0,0,COUNTA(input!A:A),1)}. The curly brackets make it an array, so it wont spill. By hitting enter in the formula the array is removed and the sheet properly becomes the full range.
If I can get this simple example to work, then expanding it to the data I'm using shouldn't be a problem.

Appending Excel cell values using pandas

Edit: I found out a solution to my question. More or less look at the user manual for openPyxl instead of online tutorials, the tutorials ran errors when I tried them (I tried more than one) and their thought process was significantly different from the thought process in the user manual. And also I ended up not using pandas as much as I thought I would need to.
I am trying to append certain values in an Excel file with multiple sheets based on user inputs and then rewrite it to the Excel file (without deleting the rest of the sheets). So far I have tried this which seems to combine the data but I didn't quite see how it applied to what I am doing since I want to append a part of a sheet instead of rewrite the whole excel file. I have also tried a few other things with ExcelWriter but I don't quite understand it since it usually wipes all the data in the file (I may be using it wrong).
episode_dataframe = pd.read_excel (r'All_excerpts (Siena Copy)_test.xlsx', sheet_name=episode)
#episode is a specified string inputted by user, this line makes a data frame for the specified sheet
episode_dataframe.loc[(int(pass_num) - 1), 'Resources'] = resources
#resources is also a user inputted string, it's what I am trying to append the spreadsheet cell value to, this appends to corresponding data frame
path_R = open("All_excerpts (Siena Copy)_test.xlsx", "rb")
with pd.ExcelWriter(path_R) as writer:
writer.book = openpyxl.load_workbook(path_R)
#I copied this from [here][3], i think it should make the writer for the to_excel? I don't fully know
episode_dataframe.to_excel(writer, sheet_name=episode, engine=openpyxl, if_sheet_exsits ='replace')
#this should write the sheet data frame onto the file, but I don't want it to delete the other sheets
Additionally, I have been running into a bunch of other smaller errors, a big one was Workbook' object has no attribute 'add worksheet' even though I'm not trying to add a worksheet, also I could not get their solution to work.
I am a bit of a novice at python, so my code might be a bit of a mess.

Renaming the columns in Vaex

I tried to read a csv file of 4GB initially with pandas pd.read_csv but my system is running out of memory (I guess) and the kernel is restarting or the system hangs.
So, I tried using vaex library to convert csv to HDF5 and do operations(aggregations,group by)on that. For that I've used:
df = vaex.from_csv('Wager-Win_April-Jul.csv',column_names = None, convert=True, chunk_size=5000000)
and
df = vaex.from_csv('Wager-Win_April-Jul.csv',header = None, convert=True, chunk_size=5000000)
But still I'm getting my first record in csv file as the header(column names to be precise)and I'm unable to change the column names. I tried finding function to change the names but didn't come across any. Pls help me on that. Thanks :)
The column names 1559104, 10289, 991... is actually the first record in the csv and somehow vaex is taking the first row as my column names which I want to avoid
vaex.from_csv is a wrapper around pandas.read_csv with few extra options for the conversion.
So reading the pandas documentation, header='infer' (which is the default) if you want the csv reader to automatically infer the column names. Otherwise the 1st row of the file is used as the header. Alternatively you can pass the column names manually via the names kwarg. Same holds true for both vaex and pandas.
I would read the pandas.read_csv documentation to better understand all the options. Then you can use those options with vaex and the convert and chunk_size arguments.

Auto-Expand Rows with xlsxwriter

When I click on the line between two rows in excel, I can autoexpand the column to the max length of any of it's rows:
When I create an Excel with xlsxwriter, is there any chance that I can prerender the excel to have all rows auto-expanded to this max-width?
I'm aware of set_column but it does not match my requirements, as you need to give it an absolute width.
This isn't possible since it isn't part of the file format. From the XlsxWriter FAQ:
Q. Is there an “AutoFit” option for columns?
Unfortunately, there is no way to specify “AutoFit” for a column in the Excel file format. This feature is only available at runtime from within Excel. It is possible to simulate “AutoFit” by tracking the width of the data in the column as your write it.

python pandas formula to dataframe

I am creating a dataframe with a bunch of calculations and adding new columns using these formulas (calculations). Then I am saving the dataframe to an Excel file.
I lose the formula after I save the file and open the file again.
For example, I am using something like:
total = 16
for s in range(total):
df_summary['Slopes(avg)' + str(s)]= df_summary[['Slope_S' + str(s)]].mean(axis=1)*df_summary['Correction1']/df_summary['Correction2'].mean(axis=1)
How can I make sure this formula appears in my excel file I write to, similar to how we have a formula in an excel worksheet?
You can write formulas to an excel file using the XlsxWriter module. Use .write_formula() https://xlsxwriter.readthedocs.org/worksheet.html#worksheet-write-formula. If you're not attached to using an excel file to store your dataframe you might want to look into using the pickle module.
import pickle
# to save
pickle.dump(df,open('saved_df.p','wb'))
# to load
df = pickle.load(open('saved_df.p','rb'))
I think my answer here may be responsive. The short of it is you need to use openpyxl (or possibly xlrd if they've added support for it) to extract the formula, and then xlsxwriter to write the formula back in. It can definitely be done.
This assumes, of course, as #jay s pointed out, that you first write Excel formulas into the DataFrame. (This solution is an alternative to pickling.)

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