Let's say I have a NumPy array:
x = np.array([0, 1, 2, 0, 4, 5, 6, 7, 0, 0])
At each index, I want to find the distance to nearest zero value. If the position is a zero itself then return zero as a distance. Afterward, we are only interested in distances to the nearest zero that is to the right of the current position. The super naive approach would be something like:
out = np.full(x.shape[0], x.shape[0]-1)
for i in range(x.shape[0]):
j = 0
while i + j < x.shape[0]:
if x[i+j] == 0:
break
j += 1
out[i] = j
And the output would be:
array([0, 2, 1, 0, 4, 3, 2, 1, 0, 0])
I'm noticing a countdown/decrement pattern in the output in between the zeros. So, I might be able to do use the locations of the zeros (i.e., zero_indices = np.argwhere(x == 0).flatten())
What is the fastest way to get the desired output in linear time?
Approach #1 : Searchsorted to the rescue for linear-time in a vectorized manner (before numba guys come in)!
mask_z = x==0
idx_z = np.flatnonzero(mask_z)
idx_nz = np.flatnonzero(~mask_z)
# Cover for the case when there's no 0 left to the right
# (for same results as with posted loop-based solution)
if x[-1]!=0:
idx_z = np.r_[idx_z,len(x)]
out = np.zeros(len(x), dtype=int)
idx = np.searchsorted(idx_z, idx_nz)
out[~mask_z] = idx_z[idx] - idx_nz
Approach #2 : Another with some cumsum -
mask_z = x==0
idx_z = np.flatnonzero(mask_z)
# Cover for the case when there's no 0 left to the right
if x[-1]!=0:
idx_z = np.r_[idx_z,len(x)]
out = idx_z[np.r_[False,mask_z[:-1]].cumsum()] - np.arange(len(x))
Alternatively, last step of cumsum could be replaced by repeat functionality -
r = np.r_[idx_z[0]+1,np.diff(idx_z)]
out = np.repeat(idx_z,r)[:len(x)] - np.arange(len(x))
Approach #3 : Another with mostly just cumsum -
mask_z = x==0
idx_z = np.flatnonzero(mask_z)
pp = np.full(len(x), -1)
pp[idx_z[:-1]] = np.diff(idx_z) - 1
if idx_z[0]==0:
pp[0] = idx_z[1]
else:
pp[0] = idx_z[0]
out = pp.cumsum()
# Handle boundary case and assigns 0s at original 0s places
out[idx_z[-1]:] = np.arange(len(x)-idx_z[-1],0,-1)
out[mask_z] = 0
You could work from the other side. Keep a counter on how many non zero digits have passed and assign it to the element in the array. If you see 0, reset the counter to 0
Edit: if there is no zero on the right, then you need another check
x = np.array([0, 1, 2, 0, 4, 5, 6, 7, 0, 0])
out = x
count = 0
hasZero = False
for i in range(x.shape[0]-1,-1,-1):
if out[i] != 0:
if not hasZero:
out[i] = x.shape[0]-1
else:
count += 1
out[i] = count
else:
hasZero = True
count = 0
print(out)
You can use the difference between the indices of each position and the cumulative max of zero positions to determine the distance to the preceding zero. This can be done forward and backward. The minimum between forward and backward distance to the preceding (or next) zero will be the nearest:
import numpy as np
indices = np.arange(x.size)
zeroes = x==0
forward = indices - np.maximum.accumulate(indices*zeroes) # forward distance
forward[np.cumsum(zeroes)==0] = x.size-1 # handle absence of zero from edge
forward = forward * (x!=0) # set zero positions to zero
zeroes = zeroes[::-1]
backward = indices - np.maximum.accumulate(indices*zeroes) # backward distance
backward[np.cumsum(zeroes)==0] = x.size-1 # handle absence of zero from edge
backward = backward[::-1] * (x!=0) # set zero positions to zero
distZero = np.minimum(forward,backward) # closest distance (minimum)
results:
distZero
# [0, 1, 1, 0, 1, 2, 2, 1, 0, 0]
forward
# [0, 1, 2, 0, 1, 2, 3, 4, 0, 0]
backward
# [0, 2, 1, 0, 4, 3, 2, 1, 0, 0]
Special case where no zeroes are present on outer edges:
x = np.array([3, 1, 2, 0, 4, 5, 6, 0,8,8])
forward: [9 9 9 0 1 2 3 0 1 2]
backward: [3 2 1 0 3 2 1 0 9 9]
distZero: [3 2 1 0 1 2 1 0 1 2]
also works with no zeroes at all
[EDIT] non-numpy solutions ...
if you're looking for an O(N) solution that doesn't require numpy, you can apply this strategy using the accumulate function from itertools:
x = [0, 1, 2, 0, 4, 5, 6, 7, 0, 0]
from itertools import accumulate
maxDist = len(x) - 1
zeroes = [maxDist*(v!=0) for v in x]
forward = [*accumulate(zeroes,lambda d,v:min(maxDist,(d+1)*(v!=0)))]
backward = accumulate(zeroes[::-1],lambda d,v:min(maxDist,(d+1)*(v!=0)))
backward = [*backward][::-1]
distZero = [min(f,b) for f,b in zip(forward,backward)]
print("x",x)
print("f",forward)
print("b",backward)
print("d",distZero)
output:
x [0, 1, 2, 0, 4, 5, 6, 7, 0, 0]
f [0, 1, 2, 0, 1, 2, 3, 4, 0, 0]
b [0, 2, 1, 0, 4, 3, 2, 1, 0, 0]
d [0, 1, 1, 0, 1, 2, 2, 1, 0, 0]
If you don't want to use any library, you can accumulate the distances manually in a loop:
x = [0, 1, 2, 0, 4, 5, 6, 7, 0, 0]
forward,backward = [],[]
fDist = bDist = maxDist = len(x)-1
for f,b in zip(x,reversed(x)):
fDist = min(maxDist,(fDist+1)*(f!=0))
forward.append(fDist)
bDist = min(maxDist,(bDist+1)*(b!=0))
backward.append(bDist)
backward = backward[::-1]
distZero = [min(f,b) for f,b in zip(forward,backward)]
print("x",x)
print("f",forward)
print("b",backward)
print("d",distZero)
output:
x [0, 1, 2, 0, 4, 5, 6, 7, 0, 0]
f [0, 1, 2, 0, 1, 2, 3, 4, 0, 0]
b [0, 2, 1, 0, 4, 3, 2, 1, 0, 0]
d [0, 1, 1, 0, 1, 2, 2, 1, 0, 0]
My first intuition would be to use slicing. If x can be a normal list instead of a numpy array, then you could use
out = [x[i:].index(0) for i,_ in enumerate(x)]
if numpy is necessary then you can use
out = [np.where(x[i:]==0)[0][0] for i,_ in enumerate(x)]
but this is less efficient because you are finding all zero locations to the right of the value and then pulling out just the first. Almost definitely a better way to do this in numpy.
Edit: I am sorry, I misunderstood. This will give you the distance to the nearest zeros - may it be at left or right. But you can use d_right as intermediate result. This does not cover the edge case of not having any zero to the right though.
import numpy as np
x = np.array([0, 1, 2, 0, 4, 5, 6, 7, 0, 0])
# Get the distance to the closest zero from the left:
zeros = x == 0
zero_locations = np.argwhere(x == 0).flatten()
zero_distances = np.diff(np.insert(zero_locations, 0, 0))
temp = x.copy()
temp[~zeros] = 1
temp[zeros] = -(zero_distances-1)
d_left = np.cumsum(temp) - 1
# Get the distance to the closest zero from the right:
zeros = x[::-1] == 0
zero_locations = np.argwhere(x[::-1] == 0).flatten()
zero_distances = np.diff(np.insert(zero_locations, 0, 0))
temp = x.copy()
temp[~zeros] = 1
temp[zeros] = -(zero_distances-1)
d_right = np.cumsum(temp) - 1
d_right = d_right[::-1]
# Get the smallest distance from both sides:
smallest_distances = np.min(np.stack([d_left, d_right]), axis=0)
# np.array([0, 1, 1, 0, 1, 2, 2, 1, 0, 0])
Related
I'm trying to automate a trading strategy which should enter/exit a long position when the current price is the minimum/maximum among the previous k prices.
The result should contain 1 if the current number is maximum among previous k numbers, -1 if it is the minimum and 0 if none of the conditions are true.
For example if k = 3 and the numpyp array = [1, 2, 3, 2, 1, 6], the result should be an array like:
[0, 0, 1, 0, -1, 1].
I tried the numpy's max function but don't know how to take into account the previous k numbers instead of fixed index and how to switch to default condition for the first k - 1 numbers which should be 0 since there are not k number available to compare them with.
I will use Pandas
import pandas as pd
array = [1, 2, 3, 2, 1, 6]
df = pd.DataFrame(array)
df['rolling_max'] = df[0].rolling(3).max()
df['rolling_min'] = df[0].rolling(3).min()
df['result'] = df.apply(lambda row: 1 if row[0] == row['rolling_max'] else (-1 if row[0] == row['rolling_min'] else 0), axis=1)
Here is a solution with numpy using numpy.lib.stride_tricks.sliding_window_view, which was introduced in version 1.20.0.
Note that this solution (like the one proposed by #Hanwei Tang) does not exactly yield the result you was looking for, because in the second window ([2, 3, 2]) 2 is the minimum value and thus a -1 is returned instead of zero (what you requested). But maybe you should rethink whether you really want a zero for the second window or a -1.
EDIT: If a windows only contains same numbers, i.e. the minimum and maximum are the same, this method returns a zero.
import numpy as np
def rolling_max(a, wsize):
windows = np.lib.stride_tricks.sliding_window_view(a, wsize)
return np.max(windows, axis=-1)
def rolling_min(a, wsize):
windows = np.lib.stride_tricks.sliding_window_view(a, wsize)
return np.min(windows, axis=-1)
def check_prize(a, wsize):
rmax = rolling_max(a, wsize)
rmin = rolling_min(a, wsize)
ismax = np.where(a[wsize-1:] == rmax, 1, 0)
ismin = np.where(a[wsize-1:] == rmin, -1, 0)
result = np.zeros_like(a)
result[wsize-1:] = ismax + ismin
return result
a = np.array([1, 2, 3, 2, 1, 6])
check_prize(a, wsize=3)
# Output:
# array([ 0, 0, 1, -1, -1, 1])
b = np.array([1, 2, 4, 3, 1, 6])
check_prize(b, wsize=3)
# Output:
# array([ 0, 0, 1, 0, -1, 1])
c = np.array([1, 2, 2, 2, 1, 6])
check_prize(c, wsize=3)
# Output:
# array([ 0, 0, 1, 0, -1, 1])
Another approach using sliding_window_view with pad:
from numpy.lib.stride_tricks import sliding_window_view as swv
k = 3
a = np.array([1, 2, 3, 2, 1, 6])
# create sliding window
v = swv(np.pad(a.astype(float), (k-1, 0), constant_values=np.nan), k)
# compare each element to min/max of sliding window
out = np.select([np.max(v, 1)==a, np.min(v, 1)==a], [1, -1], 0)
Output: array([ 0, 0, 1, -1, -1, 1])
I managed to put the arrays in for loop and, depending on the condition, select the values I need. From these selected values I try to choose the highest value from the matrix a and b. Unfortunately, somehow I miss some syntax.
my code
a=np.array([0, 0, 0, 1, 1, 1, 2, 4,2, 2])
b=np.array([0, 1, 2, 0, 1, 2, 0, 1, 2,5])
max_b=b[0]
for (j), (k) in zip(a,b):
#print(j,k)
if j>=2 and k>=1:
print(j,'a')
print(k,'b')
output:
4 a
1 b
2 a
2 b
2 a
5 b
i need : From these numbers I need to choose the largest number from j and k
4 a
5 b
I also created the code specifically to get the highest value in the loop from one matrix without other conditions to make it work better, but I can't incorporate it correctly into my code
maxv=a[0]
for i in a:
if i > maxv:
maxv=i
print(maxv)
This is my attempt, but it is stupid
a=np.array([0, 0, 0, 1, 1, 1, 2, 4,2, 2])
b=np.array([0, 1, 2, 0, 1, 2, 0, 1, 2,5])
#max_b=b[0]
for (j), (k) in zip(a,b):
#print(j,k)
if j>=2 and k>=1:
#print(j,'a')
# print(k,'b')
max_a=j
max_b=k
if j > max_a:
max_a=k
print(max_a)
Can you advise me how it could work?
A correct solution using for loops follows.
You were not updating max_b, not keeping max_a at all, and not checking if the current max_b or max_a is smaller than the current value in order to update them.
import numpy as np
a = np.array([0, 0, 0, 1, 1, 1, 2, 4, 2, 2])
b = np.array([0, 1, 2, 0, 1, 2, 0, 1, 2, 5])
max_a = a[0]
max_b = b[0]
for j, k in zip(a, b):
# print(j,k)
if j >= 2 and k >= 1:
if max_a < j :
max_a = j
if max_b < k:
max_b = k
print(f"{max_a}, a)")
print(f"{max_b}, b)")
We can use numpy's masking, then .max().
This is a no-for-loops solution, also called vectorization.
import numpy as np
a = np.array([0, 0, 0, 1, 1, 1, 2, 4, 2, 2])
b = np.array([0, 1, 2, 0, 1, 2, 0, 1, 2, 5])
a_gt_2 = a >= 2
b_gt_1 = b >= 1
conditions_apply_mask = a_gt_2 & b_gt_1
a_filtered = a[conditions_apply_mask]
b_filtered = b[conditions_apply_mask]
max_a_filtered = a_filtered.max()
max_b_filtered = b_filtered.max()
print(f"{max_a_filtered}, a")
print(f"{max_b_filtered}, b")
I have an array indexs. It's very long (>10k), and each int value is rather small (<100). e.g.
indexs = np.array([1, 4, 3, 0, 0, 1, 2, 0]) # int index array
indexs_max = 4 # already known
Now I want to count occurrence of each index value (e.g. 0 for 3 times, 1 for 2 times...), and get counts as np.array([3, 2, 1, 1, 1]). I have tested 4 methods as follows:
UPDATE: _test4 is #Ch3steR's sol:
indexs = np.random.randint(0, 10, (20000,))
indexs_max = 9
def _test1():
counts = np.zeros((indexs_max + 1, ), dtype=np.int32)
for ind in indexs:
counts[ind] += 1
return counts
def _test2():
counts = np.zeros((indexs_max + 1,), dtype=np.int32)
uniq_vals, uniq_cnts = np.unique(indexs, return_counts=True)
counts[uniq_vals] = uniq_cnts
# this is because some value in range may be missing
return counts
def _test3():
therange = np.arange(0, indexs_max + 1)
counts = np.sum(indexs[None] == therange[:, None], axis=1)
return counts
def _test4():
return np.bincount(indexs, minlength=indexs_max+1)
Run for 500 times, their time usage are respectively 32.499472856521606s, 0.31386804580688477s, 0.14069509506225586s, 0.017721891403198242s. Although _test3 is the fastest, it uses additional big memory.
So I'm asking for any better methods. Thank u :) (#Ch3steR)
UPDATE: np.bincount seems optimal so far.
You can use np.bincount to count the occurrences in an array.
indexs = np.array([1, 4, 3, 0, 0, 1, 2, 0])
np.bincount(indexs)
# array([3, 2, 1, 1, 1])
# 0's 1's 2's 3's 4's count
There's a caveat to it np.bincount(x).size == np.amax(x)+1
Example:
indexs = np.array([5, 10])
np.bincount(indexs)
# array([0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1])
# 5's 10's count
Here's it would count occurrences of 0 to the max in the array, a workaround can be
c = np.bincount(indexs) # indexs is [5, 10]
c = c[c>0]
# array([1, 1])
# 5's 10's count
If you have no missing values from i.e from 0 to your_max you can use np.bincount.
Another caveat:
From docs:
Count the number of occurrences of each value in an array of non-negative ints.
With
input = [0,0,5,9,0,4,10,3,0]
as list
I need an output, which is going to be two highest values in input while setting other list elements to zero.
output = [0,0,0,9,0,0,10,0,0]
The closest I got:
from itertools import compress
import numpy as np
import operator
input= [0,0,5,9,0,4,10,3,0]
top_2_idx = np.argsort(test)[-2:]
test[top_2_idx[0]]
test[top_2_idx[1]]
Can you please help?
You can sort, find the two largest values, and then use a list comprehension:
input = [0,0,5,9,0,4,10,3,0]
*_, c1, c2 = sorted(input)
result = [0 if i not in {c1, c2} else i for i in input]
Output:
[0, 0, 0, 9, 0, 0, 10, 0, 0]
Not as pretty as Ajax's solution but a O(n) solution and a little more dynamic:
from collections import deque
def zero_non_max(lst, keep_top_n):
"""
Returns a list with all numbers zeroed out
except the keep_top_n.
>>> zero_non_max([0, 0, 5, 9, 0, 4, 10, 3, 0], 3)
>>> [0, 0, 5, 9, 0, 0, 10, 0, 0]
"""
lst = lst.copy()
top_n = deque(maxlen=keep_top_n)
for index, x in enumerate(lst):
if len(top_n) < top_n.maxlen or x > top_n[-1][0]:
top_n.append((x, index))
lst[index] = 0
for val, index in top_n:
lst[index] = val
return lst
lst = [0, 0, 5, 9, 0, 4, 10, 3, 0]
print(zero_non_max(lst, 2))
Output:
[0, 0, 0, 9, 0, 0, 10, 0, 0]
Pure numpy approach:
import numpy as np
arr = np.array([0, 0, 5, 9, 0, 4, 10, 3, 0])
top_2_idx = np.argsort(arr)[-2:]
np.put(arr, np.argwhere(~np.isin(arr, arr[top_2_idx])), 0)
print(arr)
The output:
[ 0 0 0 9 0 0 10 0 0]
Numpy.put
It's possible to achieve this with a single list traversal, making the algorithm O(n):
First find the two highest values with a single traversal;
Then create a list of zeros and add in the found maxima.
Code
def two_max(lst):
# Find two highest values in a single traversal
max_i, max_j = 0, 1
for i in range(len(lst)):
_, max_i, max_j = sorted((max_i, max_j, i), key=lst.__getitem__)
# Make a new list with zeros and replace both maxima
new_lst = [0] * len(lst)
new_lst[max_i], new_lst[max_j] = lst[max_i], lst[max_j]
return new_lst
lst = [0, 0, 5, 9, 0, 4, 10, 3, 0]
print(two_max(lst)) # [0, 0, 0, 9, 0, 0, 10, 0, 0]
Note that if the maximum value in the list appears more than twice, only the two left-most values will appear.
As a sidenote, do not use names such as input in your code as this overshadows the built-in function of the same name.
Here is another numpy-based solution that avoids sorting the entire array, which takes O(nlogn) time.
import numpy as np
arr = np.array([0,0,5,9,0,4,10,3,0])
arr[np.argpartition(arr,-2)[:-2]] = 0
If you want to create a new array as output:
result = np.zeros_like(arr)
idx = np.argpartition(arr,-2)[-2:]
result[idx] = arr[idx]
A corresponding Python-native solution is to use heap.nlargest, which also avoids sorting the entire array.
import heapq
arr = [0,0,5,9,0,4,10,3,0]
l = len(arr)
idx1, idx2 = heapq.nlargest(2, range(l), key=arr.__getitem__)
result = [0] * l
result[idx1] = arr[idx1]
result[idx2] = arr[idx2]
Consider a sequence of coin tosses: 1, 0, 0, 1, 0, 1 where tail = 0 and head = 1.
The desired output is the sequence: 0, 1, 2, 0, 1, 0
Each element of the output sequence counts the number of tails since the last head.
I have tried a naive method:
def timer(seq):
if seq[0] == 1: time = [0]
if seq[0] == 0: time = [1]
for x in seq[1:]:
if x == 0: time.append(time[-1] + 1)
if x == 1: time.append(0)
return time
Question: Is there a better method?
Using NumPy:
import numpy as np
seq = np.array([1,0,0,1,0,1,0,0,0,0,1,0])
arr = np.arange(len(seq))
result = arr - np.maximum.accumulate(arr * seq)
print(result)
yields
[0 1 2 0 1 0 1 2 3 4 0 1]
Why arr - np.maximum.accumulate(arr * seq)? The desired output seemed related to a simple progression of integers:
arr = np.arange(len(seq))
So the natural question is, if seq = np.array([1, 0, 0, 1, 0, 1]) and the expected result is expected = np.array([0, 1, 2, 0, 1, 0]), then what value of x makes
arr + x = expected
Since
In [220]: expected - arr
Out[220]: array([ 0, 0, 0, -3, -3, -5])
it looks like x should be the cumulative max of arr * seq:
In [234]: arr * seq
Out[234]: array([0, 0, 0, 3, 0, 5])
In [235]: np.maximum.accumulate(arr * seq)
Out[235]: array([0, 0, 0, 3, 3, 5])
Step 1: Invert l:
In [311]: l = [1, 0, 0, 1, 0, 1]
In [312]: out = [int(not i) for i in l]; out
Out[312]: [0, 1, 1, 0, 1, 0]
Step 2: List comp; add previous value to current value if current value is 1.
In [319]: [out[0]] + [x + y if y else y for x, y in zip(out[:-1], out[1:])]
Out[319]: [0, 1, 2, 0, 1, 0]
This gets rid of windy ifs by zipping adjacent elements.
Using itertools.accumulate:
>>> a = [1, 0, 0, 1, 0, 1]
>>> b = [1 - x for x in a]
>>> list(accumulate(b, lambda total,e: total+1 if e==1 else 0))
[0, 1, 2, 0, 1, 0]
accumulate is only defined in Python 3. There's the equivalent Python code in the above documentation, though, if you want to use it in Python 2.
It's required to invert a because the first element returned by accumulate is the first list element, independently from the accumulator function:
>>> list(accumulate(a, lambda total,e: 0))
[1, 0, 0, 0, 0, 0]
The required output is an array with the same length as the input and none of the values are equal to the input. Therefore, the algorithm must be at least O(n) to form the new output array. Furthermore for this specific problem, you would also need to scan all the values for the input array. All these operations are O(n) and it will not get any more efficient. Constants may differ but your method is already in O(n) and will not go any lower.
Using reduce:
time = reduce(lambda l, r: l + [(l[-1]+1)*(not r)], seq, [0])[1:]
I try to be clear in the following code and differ from the original in using an explicit accumulator.
>>> s = [1,0,0,1,0,1,0,0,0,0,1,0]
>>> def zero_run_length_or_zero(seq):
"Return the run length of zeroes so far in the sequnece or zero"
accumulator, answer = 0, []
for item in seq:
accumulator = 0 if item == 1 else accumulator + 1
answer.append(accumulator)
return answer
>>> zero_run_length_or_zero(s)
[0, 1, 2, 0, 1, 0, 1, 2, 3, 4, 0, 1]
>>>