I created a virtual environment using command virtualenv env on my terminal. On using pip freeze > requirements.txt after activating the virtual environment, I was a bunch of packages preinstalled.
Here is requirements.txt:
appdirs==1.4.3
CacheControl==0.12.6
certifi==2019.11.28
chardet==3.0.4
colorama==0.4.3
contextlib2==0.6.0
distlib==0.3.0
distro==1.4.0
html5lib==1.0.1
idna==2.8
ipaddr==2.2.0
lockfile==0.12.2
msgpack==0.6.2
packaging==20.3
pep517==0.8.2
progress==1.5
pyparsing==2.4.6
pytoml==0.1.21
requests==2.22.0
retrying==1.3.3
six==1.14.0
urllib3==1.25.8
webencodings==0.5.1
I haven't installed them and then, why are they there? I don't want any obsolete packages in the project which takes space and time.
Output on virtualenv env command:
created virtual environment CPython3.7.5.final.0-64 in 297ms
creator CPython3Posix(dest=/home/techmirtz/projects/Django/apps/polls/env, clear=False, global=False)
seeder FromAppData(download=False, pkg_resources=latest, requests=latest, setuptools=latest, wheel=latest, CacheControl=latest, chardet=latest, webencodings=latest, certifi=latest, distlib=latest, idna=latest, colorama=latest, distro=latest, progress=latest, msgpack=latest, pep517=latest, appdirs=latest, urllib3=latest, pip=latest, html5lib=latest, pyparsing=latest, contextlib2=latest, six=latest, lockfile=latest, packaging=latest, pytoml=latest, retrying=latest, ipaddr=latest, via=copy, app_data_dir=/home/techmirtz/.local/share/virtualenv/seed-app-data/v1.0.1.debian)
activators BashActivator,CShellActivator,FishActivator,PowerShellActivator,PythonActivator,XonshActivator
Also, I activated virtual environment by source env/bin/activate.
Then, I tried conda list:
# packages in environment at /home/techmirtz/anaconda3:
#
# Name Version Build Channel
_anaconda_depends 2019.03 py37_0
_ipyw_jlab_nb_ext_conf 0.1.0 py37_0
_libgcc_mutex 0.1 main
alabaster 0.7.12 py37_0
anaconda custom py37_1
anaconda-client 1.7.2 py37_0
anaconda-navigator 1.9.7 py37_0
anaconda-project 0.8.3 py_0
anyqt 0.0.10 py37_0
asn1crypto 0.24.0 py37_0
astroid 2.2.5 py37_0
astropy 3.2.1 py37h7b6447c_0
atomicwrites 1.3.0 py37_1
attrs 19.1.0 py37_1
babel 2.7.0 py_0
backcall 0.1.0 py37_0
backports 1.0 py_2
backports.functools_lru_cache 1.5 py_2
backports.os 0.1.1 py37_0
backports.shutil_get_terminal_size 1.0.0 py37_2
backports.tempfile 1.0 py_1
backports.weakref 1.0.post1 py_1
beautifulsoup4 4.7.1 py37_1
bitarray 0.9.3 py37h7b6447c_0
bkcharts 0.2 py37_0
blas 1.0 mkl
bleach 3.1.0 py37_0
blosc 1.16.3 hd408876_0
bokeh 1.2.0 py37_0
boto 2.49.0 py37_0
bottleneck 1.2.1 py37h035aef0_1
bzip2 1.0.8 h7b6447c_0
ca-certificates 2020.1.1 0
cairo 1.14.12 h8948797_3
certifi 2020.4.5.1 py37_0
cffi 1.12.3 py37h2e261b9_0
chardet 3.0.4 py37_1
click 7.0 py37_0
cloudpickle 1.2.1 py_0
clyent 1.2.2 py37_1
colorama 0.4.1 py37_0
conda 4.8.3 py37_0
conda-build 3.18.8 py37_0
conda-env 2.6.0 1
conda-package-handling 1.3.11 py37_0
conda-verify 3.4.2 py_1
contextlib2 0.5.5 py37_0
cryptography 2.7 py37h1ba5d50_0
curl 7.65.2 hbc83047_0
cycler 0.10.0 py37_0
cython 0.29.12 py37he6710b0_0
cytoolz 0.10.0 py37h7b6447c_0
dask 2.1.0 py_0
dask-core 2.1.0 py_0
dbus 1.13.6 h746ee38_0
decorator 4.4.0 py37_1
defusedxml 0.6.0 py_0
distributed 2.1.0 py_0
docutils 0.14 py37_0
entrypoints 0.3 py37_0
et_xmlfile 1.0.1 py37_0
expat 2.2.6 he6710b0_0
fastcache 1.1.0 py37h7b6447c_0
filelock 3.0.12 py_0
flask 1.1.1 py_0
fontconfig 2.13.0 h9420a91_0
freetype 2.9.1 h8a8886c_1
fribidi 1.0.5 h7b6447c_0
future 0.17.1 py37_0
get_terminal_size 1.0.0 haa9412d_0
gevent 1.4.0 py37h7b6447c_0
glib 2.56.2 hd408876_0
glob2 0.7 py_0
gmp 6.1.2 h6c8ec71_1
gmpy2 2.0.8 py37h10f8cd9_2
graphite2 1.3.13 h23475e2_0
graphviz 2.40.1 h21bd128_2 anaconda
greenlet 0.4.15 py37h7b6447c_0
gst-plugins-base 1.14.0 hbbd80ab_1
gstreamer 1.14.0 hb453b48_1
h5py 2.9.0 py37h7918eee_0
harfbuzz 1.8.8 hffaf4a1_0
hdf5 1.10.4 hb1b8bf9_0
heapdict 1.0.0 py37_2
html5lib 1.0.1 py37_0
icu 58.2 h9c2bf20_1
idna 2.8 py37_0
imageio 2.5.0 py37_0
imagesize 1.1.0 py37_0
importlib_metadata 0.17 py37_1
intel-openmp 2019.4 243
ipykernel 5.1.1 py37h39e3cac_0
ipython 7.6.1 py37h39e3cac_0
ipython_genutils 0.2.0 py37_0
ipywidgets 7.5.0 py_0
isort 4.3.21 py37_0
itsdangerous 1.1.0 py37_0
jbig 2.1 hdba287a_0
jdcal 1.4.1 py_0
jedi 0.13.3 py37_0
jeepney 0.4 py37_0
jinja2 2.10.1 py37_0
joblib 0.13.2 py37_0
jpeg 9b h024ee3a_2
json5 0.8.4 py_0
jsonschema 3.0.1 py37_0
jupyter 1.0.0 py37_7
jupyter_client 5.3.1 py_0
jupyter_console 6.0.0 py37_0
jupyter_core 4.5.0 py_0
jupyterlab 1.0.2 py37hf63ae98_0
jupyterlab_server 1.0.0 py_0
keyring 18.0.0 py37_0
kiwisolver 1.1.0 py37he6710b0_0
krb5 1.16.1 h173b8e3_7
lazy-object-proxy 1.4.1 py37h7b6447c_0
libarchive 3.3.3 h5d8350f_5
libcurl 7.65.2 h20c2e04_0
libedit 3.1.20181209 hc058e9b_0
libffi 3.2.1 hd88cf55_4
libgcc-ng 9.1.0 hdf63c60_0
libgfortran-ng 7.3.0 hdf63c60_0
liblief 0.9.0 h7725739_2
libpng 1.6.37 hbc83047_0
libsodium 1.0.16 h1bed415_0
libssh2 1.8.2 h1ba5d50_0
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.0.10 h2733197_2
libtool 2.4.6 h7b6447c_5
libuuid 1.0.3 h1bed415_2
libxcb 1.13 h1bed415_1
libxml2 2.9.9 hea5a465_1
libxslt 1.1.33 h7d1a2b0_0
llvmlite 0.29.0 py37hd408876_0
locket 0.2.0 py37_1
lxml 4.3.4 py37hefd8a0e_0
lz4-c 1.8.1.2 h14c3975_0
lzo 2.10 h49e0be7_2
markupsafe 1.1.1 py37h7b6447c_0
matplotlib 3.1.0 py37h5429711_0
mccabe 0.6.1 py37_1
mistune 0.8.4 py37h7b6447c_0
mkl 2019.4 243
mkl-service 2.0.2 py37h7b6447c_0
mkl_fft 1.0.12 py37ha843d7b_0
mkl_random 1.0.2 py37hd81dba3_0
mock 3.0.5 py37_0
more-itertools 7.0.0 py37_0
mpc 1.1.0 h10f8cd9_1
mpfr 4.0.1 hdf1c602_3
mpmath 1.1.0 py37_0
msgpack-python 0.6.1 py37hfd86e86_1
multipledispatch 0.6.0 py37_0
navigator-updater 0.2.1 py37_0
nbconvert 5.5.0 py_0
nbformat 4.4.0 py37_0
ncurses 6.1 he6710b0_1
networkx 2.3 py_0
nltk 3.4.4 py37_0
nose 1.3.7 py37_2
notebook 6.0.0 py37_0
numba 0.44.1 py37h962f231_0
numexpr 2.6.9 py37h9e4a6bb_0
numpy 1.16.4 py37h7e9f1db_0
numpy-base 1.16.4 py37hde5b4d6_0
numpydoc 0.9.1 py_0
olefile 0.46 py37_0
openpyxl 2.6.2 py_0
openssl 1.1.1g h7b6447c_0
packaging 19.0 py37_0
pandas 0.24.2 py37he6710b0_0
pandoc 2.2.3.2 0
pandocfilters 1.4.2 py37_1
pango 1.42.4 h049681c_0
parso 0.5.0 py_0
partd 1.0.0 py_0
patchelf 0.9 he6710b0_3
path.py 12.0.1 py_0
pathlib2 2.3.4 py37_0
patsy 0.5.1 py37_0
pcre 8.43 he6710b0_0
pep8 1.7.1 py37_0
pexpect 4.7.0 py37_0
pickleshare 0.7.5 py37_0
pillow 6.1.0 py37h34e0f95_0
pip 19.1.1 py37_0
pixman 0.38.0 h7b6447c_0
pkginfo 1.5.0.1 py37_0
pluggy 0.12.0 py_0
ply 3.11 py37_0
prometheus_client 0.7.1 py_0
prompt_toolkit 2.0.9 py37_0
psutil 5.6.3 py37h7b6447c_0
ptyprocess 0.6.0 py37_0
py 1.8.0 py37_0
py-lief 0.9.0 py37h7725739_2
pycodestyle 2.5.0 py37_0
pycosat 0.6.3 py37h14c3975_0
pycparser 2.19 py37_0
pycrypto 2.6.1 py37h14c3975_9
pycurl 7.43.0.3 py37h1ba5d50_0
pyflakes 2.1.1 py37_0
pygments 2.4.2 py_0
pylint 2.3.1 py37_0
pyodbc 4.0.26 py37he6710b0_0
pyopenssl 19.0.0 py37_0
pyparsing 2.4.0 py_0
pyqt 5.9.2 py37h05f1152_2
pyqtgraph 0.10.0 py37h28b3542_3
pyrsistent 0.14.11 py37h7b6447c_0
pysocks 1.7.0 py37_0
pytables 3.5.2 py37h71ec239_1
pytest 5.0.1 py37_0
pytest-arraydiff 0.3 py37h39e3cac_0
pytest-astropy 0.5.0 py37_0
pytest-doctestplus 0.3.0 py37_0
pytest-openfiles 0.3.2 py37_0
pytest-remotedata 0.3.1 py37_0
python 3.7.3 h0371630_0
python-dateutil 2.8.0 py37_0
python-graphviz 0.10.1 py_0
python-libarchive-c 2.8 py37_11
pytz 2019.1 py_0
pywavelets 1.0.3 py37hdd07704_1
pyyaml 5.1.1 py37h7b6447c_0
pyzmq 18.0.0 py37he6710b0_0
qt 5.9.7 h5867ecd_1
qtawesome 0.5.7 py37_1
qtconsole 4.5.1 py_0
qtpy 1.8.0 py_0
readline 7.0 h7b6447c_5
requests 2.22.0 py37_0
rope 0.14.0 py_0
ruamel_yaml 0.15.46 py37h14c3975_0
scikit-image 0.15.0 py37he6710b0_0
scikit-learn 0.21.2 py37hd81dba3_0
scipy 1.3.0 py37h7c811a0_0
seaborn 0.9.0 py37_0
secretstorage 3.1.1 py37_0
send2trash 1.5.0 py37_0
setuptools 41.0.1 py37_0
simplegeneric 0.8.1 py37_2
singledispatch 3.4.0.3 py37_0
sip 4.19.8 py37hf484d3e_0
six 1.12.0 py37_0
snappy 1.1.7 hbae5bb6_3
snowballstemmer 1.9.0 py_0
sortedcollections 1.1.2 py37_0
sortedcontainers 2.1.0 py37_0
soupsieve 1.8 py37_0
sphinx 2.1.2 py_0
sphinxcontrib 1.0 py37_1
sphinxcontrib-applehelp 1.0.1 py_0
sphinxcontrib-devhelp 1.0.1 py_0
sphinxcontrib-htmlhelp 1.0.2 py_0
sphinxcontrib-jsmath 1.0.1 py_0
sphinxcontrib-qthelp 1.0.2 py_0
sphinxcontrib-serializinghtml 1.1.3 py_0
sphinxcontrib-websupport 1.1.2 py_0
spyder 3.3.6 py37_0
spyder-kernels 0.5.1 py37_0
sqlalchemy 1.3.5 py37h7b6447c_0
sqlite 3.29.0 h7b6447c_0
statsmodels 0.10.0 py37hdd07704_0
sympy 1.4 py37_0
tbb 2019.4 hfd86e86_0
tblib 1.4.0 py_0
terminado 0.8.2 py37_0
testpath 0.4.2 py37_0
tk 8.6.8 hbc83047_0
toolz 0.10.0 py_0
tornado 6.0.3 py37h7b6447c_0
tqdm 4.32.1 py_0
traitlets 4.3.2 py37_0
unicodecsv 0.14.1 py37_0
unixodbc 2.3.7 h14c3975_0
urllib3 1.24.2 py37_0
wcwidth 0.1.7 py37_0
webencodings 0.5.1 py37_1
werkzeug 0.15.4 py_0
wheel 0.33.4 py37_0
widgetsnbextension 3.5.0 py37_0
wrapt 1.11.2 py37h7b6447c_0
wurlitzer 1.0.2 py37_0
xlrd 1.2.0 py37_0
xlsxwriter 1.1.8 py_0
xlwt 1.3.0 py37_0
xz 5.2.4 h14c3975_4
yaml 0.1.7 had09818_2
zeromq 4.3.1 he6710b0_3
zict 1.0.0 py_0
zipp 0.5.1 py_0
zlib 1.2.11 h7b6447c_3
zstd 1.3.7 h0b5b093_0
I was struggling with the same problem. New virtual environments had many unwanted packages installed, even though some of these are things that I do not even have installed with my system python or any virtual environment. At first I assumed that this must be some local configuration bug, but the list of packages installed is complete identical to the ones that you listed, so it seems more likely that this is a bug in the virtualenv package itself.
When I create a new virtualenv it contains the following libraries no matter what:
appdirs==1.4.3
CacheControl==0.12.6
certifi==2019.11.28
chardet==3.0.4
colorama==0.4.3
contextlib2==0.6.0
distlib==0.3.0
distro==1.4.0
html5lib==1.0.1
idna==2.8
ipaddr==2.2.0
lockfile==0.12.2
msgpack==0.6.2
packaging==20.3
pep517==0.8.2
progress==1.5
pyparsing==2.4.6
pytoml==0.1.21
requests==2.22.0
retrying==1.3.3
six==1.14.0
urllib3==1.25.8
webencodings==0.5.1
I wanted to know why these packages were being installed so that I could disable them, and while looking I found that these packages are all in the folder
~/.local/share/virtualenv/seed-app-data/v1.0.1.debian/3.8/wheels
Unfortunately, just removing this folder doesn't work. It's regenerated with the same content, so something else upstream is responsible for the bug. This seems likely to be a packaging error by Ubuntu or something like that.
I am on Ubuntu 20.04 with this version of virtualenv:
python3-virtualenv/focal,focal,now 20.0.17-1 all - I never had the issue while on previous versions of Ubuntu. if you have a similar platform that would help confirm the hypothesis.
If you need a workaround, I found that the following method for creating virtual environments still works without including all the unwanted packages:
python3 -m venv path/to/venv
(You'll need to run sudo apt-get install python3-venv first for this to work)
In my case, I had the same problem, created a virtual environment, and exactly appeared the same pre-installed packages within it.
Data of my system:
Python 3.8.5
Linux Mint 20.1
Note: I do not have pip installed globally on my system, only within virtual environments.
The solution that worked for me:
Unistall python3-virtualenv, including your dependencies
$ sudo apt-get remove --auto-remove python3-virtualenv
Check that there is no virtualenv installed
$ virtualenv
Should see something similar to this
Command 'virtualenv' not found, but it can be installed with:
sudo apt install python3-virtualenv
First, update. Then I install virtualenv but not with python3-virtualenv. Instead, I use
$ sudo apt-get update
$ sudo apt-get install virtualenv
The virtualenv will be installed, and the necessary dependencies of Python3 and its appropriate versions.
Now, when I create a virtual environment this is totally empty.
^ u^)b
I am trying to make a WFS request and create a GeoDataFrame (from the geopandas library) with this data. However, when I run my code, an assert raises an error:
assert len(bbox) == 4
I do not know what is causing this error, as when I print bb I get a string of four coordinates separated by a comma:
print(bb)
173600,443600,174600,444600
type(bb)
str
This is my code:
import geopandas as gpd
from requests import Request
# extract only buildings on and around WUR campus
url = 'https://geodata.nationaalgeoregister.nl/bag/wfs'
layer = 'bag:pand' # see wfs.contents
bb = ','.join(map(str, bbox)) # string of bbox needed for the request url
# Specify the parameters for fetching the data
params = dict(service='WFS', version="2.0.0", request='GetFeature',
typeName=layer, outputFormat='text/xml; subtype=gml/3.2',
srsname='urn:ogc:def:crs:EPSG::28992', bbox=bb)
# Parse the URL with parameters
q = Request('GET', url, params=params).prepare().url
# Read data from URL
BuildingsGDF = gpd.read_file(q)
The last line (BuildingsGDF = gdp.read_file(q)) throws the error from the assertion, i.e. when I try to read the result of a WFS request into a GeoDataFrame object (from the geopandas library).
I am working in a Conda environment, which has the following packages:
# packages in environment at /home/sytze/miniconda3/envs/geoscripting:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main conda-forge
affine 2.3.0 pypi_0 pypi
alabaster 0.7.12 py37_0
altair 3.2.0 py37_0 conda-forge
asn1crypto 1.2.0 py37_0 conda-forge
astroid 2.3.2 py37_0 conda-forge
attrs 19.3.0 py_0 conda-forge
babel 2.7.0 py_0 conda-forge
backcall 0.1.0 py37_0
blas 1.0 mkl conda-forge
bleach 3.1.0 py37_0
branca 0.3.1 py_0 conda-forge
bzip2 1.0.8 h7b6447c_0
ca-certificates 2019.11.27 0
cairo 1.14.12 h8948797_3
certifi 2019.11.28 py37_0
cffi 1.13.1 py37h2e261b9_0
chardet 3.0.4 py37_1003 conda-forge
click 7.0 py37_0
click-plugins 1.1.1 py_0 conda-forge
cligj 0.5.0 py37_0
cloudpickle 1.2.2 py_0 conda-forge
cryptography 2.8 py37h1ba5d50_0
curl 7.65.3 hbc83047_0
cycler 0.10.0 py37_0
dbus 1.13.12 h746ee38_0
decorator 4.4.1 py_0 conda-forge
defusedxml 0.6.0 py_0 conda-forge
descartes 1.1.0 py_3 conda-forge
docutils 0.15.2 py37_0 conda-forge
entrypoints 0.3 py37_0
expat 2.2.6 he6710b0_0
fiona 1.8.8 pypi_0 pypi
folium 0.10.0 py_0 conda-forge
fontconfig 2.13.0 h9420a91_0
freetype 2.9.1 h8a8886c_1
freexl 1.0.5 h14c3975_0
gdal 2.3.3 py37hbb2a789_0
geographiclib 1.50 py_0 conda-forge
geopandas 0.6.2 py_0 conda-forge
geopy 1.20.0 py_0 conda-forge
geos 3.7.1 he6710b0_0
giflib 5.1.4 h14c3975_1
glib 2.56.2 hd408876_0
gmp 6.1.2 h6c8ec71_1
gst-plugins-base 1.14.0 hbbd80ab_1
gstreamer 1.14.0 hb453b48_1
hdf4 4.2.13 h3ca952b_2
hdf5 1.10.4 hb1b8bf9_0
icu 58.2 h9c2bf20_1
idna 2.8 py37_0
imagesize 1.1.0 py37_0
importlib_metadata 0.23 py37_0 conda-forge
intel-openmp 2019.4 243
ipykernel 5.1.3 py37h39e3cac_0
ipython 7.9.0 py37h39e3cac_0
ipython_genutils 0.2.0 py37_0
ipywidgets 7.5.1 py_0 conda-forge
isort 4.3.21 py37_0 conda-forge
jedi 0.15.1 py37_0 conda-forge
jeepney 0.4.1 py_0 conda-forge
jinja2 2.10.3 py_0 conda-forge
jpeg 9b h024ee3a_2
json-c 0.13.1 h1bed415_0
jsonschema 3.1.1 py37_0 conda-forge
jupyter 1.0.0 py37_7
jupyter_client 5.3.4 py37_0 conda-forge
jupyter_console 6.0.0 py37_0
jupyter_core 4.6.0 py37_0
kealib 1.4.7 hd0c454d_6
keyring 18.0.0 py37_0 conda-forge
kiwisolver 1.1.0 py37he6710b0_0
krb5 1.16.1 h173b8e3_7
lazy-object-proxy 1.4.2 py37h7b6447c_0
libboost 1.67.0 h46d08c1_4
libcurl 7.65.3 h20c2e04_0
libdap4 3.19.1 h6ec2957_0
libedit 3.1.20181209 hc058e9b_0
libffi 3.2.1 hd88cf55_4
libgcc-ng 9.1.0 hdf63c60_0
libgdal 2.3.3 h2e7e64b_0
libgfortran-ng 7.3.0 hdf63c60_0
libkml 1.3.0 h590aaf7_4
libnetcdf 4.6.1 h11d0813_2
libpng 1.6.37 hbc83047_0
libpq 11.2 h20c2e04_0
libsodium 1.0.16 h1bed415_0
libspatialindex 1.8.5 h20b78c2_2
libspatialite 4.3.0a hb08deb6_19
libssh2 1.8.2 h1ba5d50_0
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.0.10 h2733197_2
libuuid 1.0.3 h1bed415_2
libxcb 1.13 h1bed415_1
libxml2 2.9.9 hea5a465_1
libxslt 1.1.33 h7d1a2b0_0
lxml 4.4.1 py37hefd8a0e_0
mapclassify 2.0.1 py_0 conda-forge
markupsafe 1.1.1 py37h7b6447c_0
matplotlib 3.1.1 py37h5429711_0
mccabe 0.6.1 py37_1
mistune 0.8.4 py37h7b6447c_0
mkl 2019.4 243
mkl-service 2.3.0 py37he904b0f_0
mkl_fft 1.0.14 py37ha843d7b_0
mkl_random 1.1.0 py37hd6b4f25_0
more-itertools 7.2.0 py37_0
munch 2.3.2 py37_0
nbconvert 5.6.0 py37_1 conda-forge
nbformat 4.4.0 py37_0
ncurses 6.1 he6710b0_1
networkx 2.4 py_0 conda-forge
notebook 6.0.1 py37_0 conda-forge
numpy 1.17.2 py37haad9e8e_0
numpy-base 1.17.2 py37hde5b4d6_0
numpydoc 0.9.1 py_0 conda-forge
openjpeg 2.3.0 h05c96fa_1
openssl 1.1.1d h7b6447c_3
osmnx 0.10 py_1 conda-forge
owslib 0.18.0 py_0 conda-forge
packaging 19.2 py_0 conda-forge
pandas 0.25.2 py37he6710b0_0
pandoc 2.2.3.2 0
pandocfilters 1.4.2 py37_1
parso 0.5.1 py_0 conda-forge
patsy 0.5.1 py37_0
pcre 8.43 he6710b0_0
pexpect 4.7.0 py37_0 conda-forge
pickleshare 0.7.5 py37_0
pip 19.3.1 py37_0 conda-forge
pixman 0.38.0 h7b6447c_0
pluggy 0.13.1 py37_0
poppler 0.65.0 h581218d_1
poppler-data 0.4.9 0 conda-forge
progressbar2 3.37.1 py37_0
proj4 5.2.0 he6710b0_1
prometheus_client 0.7.1 py_0 conda-forge
prompt_toolkit 2.0.10 py_0 conda-forge
psutil 5.6.3 py37h7b6447c_0
psycopg2 2.8.3 py37h1ba5d50_0
ptyprocess 0.6.0 py37_0 conda-forge
py 1.8.1 py_0
pycodestyle 2.5.0 py37_0
pycparser 2.19 py37_0
pyflakes 2.1.1 py37_0
pygments 2.4.2 py_0 conda-forge
pylint 2.4.3 py37_0 conda-forge
pyopenssl 19.0.0 py37_0 conda-forge
pyparsing 2.4.2 py_0 conda-forge
pyproj 1.9.6 py37h14380d9_0
pyqt 5.9.2 py37h05f1152_2
pyrsistent 0.15.4 py37h7b6447c_0
pysocks 1.7.1 py37_0 conda-forge
pytest 5.3.2 py37_0
pytest-runner 5.2 py_0
python 3.7.5 h0371630_0
python-dateutil 2.8.0 py37_0
python-utils 2.3.0 py37_0
pytz 2019.3 py_0 conda-forge
pyzmq 18.1.0 py37he6710b0_0
qt 5.9.7 h5867ecd_1
qtawesome 0.6.0 py_0 conda-forge
qtconsole 4.5.5 py_0 conda-forge
qtpy 1.9.0 py_0 conda-forge
rasterio 1.1.1 pypi_0 pypi
rasterstats 0.13.1 pypi_0 pypi
readline 7.0 h7b6447c_5
requests 2.22.0 py37_0 conda-forge
rope 0.14.0 py_0 conda-forge
rtree 0.8.3 py37_0
scipy 1.3.1 py37h7c811a0_0
seaborn 0.9.0 py37_0
secretstorage 3.1.1 py37_0 conda-forge
send2trash 1.5.0 py37_0
setuptools 41.6.0 py37_0 conda-forge
shapely 1.6.4 py37h86c5351_0
simplejson 3.17.0 pypi_0 pypi
sip 4.19.8 py37hf484d3e_0
six 1.12.0 py37_0
snowballstemmer 2.0.0 py_0 conda-forge
snuggs 1.4.7 pypi_0 pypi
sphinx 2.2.1 py_0 conda-forge
sphinxcontrib-applehelp 1.0.1 py_0 conda-forge
sphinxcontrib-devhelp 1.0.1 py_0 conda-forge
sphinxcontrib-htmlhelp 1.0.2 py_0 conda-forge
sphinxcontrib-jsmath 1.0.1 py_0 conda-forge
sphinxcontrib-qthelp 1.0.2 py_0 conda-forge
sphinxcontrib-serializinghtml 1.1.3 py_0 conda-forge
spyder 3.3.6 py37_0 conda-forge
spyder-kernels 0.5.2 py37_0 conda-forge
sqlalchemy 1.3.10 py37h7b6447c_0
sqlite 3.30.1 h7b6447c_0
statsmodels 0.10.1 py37hdd07704_0
terminado 0.8.2 py37_0 conda-forge
testpath 0.4.2 py37_0
tk 8.6.8 hbc83047_0
toolz 0.10.0 py_0 conda-forge
tornado 6.0.3 py37h7b6447c_0
traitlets 4.3.3 py37_0 conda-forge
urllib3 1.24.2 py37_0 conda-forge
vincent 0.4.4 py_1 conda-forge
wcwidth 0.1.7 py37_0
webencodings 0.5.1 py37_1
wheel 0.33.6 py37_0 conda-forge
widgetsnbextension 3.5.1 py37_0 conda-forge
wrapt 1.11.2 py37h7b6447c_0
wurlitzer 1.0.3 py37_0 conda-forge
xerces-c 3.2.2 h780794e_0
xz 5.2.4 h14c3975_4
zeromq 4.3.1 he6710b0_3
zipp 0.6.0 py_0 conda-forge
zlib 1.2.11 h7b6447c_3
zstd 1.3.7 h0b5b093_0
You don't have a list with four elements, you have a string.
To solve this, split your string to create a list before the assert, like bb = bb.split(',').
I installed geopandas using the comand conda install --channel conda-forge geopandas
Then, I try to import geopandas in my jupyter notebook.
import geopandas as gp
And I get the following error:
ImportError: dlopen(/Users/mac/anaconda3/lib/python3.7/site-packages/fiona/ogrext.cpython-37m-darwin.so, 2): Library not loaded: #rpath/libgif.7.dylib
Referenced from: /Users/mac/anaconda3/lib/libgdal.20.dylib
Reason: image not found
This is the list of installed packages
# packages in environment at /Users/mac/anaconda3:
#
# Name Version Build Channel
_anaconda_depends 2019.03 py37_0
_ipyw_jlab_nb_ext_conf 0.1.0 py37_0
alabaster 0.7.12 py37_0
anaconda custom py37_1
anaconda-client 1.7.2 py37_0
anaconda-navigator 1.9.7 py37_0
anaconda-project 0.8.3 py_0
appnope 0.1.0 py37_0
appscript 1.1.0 py37h1de35cc_0
asn1crypto 0.24.0 py37_0
astroid 2.2.5 py37_0
astropy 3.2.1 py37h1de35cc_0
atomicwrites 1.3.0 py37_1
attrs 19.1.0 py37_1
babel 2.7.0 py_0
backcall 0.1.0 py37_0
backports 1.0 py_2
backports.functools_lru_cache 1.5 py_2
backports.os 0.1.1 py37_0
backports.shutil_get_terminal_size 1.0.0 py37_2
backports.tempfile 1.0 py_1
backports.weakref 1.0.post1 py_1
beautifulsoup4 4.7.1 py37_1
bitarray 0.9.3 py37h1de35cc_0
bkcharts 0.2 py37_0
blas 1.0 mkl
bleach 3.1.0 py37_0
blosc 1.16.3 hd9629dc_0
bokeh 1.2.0 py37_0
boost-cpp 1.70.0 hd59e818_1 conda-forge
boto 2.49.0 py37_0
bottleneck 1.2.1 py37h1d22016_1
bzip2 1.0.8 h1de35cc_0
ca-certificates 2019.9.11 hecc5488_0 conda-forge
cairo 1.14.12 h9d4d9ac_1005 conda-forge
certifi 2019.9.11 py37_0 conda-forge
cffi 1.12.3 py37hb5b8e2f_0
chardet 3.0.4 py37_1
click 7.0 py37_0
click-plugins 1.1.1 py_0 conda-forge
cligj 0.5.0 py_0 conda-forge
cloudpickle 1.2.1 py_0
clyent 1.2.2 py37_1
colorama 0.4.1 py37_0
conda 4.7.12 py37_0 conda-forge
conda-build 3.18.8 py37_0
conda-env 2.6.0 1
conda-package-handling 1.3.11 py37_0
conda-verify 3.4.2 py_1
contextlib2 0.5.5 py37_0
cryptography 2.7 py37ha12b0ac_0
curl 7.65.2 ha441bb4_0
cycler 0.10.0 py37_0
cython 0.29.12 py37h0a44026_0
cytoolz 0.10.0 py37h1de35cc_0
dask 2.1.0 py_0
dask-core 2.1.0 py_0
dbus 1.13.6 h90a0687_0
decorator 4.4.0 py37_1
defusedxml 0.6.0 py_0
distributed 2.1.0 py_0
docutils 0.14 py37_0
entrypoints 0.3 py37_0
et_xmlfile 1.0.1 py37_0
expat 2.2.6 h0a44026_0
fastcache 1.1.0 py37h1de35cc_0
filelock 3.0.12 py_0
fiona 1.8.4 py37h9a122fd_0
flask 1.1.1 py_0
fontconfig 2.13.1 h1027ab8_1000 conda-forge
freetype 2.9.1 hb4e5f40_0
freexl 1.0.5 h1de35cc_1002 conda-forge
future 0.17.1 py37_0
gdal 2.3.3 py37hbe65578_0
geopandas 0.6.0 py_0 conda-forge
geos 3.7.1 h0a44026_1000 conda-forge
get_terminal_size 1.0.0 h7520d66_0
gettext 0.19.8.1 h15daf44_3
gevent 1.4.0 py37h1de35cc_0
giflib 5.1.7 h01d97ff_1 conda-forge
glib 2.56.2 hd9629dc_0
glob2 0.7 py_0
gmp 6.1.2 hb37e062_1
gmpy2 2.0.8 py37h6ef4df4_2
greenlet 0.4.15 py37h1de35cc_0
h5py 2.9.0 py37h3134771_0
hdf4 4.2.13 0 conda-forge
hdf5 1.10.4 hfa1e0ec_0
heapdict 1.0.0 py37_2
html5lib 1.0.1 py37_0
icu 58.2 h4b95b61_1
idna 2.8 py37_0
imageio 2.5.0 py37_0
imagesize 1.1.0 py37_0
importlib_metadata 0.17 py37_1
intel-openmp 2019.4 233
ipykernel 5.1.1 py37h39e3cac_0
ipython 7.6.1 py37h39e3cac_0
ipython_genutils 0.2.0 py37_0
ipywidgets 7.5.0 py_0
isort 4.3.21 py37_0
itsdangerous 1.1.0 py37_0
jbig 2.1 h4d881f8_0
jdcal 1.4.1 py_0
jedi 0.13.3 py37_0
jinja2 2.10.1 py37_0
joblib 0.13.2 py37_0
jpeg 9b he5867d9_2
json-c 0.13.1 h1de35cc_1001 conda-forge
json5 0.8.4 py_0
jsonschema 3.0.1 py37_0
jupyter 1.0.0 py37_7
jupyter_client 5.3.1 py_0
jupyter_console 6.0.0 py37_0
jupyter_core 4.5.0 py_0
jupyterlab 1.0.2 py37hf63ae98_0
jupyterlab_server 1.0.0 py_0
kealib 1.4.10 hecf890f_1003 conda-forge
keyring 18.0.0 py37_0
kiwisolver 1.1.0 py37h0a44026_0
krb5 1.16.1 hddcf347_7
lazy-object-proxy 1.4.1 py37h1de35cc_0
libarchive 3.3.3 h786848e_5
libcurl 7.65.2 h051b688_0
libcxx 4.0.1 hcfea43d_1
libcxxabi 4.0.1 hcfea43d_1
libdap4 3.19.1 h3d3e54a_0
libedit 3.1.20181209 hb402a30_0
libffi 3.2.1 h475c297_4
libgdal 2.3.3 h0950a36_0
libgfortran 3.0.1 h93005f0_2
libiconv 1.15 hdd342a3_7
libkml 1.3.0 hed7d534_1010 conda-forge
liblief 0.9.0 h2a1bed3_2
libnetcdf 4.6.1 hd5207e6_2
libpng 1.6.37 ha441bb4_0
libpq 11.2 h051b688_0
libsodium 1.0.16 h3efe00b_0
libspatialindex 1.9.0 h6de7cb9_1 conda-forge
libspatialite 4.3.0a h0cd9627_1026 conda-forge
libssh2 1.8.2 ha12b0ac_0
libtiff 4.0.10 hcb84e12_2
libxml2 2.9.9 hf6e021a_1
libxslt 1.1.33 h33a18ac_0
llvm-openmp 4.0.1 hcfea43d_1
llvmlite 0.29.0 py37h98b8051_0
locket 0.2.0 py37_1
lxml 4.3.4 py37hef8c89e_0
lz4-c 1.8.1.2 h1de35cc_0
lzo 2.10 h362108e_2
markupsafe 1.1.1 py37h1de35cc_0
matplotlib 3.1.0 py37h54f8f79_0
mccabe 0.6.1 py37_1
mistune 0.8.4 py37h1de35cc_0
mkl 2019.4 233
mkl-service 2.0.2 py37h1de35cc_0
mkl_fft 1.0.12 py37h5e564d8_0
mkl_random 1.0.2 py37h27c97d8_0
mock 3.0.5 py37_0
more-itertools 7.0.0 py37_0
mpc 1.1.0 h6ef4df4_1
mpfr 4.0.1 h3018a27_3
mpmath 1.1.0 py37_0
msgpack-python 0.6.1 py37h04f5b5a_1
multipledispatch 0.6.0 py37_0
munch 2.3.2 py_0 conda-forge
navigator-updater 0.2.1 py37_0
nbconvert 5.5.0 py_0
nbformat 4.4.0 py37_0
ncurses 6.1 h0a44026_1
networkx 2.3 py_0
nltk 3.4.4 py37_0
nose 1.3.7 py37_2
notebook 6.0.0 py37_0
numba 0.44.1 py37h6440ff4_0
numexpr 2.6.9 py37h7413580_0
numpy 1.16.4 py37hacdab7b_0
numpy-base 1.16.4 py37h6575580_0
numpydoc 0.9.1 py_0
olefile 0.46 py37_0
openjpeg 2.3.1 hdc36067_1 conda-forge
openpyxl 2.6.2 py_0
openssl 1.1.1c h01d97ff_0 conda-forge
packaging 19.0 py37_0
pandas 0.24.2 py37h0a44026_0
pandoc 2.2.3.2 0
pandocfilters 1.4.2 py37_1
parso 0.5.0 py_0
partd 1.0.0 py_0
path.py 12.0.1 py_0
pathlib2 2.3.4 py37_0
patsy 0.5.1 py37_0
pcre 8.43 h0a44026_0
pep8 1.7.1 py37_0
pexpect 4.7.0 py37_0
pickleshare 0.7.5 py37_0
pillow 6.1.0 py37hb68e598_0
pip 19.1.1 py37_0
pixman 0.34.0 h1de35cc_1003 conda-forge
pkginfo 1.5.0.1 py37_0
pluggy 0.12.0 py_0
ply 3.11 py37_0
poppler 0.65.0 ha097c24_1
poppler-data 0.4.9 1 conda-forge
proj4 5.2.0 h6de7cb9_1006 conda-forge
prometheus_client 0.7.1 py_0
prompt_toolkit 2.0.9 py37_0
psutil 5.6.3 py37h1de35cc_0
ptyprocess 0.6.0 py37_0
py 1.8.0 py37_0
py-lief 0.9.0 py37h1413db1_2
pycodestyle 2.5.0 py37_0
pycosat 0.6.3 py37h1de35cc_0
pycparser 2.19 py37_0
pycrypto 2.6.1 py37h1de35cc_9
pycurl 7.43.0.3 py37ha12b0ac_0
pyflakes 2.1.1 py37_0
pygments 2.4.2 py_0
pylint 2.3.1 py37_0
pyodbc 4.0.26 py37h0a44026_0
pyopenssl 19.0.0 py37_0
pyparsing 2.4.0 py_0
pyproj 1.9.6 py37h9c430a6_0
pyqt 5.9.2 py37h655552a_2
pyrsistent 0.14.11 py37h1de35cc_0
pysocks 1.7.0 py37_0
pytables 3.5.2 py37h5bccee9_1
pytest 5.0.1 py37_0
pytest-arraydiff 0.3 py37h39e3cac_0
pytest-astropy 0.5.0 py37_0
pytest-doctestplus 0.3.0 py37_0
pytest-openfiles 0.3.2 py37_0
pytest-remotedata 0.3.1 py37_0
python 3.7.3 h359304d_0
python-dateutil 2.8.0 py37_0
python-libarchive-c 2.8 py37_11
python.app 2 py37_9
pytz 2019.1 py_0
pywavelets 1.0.3 py37h1d22016_1
pyyaml 5.1.1 py37h1de35cc_0
pyzmq 18.0.0 py37h0a44026_0
qt 5.9.7 h468cd18_1
qtawesome 0.5.7 py37_1
qtconsole 4.5.1 py_0
qtpy 1.8.0 py_0
readline 7.0 h1de35cc_5
requests 2.22.0 py37_0
rope 0.14.0 py_0
rtree 0.8.3 py37h666c49c_1002 conda-forge
ruamel_yaml 0.15.46 py37h1de35cc_0
scikit-image 0.15.0 py37h0a44026_0
scikit-learn 0.21.2 py37h27c97d8_0
scipy 1.3.0 py37h1410ff5_0
seaborn 0.9.0 py37_0
send2trash 1.5.0 py37_0
setuptools 41.0.1 py37_0
shapely 1.6.4 py37h79c6f3e_1005 conda-forge
simplegeneric 0.8.1 py37_2
singledispatch 3.4.0.3 py37_0
sip 4.19.8 py37h0a44026_0
six 1.12.0 py37_0
snappy 1.1.7 he62c110_3
snowballstemmer 1.9.0 py_0
sortedcollections 1.1.2 py37_0
sortedcontainers 2.1.0 py37_0
soupsieve 1.8 py37_0
sphinx 2.1.2 py_0
sphinxcontrib 1.0 py37_1
sphinxcontrib-applehelp 1.0.1 py_0
sphinxcontrib-devhelp 1.0.1 py_0
sphinxcontrib-htmlhelp 1.0.2 py_0
sphinxcontrib-jsmath 1.0.1 py_0
sphinxcontrib-qthelp 1.0.2 py_0
sphinxcontrib-serializinghtml 1.1.3 py_0
sphinxcontrib-websupport 1.1.2 py_0
spyder 3.3.6 py37_0
spyder-kernels 0.5.1 py37_0
sqlalchemy 1.3.5 py37h1de35cc_0
sqlite 3.29.0 ha441bb4_0
statsmodels 0.10.0 py37h1d22016_0
sympy 1.4 py37_0
tbb 2019.8 h770b8ee_0 conda-forge
tblib 1.4.0 py_0
terminado 0.8.2 py37_0
testpath 0.4.2 py37_0
tk 8.6.8 ha441bb4_0
toolz 0.10.0 py_0
tornado 6.0.3 py37h1de35cc_0
tqdm 4.32.1 py_0
traitlets 4.3.2 py37_0
unicodecsv 0.14.1 py37_0
unixodbc 2.3.7 h1de35cc_0
urllib3 1.24.2 py37_0
wcwidth 0.1.7 py37_0
webencodings 0.5.1 py37_1
werkzeug 0.15.4 py_0
wheel 0.33.4 py37_0
widgetsnbextension 3.5.0 py37_0
wrapt 1.11.2 py37h1de35cc_0
wurlitzer 1.0.2 py37_0
xerces-c 3.2.2 h4db8090_1003 conda-forge
xlrd 1.2.0 py37_0
xlsxwriter 1.1.8 py_0
xlwings 0.15.8 py37_0
xlwt 1.3.0 py37_0
xz 5.2.4 h1de35cc_4
yaml 0.1.7 hc338f04_2
zeromq 4.3.1 h0a44026_3
zict 1.0.0 py_0
zipp 0.5.1 py_0
zlib 1.2.11 h1de35cc_3
zstd 1.3.7 h5bba6e5_0
I have tried fixing it using conda config --set channel_priority strict and my .condarc file looks like this:
channels: [conda-forge, defaults]
channel_priority: strict
Yet the problem persists. How do I fix this?
I'm working with an environment named gcloud, with many google APIs packages installed. I wanted to export said environment to install it elsewhere, but when I do that I get a very useless .yml file. I run:
conda activate gcloud
conda env export > gcloudenv.yml
Which brings this:
name: gcloud
channels:
- defaults
prefix: C:\Users\usr\Anaconda3\envs\gcloud\envs\gcloud
So there's no libraries listed, even though I have installed many. What could be happening?
This is conda list's output:
# packages in environment at C:\Users\jeco_\Anaconda3\envs\gcloud:
#
# Name Version Build Channel
alabaster 0.7.12 py37_0
asn1crypto 0.24.0 py37_0
astroid 2.2.5 py37_0
attrs 19.1.0 py37_1
babel 2.7.0 py_0
backcall 0.1.0 py37_0
beautifulsoup4 4.7.1 py37_1
bleach 3.1.0 py37_0
bzip2 1.0.7 he774522_0
ca-certificates 2019.6.16 hecc5488_0 conda-forge
cachetools 2.1.0 py_0 conda-forge
certifi 2019.6.16 py37_1 conda-forge
cffi 1.12.3 py37h7a1dbc1_0
chardet 3.0.4 py37_1
cloudpickle 1.2.1 py_0
colorama 0.4.1 py37_0
conda 4.7.5 py37_0 conda-forge
conda-build 3.18.7 py37_0
conda-package-handling 1.3.11 py37_0
cryptography 2.7 py37h7a1dbc1_0
decorator 4.4.0 py37_1
defusedxml 0.6.0 py_0
docutils 0.14 py37_0
entrypoints 0.3 py37_0
filelock 3.0.12 py_0
glob2 0.7 py_0
google-api-core 1.13.0 py37h21ff451_0 conda-forge
google-api-python-client 1.7.9 py_0 conda-forge
google-auth 1.6.3 py_0 conda-forge
google-auth-httplib2 0.0.3 py_2 conda-forge
google-cloud-core 1.0.2 py_0 conda-forge
google-cloud-storage 1.16.1 py_0 conda-forge
google-resumable-media 0.3.2 py_0 conda-forge
googleapis-common-protos 1.6.0 py37h21ff451_0 conda-forge
httplib2 0.13.0 py37_0 conda-forge
icu 58.2 ha66f8fd_1
idna 2.8 py37_0
imagesize 1.1.0 py37_0
ipykernel 5.1.1 py37h39e3cac_0
ipython 7.6.1 py37h39e3cac_0
ipython_genutils 0.2.0 py37_0
isort 4.3.21 py37_0
jedi 0.13.3 py37_0
jinja2 2.10.1 py37_0
jpeg 9b hb83a4c4_2
jsonschema 3.0.1 py37_0
jupyter_client 5.2.4 py37_0
jupyter_core 4.5.0 py_0
keyring 18.0.0 py37_0
lazy-object-proxy 1.4.1 py37he774522_0
libarchive 3.3.3 h0643e63_5
libiconv 1.15 h1df5818_7
liblief 0.9.0 ha925a31_2
libpng 1.6.37 h2a8f88b_0
libprotobuf 3.9.0 h1a1b453_0 conda-forge
libsodium 1.0.16 h9d3ae62_0
libxml2 2.9.9 h464c3ec_0
lz4-c 1.8.1.2 h2fa13f4_0
lzo 2.10 h6df0209_2
markupsafe 1.1.1 py37he774522_0
mccabe 0.6.1 py37_1
menuinst 1.4.16 py37he774522_0
mistune 0.8.4 py37he774522_0
nbconvert 5.5.0 py_0
nbformat 4.4.0 py37_0
numpydoc 0.9.1 py_0
openssl 1.1.1c hfa6e2cd_0 conda-forge
packaging 19.0 py37_0
pandoc 2.2.3.2 0
pandocfilters 1.4.2 py37_1
parso 0.5.0 py_0
pickleshare 0.7.5 py37_0
pip 19.1.1 py37_0
pkginfo 1.5.0.1 py37_0
prompt_toolkit 2.0.9 py37_0
protobuf 3.9.0 py37he025d50_0 conda-forge
psutil 5.6.3 py37he774522_0
py-lief 0.9.0 py37ha925a31_2
pyasn1 0.4.5 py_0 conda-forge
pyasn1-modules 0.2.5 py_0 conda-forge
pycodestyle 2.5.0 py37_0
pycosat 0.6.3 py37hfa6e2cd_0
pycparser 2.19 py37_0
pyflakes 2.1.1 py37_0
pygments 2.4.2 py_0
pylint 2.3.1 py37_0
pyopenssl 19.0.0 py37_0
pyparsing 2.4.0 py_0
pyqt 5.9.2 py37h6538335_2
pyrsistent 0.14.11 py37he774522_0
pysocks 1.7.0 py37_0
python 3.7.3 h8c8aaf0_1
python-dateutil 2.8.0 py37_0
python-libarchive-c 2.8 py37_10
pytz 2019.1 py_0
pywin32 223 py37hfa6e2cd_1
pyyaml 5.1.1 py37he774522_0
pyzmq 18.0.0 py37ha925a31_0
qt 5.9.7 vc14h73c81de_0
qtawesome 0.5.7 py37_1
qtconsole 4.5.1 py_0
qtpy 1.8.0 py_0
requests 2.22.0 py37_0
rope 0.14.0 py_0
rsa 3.4.2 py_1 conda-forge
ruamel_yaml 0.15.46 py37hfa6e2cd_0
setuptools 41.0.1 py37_0
simplejson 3.16.0 py37hfa6e2cd_0
sip 4.19.8 py37h6538335_0
six 1.12.0 py37_0
snowballstemmer 1.9.0 py_0
soupsieve 1.8 py37_0
sphinx 2.1.2 py_0
sphinxcontrib-applehelp 1.0.1 py_0
sphinxcontrib-devhelp 1.0.1 py_0
sphinxcontrib-htmlhelp 1.0.2 py_0
sphinxcontrib-jsmath 1.0.1 py_0
sphinxcontrib-qthelp 1.0.2 py_0
sphinxcontrib-serializinghtml 1.1.3 py_0
spyder 3.3.4 py37_0
spyder-kernels 0.5.0 py37_0
sqlite 3.28.0 he774522_0
testpath 0.4.2 py37_0
tornado 6.0.3 py37he774522_0
tqdm 4.32.1 py_0
traitlets 4.3.2 py37_0
uritemplate 3.0.0 py_1 conda-forge
urllib3 1.24.2 py37_0
vc 14.1 h0510ff6_4
vs2015_runtime 14.15.26706 h3a45250_4
wcwidth 0.1.7 py37_0
webencodings 0.5.1 py37_1
wheel 0.33.4 py37_0
win_inet_pton 1.1.0 py37_0
wincertstore 0.2 py37_0
wrapt 1.11.2 py37he774522_0
xz 5.2.4 h2fa13f4_4
yaml 0.1.7 hc54c509_2
zeromq 4.3.1 h33f27b4_3
zlib 1.2.11 h62dcd97_3
zstd 1.3.7 h508b16e_0
When starting Anaconda it gets stuck on 'loading applications'
Here's what's displayed when running: conda info
active environment : None
user config file : /Users/ryanovsienko/.condarc
populated config files : /Users/ryanovsienko/.condarc
conda version : 4.6.7
conda-build version : 3.17.8
python version : 3.6.8.final.0
base environment : /Users/ryanovsienko/anaconda (writable)
channel URLs : https://repo.anaconda.com/pkgs/main/osx-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/free/osx-64
https://repo.anaconda.com/pkgs/free/noarch
https://repo.anaconda.com/pkgs/r/osx-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /Users/ryanovsienko/anaconda/pkgs
/Users/ryanovsienko/.conda/pkgs
envs directories : /Users/ryanovsienko/anaconda/envs
/Users/ryanovsienko/.conda/envs
platform : osx-64
user-agent : conda/4.6.7 requests/2.21.0 CPython/3.6.8 Darwin/18.2.0 OSX/10.14.3
UID:GID : 501:20
netrc file : None
offline mode : False
Here the output from:
conda list
# packages in environment at /Users/ryanovsienko/anaconda:
#
# Name Version Build Channel
_license 1.1 py36_1
alabaster 0.7.12 py36_0
anaconda custom py36ha4fed55_0
anaconda-client 1.7.2 py36_0
anaconda-navigator 1.9.6 py36_0
anaconda-project 0.8.2 py36_0
appnope 0.1.0 py36hf537a9a_0
appscript 1.1.0 py36h1de35cc_0
asn1crypto 0.24.0 py36_0
astroid 2.1.0 py36_0
astropy 3.1.2 py36h1de35cc_0
atomicwrites 1.3.0 py_0
attrs 18.2.0 py36h28b3542_0
babel 2.6.0 py36_0
backcall 0.1.0 py36_0
backports 1.0 py36_1
backports.os 0.1.1 py36_0
backports.shutil_get_terminal_size 1.0.0 py36_2
basemap 1.2.0 py36h0acbc05_0
beautifulsoup4 4.7.1 py36_1
bitarray 0.8.3 py36h1de35cc_0
bkcharts 0.2 py36h073222e_0
blas 1.0 mkl
blaze 0.11.3 py36h02e7a37_0
bleach 3.1.0 py36_0
bokeh 1.0.4 py36_0
boto 2.49.0 py36_0
bottleneck 1.2.1 py36h1d22016_1
bzip2 1.0.6 h1de35cc_5
ca-certificates 2019.1.23 0
certifi 2018.11.29 py36_0
cffi 1.12.1 py36hb5b8e2f_0
chardet 3.0.4 py36_1
click 7.0 py36_0
cloudpickle 0.8.0 py36_0
clyent 1.2.2 py36_1
colorama 0.4.1 py36_0
conda 4.6.7 py36_0
conda-build 3.17.8 py36_0
conda-env 2.6.0 1
conda-verify 3.1.1 py36_0
contextlib2 0.5.5 py36hd66e5e7_0
cryptography 2.5 py36ha12b0ac_0
curl 7.63.0 ha441bb4_1000
cycler 0.10.0 py36hfc81398_0
cython 0.29.5 py36h0a44026_0
cytoolz 0.9.0.1 py36h1de35cc_1
dask 0.16.1 py36_0
dask-core 1.1.2 py_0
datashape 0.5.4 py36_1
dbus 1.13.6 h90a0687_0
decorator 4.3.2 py36_0
distributed 1.26.0 py36_0
django 2.1.5 pypi_0 pypi
docutils 0.14 py36hbfde631_0
ecdsa 0.13 pypi_0 pypi
entrypoints 0.3 py36_0
et_xmlfile 1.0.1 py36h1315bdc_0
expat 2.2.6 h0a44026_0
fastcache 1.0.2 py36h1de35cc_2
filelock 3.0.10 py36_0
flask 1.0.2 py36_1
flask-cors 3.0.7 py36_0
freetype 2.9.1 hb4e5f40_0
future 0.17.1 py36_0
geckodriver 0.20.1 hfc679d8_1 conda forge
geos 3.6.2 h5470d99_2
get_terminal_size 1.0.0 h7520d66_0
gettext 0.19.8.1 h15daf44_3
gevent 1.4.0 py36h1de35cc_0
git 2.20.1 pl526h6951d83_0
glib 2.56.2 hd9629dc_0
glob2 0.6 py36_1
gmp 6.1.2 hb37e062_1
gmpy2 2.0.8 py36h6ef4df4_2
greenlet 0.4.15 py36h1de35cc_0
h5py 2.7.1 py36h39cdac5_0
hdf5 1.10.4 hfa1e0ec_0
heapdict 1.0.0 py36_2
html5lib 1.0.1 py36_0
icu 58.2 h4b95b61_1
idna 2.8 py36_0
imageio 2.5.0 py36_0
imagesize 1.1.0 py36_0
importlib_metadata 0.7 py36_0
inflection 0.3.1 py36_1
intel-openmp 2019.1 144
ipykernel 5.1.0 py36h39e3cac_0
ipython 7.3.0 py36h39e3cac_0
ipython_genutils 0.2.0 py36h241746c_0
ipywidgets 7.4.2 py36_0
isort 4.3.8 py36_0
itsdangerous 1.1.0 py36_0
jbig 2.1 h4d881f8_0
jdcal 1.4 py36_0
jedi 0.13.3 py36_0
jinja2 2.10 py36_0
jose 1.0.0 pypi_0 pypi
jpeg 9b he5867d9_2
jsonpickle 0.9.5 pypi_0 pypi
jsonschema 2.6.0 py36hb385e00_0
jupyter 1.0.0 py36_7
jupyter_client 5.2.4 py36_0
jupyter_console 6.0.0 py36_0
jupyter_core 4.4.0 py36_0
jupyterlab 0.35.3 py36_0
jupyterlab_launcher 0.13.1 py36_0
jupyterlab_server 0.2.0 py36_0
jupyterthemes 0.19.1 pypi_0 pypi
keyring 18.0.0 py36_0
kiwisolver 1.0.1 py36h0a44026_0
krb5 1.16.1 hddcf347_7
lazy-object-proxy 1.3.1 py36h1de35cc_2
lesscpy 0.13.0 pypi_0 pypi
libarchive 3.3.3 h786848e_5
libcurl 7.63.0 h051b688_1000
libcxx 4.0.1 hcfea43d_1
libcxxabi 4.0.1 hcfea43d_1
libedit 3.1.20181209 hb402a30_0
libffi 3.2.1 h475c297_4
libgfortran 3.0.1 h93005f0_2
libiconv 1.15 hdd342a3_7
liblief 0.9.0 h2a1bed3_2
libpng 1.6.36 ha441bb4_0
libsodium 1.0.16 h3efe00b_0
libssh2 1.8.0 ha12b0ac_4
libtiff 4.0.10 hcb84e12_2
libxml2 2.9.9 hab757c2_0
libxslt 1.1.33 h33a18ac_0
llvmlite 0.27.0 py36h8c7ce04_0
locket 0.2.0 py36hca03003_1
lxml 4.3.1 py36hef8c89e_0
lz4-c 1.8.1.2 h1de35cc_0
lzo 2.10 h362108e_2
markupsafe 1.1.1 py36h1de35cc_0
matplotlib 3.0.2 py36h54f8f79_0
mccabe 0.6.1 py36_1
mistune 0.8.4 py36h1de35cc_0
mkl 2019.1 144
mkl-service 1.1.2 py36h6b9c3cc_5
mkl_fft 1.0.10 py36h5e564d8_0
mkl_random 1.0.2 py36h27c97d8_0
more-itertools 5.0.0 py36_0
mpc 1.1.0 h6ef4df4_1
mpfr 4.0.1 h3018a27_3
mpmath 1.1.0 py36_0
msgpack-python 0.6.1 py36h04f5b5a_1
multipledispatch 0.6.0 py36_0
navigator-updater 0.2.1 py36_0
nbconvert 5.3.1 py36_0
nbformat 4.4.0 py36h827af21_0
ncurses 6.1 h0a44026_1
networkx 2.2 py36_1
nltk 3.4 py36_1
nose 1.3.7 py36_2
notebook 5.7.4 py36_0
numba 0.36.2 np114py36hc2f221f_0
numexpr 2.6.4 py36habcfcfe_0
numpy 1.15.4 py36hacdab7b_0
numpy-base 1.15.4 py36h6575580_0
numpydoc 0.8.0 py36_0
oauthlib 3.0.1 pypi_0 pypi
odo 0.5.1 py36hc1af34a_0
olefile 0.46 py36_0
openpyxl 2.6.0 py36_0
openssl 1.1.1b h1de35cc_0
packaging 19.0 py36_0
pandas 0.24.1 py36h0a44026_0
pandas-datareader 0.7.0 py36_0
pandoc 2.2.3.2 0
pandocfilters 1.4.2 py36_1
parso 0.3.4 py36_0
partd 0.3.9 py36_0
path.py 11.5.0 py36_0
pathlib2 2.3.3 py36_0
patsy 0.5.0 py36_0
pcre 8.42 h378b8a2_0
pep8 1.7.1 py36_0
perl 5.26.2 h4e221da_0
pexpect 4.6.0 py36_0
pickleshare 0.7.5 py36_0
pillow 5.4.1 py36hb68e598_0
pip 18.0 pypi_0 pypi
pkginfo 1.5.0.1 py36_0
pluggy 0.9.0 py36_0
ply 3.11 py36_0
proj4 5.2.0 h0a44026_1
prometheus_client 0.6.0 py36_0
prompt_toolkit 2.0.9 py36_0
psutil 5.5.0 py36h1de35cc_0
ptyprocess 0.6.0 py36_0
py 1.8.0 py36_0
py-lief 0.9.0 py36h1413db1_2
pycodestyle 2.5.0 py36_0
pycosat 0.6.3 py36h1de35cc_0
pycparser 2.19 py36_0
pycrypto 2.6.1 py36h1de35cc_9
pycryptodome 3.7.3 pypi_0 pypi
pycurl 7.43.0.2 py36ha12b0ac_0
pyflakes 2.1.0 py36_0
pygments 2.3.1 py36_0
pylint 2.2.2 py36_0
pyodbc 4.0.26 py36h0a44026_0
pyopenssl 19.0.0 py36_0
pyparsing 2.3.1 py36_0
pyperclip 1.5.27 py36_0 bryanwweber
pyproj 1.9.6 py36h9c430a6_0
pyqt 5.9.2 py36h655552a_2
pyqt5 5.12 pypi_0 pypi
pyqt5-sip 4.19.14 pypi_0 pypi
pyshp 2.0.1 py36_0
pysocks 1.6.8 py36_0
pytables 3.4.2 py36hfbd7ab0_2
pytest 4.3.0 py36_0
pytest-arraydiff 0.3 py36h39e3cac_0
pytest-astropy 0.5.0 py36_0
pytest-doctestplus 0.2.0 py36_0
pytest-openfiles 0.3.2 py36_0
pytest-remotedata 0.3.1 py36_0
python 3.6.8 haf84260_0
python-dateutil 2.8.0 py36_0
python-jose 2.0.2 pypi_0 pypi
python-libarchive-c 2.8 py36_6
python-oauth2 1.1.0 py36h28b3542_1
python-quickbooks 0.7.4 pypi_0 pypi
python.app 2 py36_9
pytz 2018.9 py36_0
pywavelets 1.0.1 py36h1d22016_0
pyyaml 3.13 py36h1de35cc_0
pyzmq 18.0.0 py36h0a44026_0
qt 5.9.7 h468cd18_1
qtawesome 0.5.6 py_0
qtconsole 4.4.3 py36_0
qtpy 1.6.0 py_0
quandl 3.4.5 py36_0
rauth 0.7.3 pypi_0 pypi
readline 7.0 h1de35cc_5
requests 2.13.0 pypi_0 pypi
requests-file 1.4.3 py36_0
requests-ftp 0.3.1 py36_1
requests-oauthlib 0.8.0 pypi_0 pypi
rope 0.12.0 py36_0
ruamel_yaml 0.15.46 py36h1de35cc_0
scikit-image 0.13.1 py36h1de35cc_1
scikit-learn 0.19.1 py36hffbff8c_0
scipy 1.0.0 py36h1de22e9_0
seaborn 0.8.1 py36h595ecd9_0
selenium 3.141.0 py36h1de35cc_0
send2trash 1.5.0 py36_0
setuptools 40.8.0 py36_0
simplegeneric 0.8.1 py36_2
simplejson 3.15.0 pypi_0 pypi
singledispatch 3.4.0.3 py36hf20db9d_0
sip 4.19.8 py36h0a44026_0
six 1.12.0 py36_0
snowballstemmer 1.2.1 py36h6c7b616_0
sortedcollections 1.1.2 py36_0
sortedcontainers 2.1.0 py36_0
soupsieve 1.7.1 py36_0
sphinx 1.8.4 py36_0
sphinxcontrib 1.0 py36_1
sphinxcontrib-websupport 1.1.0 py36_1
spyder 3.3.3 py36_0
spyder-kernels 0.4.2 py36_0
sqlalchemy 1.2.18 py36h1de35cc_0
sqlite 3.26.0 ha441bb4_0
statsmodels 0.8.0 py36h9c68fc9_0
strict-rfc3339 0.7 pypi_0 pypi
sympy 1.3 py36_0
tblib 1.3.2 py36hda67792_0
terminado 0.8.1 py36_1
testpath 0.4.2 py36_0
tk 8.6.8 ha441bb4_0
toolz 0.9.0 py36_0
tornado 5.1.1 py36h1de35cc_0
tqdm 4.31.1 py_0
traitlets 4.3.2 py36h65bd3ce_0
typed-ast 1.3.1 py36h1de35cc_0
typing 3.6.4 py36_0
unicodecsv 0.14.1 py36he531d66_0
unixodbc 2.3.7 h1de35cc_0
urllib3 1.24.1 py36_0
wcwidth 0.1.7 py36h8c6ec74_0
webencodings 0.5.1 py36_1
werkzeug 0.14.1 py36_0
wheel 0.33.1 py36_0
widgetsnbextension 3.4.2 py36_0
wrapt 1.11.1 py36h1de35cc_0
wurlitzer 1.0.2 py36_0
xlrd 1.2.0 py36_0
xlsxwriter 1.1.5 py36_0
xlwings 0.15.3 py36_0
xlwt 1.2.0 py36h5ad1178_0
xz 5.2.4 h1de35cc_4
yaml 0.1.7 hc338f04_2
zeromq 4.3.1 h0a44026_3
zict 0.1.3 py36_0
zlib 1.2.11 h1de35cc_3
zstd 1.3.7 h5bba6e5_0
have tried
conda update conda
conda update --all
conda update anaconda-navigator
conda update python.app
conda update anaconda-client
anaconda-navigator --reset
conda update navigator-updater
conda update launcher
Not sure what else to try
Not sure what happened, just started working again. sigh