I have a python Script when i run my script by using my account it's run without problem ,
But when i use the root account i have an issue like this
I don't know why i have a problem with import module
use an absolute python path to point to the version of python that has the right packages installed.
The command which python executed as the user where the script works should help.
If you used pip to install any package locally, then you might have to
ensure as well, that the environment variable $HOME points to /home/robot.
In general I'd recommend to create a virtualenv foe your specific python project and use it in the sudo call explicitely or if you refer change the #! line in your script to point to the right virtualenv,
Related
How should git bash be set up to run an non pip installed python library?
I am trying to run a Python library that I have git cloned (not pip installed) on Windows using git bash. I keep getting an error that the module cannot be found even though I have set the $PYTHONPATH to point to this folder.
This occurs both when using a venv and the base environment.
I've activated the venv using the activate command in the venv folder, and then added the folder to the PYTHONPATH as is shown here (excuse the blanking):
The first line shows the error I get when running the script which calls in other modules. The second shows my PYTHONPATH, the third my PATH
Adding the local folder to the path is how this functionality works on mac.
This the particular file that is meant to run, datagen.py:
#!/usr/bin/env python
from msq_data_gen.cli import cli
if __name__ == '__main__':
cli.datagen()
The code fails on the first import of msq_data_gen.
The structure of the program is as so:
Curiously, the integrated running of Pycharm works correctly, but as the code is based off a CLI, this isn't the intended usecase. (I could also use the unit testing mode for click, but I think an answer for this could be useful for other people!)
I'm trying to debug some python code using VS code. I'm getting the following error about a module that I am sure is installed.
Exception has occurred: ModuleNotFoundError
No module named 'SimpleITK'
File "C:\Users\Mido\Desktop\ProstateX-project\src\01-preprocessing\03_resample_nifti.py", line 8, in <module>
import SimpleITK as sitk
I installed the module using
sudo pip install SimpleITK
I know that it was installed because I was getting a similar error when I ran the code through the command line, and it was fixed by doing the above. I don't understand why VS code does not recognize that
After installing a new module via pip reloading vscode may work if vscode doesn't recognize it. To do this, make sure that the module is installed inside the virtual environment by creating and activating a virtualenv:
python3 -m venv env
source env/bin/activate
Make sure to use the correct way of installing a module with pip:
python3 -m pip install {new_module}
Replace the string "{new_module}" with your module name. After that, make sure to reload vscode by clicking Ctrl+Shift+P, and selecting Reload window.
Now vscode will know the new module and autocompletion works.
sudo pip install is most likely installing globally into a Python interpreter that is different than the one that you have selected in VS Code. Please select the Python interpreter you want to use and then install explicitly using that interpreter (if you're not using a virtual environment then use something like /path/to/python -m pip install SimpleITK, although I strongly recommend using a virtual environment and to not install packages globally).
In Mac, correctly selecting the Python Interpreter worked for me:
From within VS Code, select a Python 3 interpreter by opening the Command Palette (⇧⌘P), start typing the Python: Select Interpreter command to search, then select the command. You can also use the Select Python Environment option on the Status Bar if available (it may already show a selected interpreter, too):
No interpreter selected
The command presents a list of available interpreters that VS Code can find automatically, including virtual environments. If you don't see the desired interpreter, see Configuring Python environments.
Source :VS Code Select Interpreter
This error: your vscode use other python version. This solution change vscode use current python.
In terminal find current python version:
py --version
In vscode Press Ctrl+Shift+P then type:
Python: Select Interpreter
Select current python version
I ran into this problem with VSCode and resolved it by setting my Python interpreter within VSCode to the same as the one in my system path (type "echo %PATH%" on Windows and look for Python) via the process here: https://code.visualstudio.com/docs/python/python-tutorial#_select-a-python-interpreter
There are a lot of proposed answers that suggest changing the launch.json or the settings.json file. However, neither of these solutions worked for me.
My situation:
Is Python environment selected? yes
Does the Terminal recognize Python environment? yes
Can I run the Python code from the activated Terminal? yes
Does the code run w/o error when I use "Start Debugging"? yes
Does the code run when I click "Run Code"? no
The only solution that worked for me is to:
Open Windows Terminal (or cmd)
Activate environment: conda activate <environment_name>
Open Visual Studio Code from Terminal: code
Then, "Run Code" (#5) works without any issues.
Source:
"module not found error" in VS Code using Conda - l3d00m's answer
Faced similar issue and here is how I fixed it. Remember that there are multiple ways to run your code in VS code. And for each way you may end up with different interpreters and environments. For example:
1. Creating virtual env and installing libraries
In my case I opted into creating virtual environment and doing so outside of VS Code using command prompt:
python -m venv .plotting_test
Following that I activated it:
.plotting_test\Scripts\activate.bat
Following that I installed additional libraries:
python -m pip install matplotlib
Following that I made sure to see it was all installed ok:
python -m pip list
And I also checked where for current directory:
cd
2. Point VS Code & VS Code Code Runner to virtual environment
Opened vs code, closed previous workspaces, opened new folder, created test.py as I was starting new. Pressed ctrl + shift + p. Selected ```Python: Select Interpreter``:
Followed by + Enter interpreted path
Navigated to directory from last step from section 1. Found my virtual environment folder created in step one and pointed VS code to that version's python.exe in Scripts:
Verified I am pointed to such:
Saved as workspace so that I can create default workspace settings for this project:
In workspace settings files defined paths to my virtual environment created n step 1 for workspace interpreter & CODE RUNNER(!):
"settings": {
"python.defaultInterpreterPath": "C:/Users/yyguy/.plotting_test/Scripts/python.exe",
"code-runner.executorMap": {"python": "call C:/Users/yyguy/.plotting_test/Scripts/activate.bat && python -u"}
}
}
Reloaded window just to make sure (ctrl + shift + p) = "Developer: Reload Window"
Now run code and run python file should be execute under your specified envs:
Try running pip list in VS Code to check if the module is installed, next check if your python version is correct/supports that version of SimpleITK. It may be a problem with the python interpreter that you are using for VS Code (ie. the module may be installed on a different python instance than the one your VS Code is using)
Is Python environment selected?
Does the Terminal recognize the Python environment?
Can I run the Python code from the activated Terminal?
Does the code run w/o error when I use "Start Debugging"?
if the answer to the above is "yes."
Then,
Try running the Code using the option "Run python file in terminal" (in code runner extension). And assign a new shortcut for that for future use...
How to fix module not found error in Visual Studio code?
To Solve VSCode ModuleNotFoundError: No module named X Error Make sure you are running from the package folder (not from package/module ) if you want import module. calculations to work. You can also set the PYTHONPATH environment variable to the path to the package folder.
Once you have created a virtual environment, and installed your required packages in that environment, close VS code. For Windows platform, open command prompt and navigate to the folder where your virtual env folder is created. And then launch VS code from there using the command code .
For ex: My virtual env name is .imgenv, and its inside C:\py_stuff\projects
So, I navigate to C:\py_stuff\projects and then type code .
Now, your VS code should recognize the packages !
I just ran into the same issue. I found that if I selected all text before shift enter the script would compile as a file instead of as a single line.
I had the same problem. I bet you have a shebang statement at the top of your file.
If you do.
Visual Studios settings
Under "Code-runner->Code-runner: Respect Shebang" section or just do a search for "Code-runner: Respect Shebang"
Uncheck weather to respect Shebang to run code.
Now it will run under the virtual environment and find the modules that you installed using pip! :)
I struggled with this for a very long time, and had tried almost every other answer. I wasn't using pip, so that wasn't the issue. But still VS Code wasn't finding the modules that were installed in the Selected Interpreter.
Ultimately it came down to old conflicts that existed because I switched to miniconda, and VS Code was still looking for anaconda3.
I completely wiped VS Code and its associated files (cache, preference files, etc.) from my machine (some instructions), and installed a clean version.
This now syncs as expected with miniconda.
If you have different python versions installed, be sure you install module with right one.
python -m pip install <module>
or
python3 -m pip install <module>
Run your environment from a directory not in the users directory. I solved my problem running my environment from C:\Code\ProjectA\
I discovered my problem by running:
IMPORT os
Mycwd = os.getcwd()
PRINT(Mycwd)
.venv/Lib/SitePackages is the default directory where Vscode looks for Modules.
This directory is automatically created on creating .venv via the command Pallete.
External modules installed via pip are placed in this directory by default.
Place self created modules inside this folder manually.
For mac users
In the terminal check which python you are using by command which python. It will give you the path of the python interpreter path. After that type cmd shift P and type Python: Select interpreter.
After that select + Enter interpreter path and paste the path which you got after running the command which python.
I am using Python 3.5.2 version on Windows 7 and tried using python3 app.py. I am getting this error message:
'python3' is not recognized as an internal or external command,
operable program or batch file.
Is there any specific cause about why the python3 command is not working?
I also verified that the PATH is added to environment variables.
There is no python3.exe file, that is why it fails.
Try:
py
instead.
py is just a launcher for python.exe. If you have more than one python versions installed on your machine (2.x, 3.x) you can specify what version of python to launch by
py -2 or
py -3
You can also try this:
Go to the path where Python is installed in your system. For me it was something like C:\Users\\Local Settings\Application Data\Programs\Python\Python37
In this folder, you'll find a python executable. Just create a duplicate and rename it to python3. Works every time.
Python3.exe is not defined in windows
Specify the path for required version of python when you need to used it by creating virtual environment for your project
Python 3
virtualenv --python=C:\PATH_TO_PYTHON\python.exe environment
Python2
virtualenv --python=C:\PATH_TO_PYTHON\python.exe environment
then activate the environment using
.\environment\Scripts\activate.ps1
Yes, I think for Windows users you need to change all the python3 calls to python to solve your original error. This change will run the Python version set in your current environment. If you need to keep this call as it is (aka python3) because you are working in cross-platform or for any other reason, then a work around is to create a soft link. To create it, go to the folder that contains the Python executable and create the link. For example, this worked in my case in Windows 10 using mklink:
cd C:\Python3
mklink python3.exe python.exe
Use a (soft) symbolic link in Linux:
cd /usr/bin/python3
ln -s python.exe python3.exe
In my case I have a git hook on commit, specified by admin. So it was not very convenient for me to change the script (with python3 calls).
And the simplest workaround was just to copy python.exe to python3.exe.
Now I could launch both python and python3.
If python2 is not installed on your computer, you can try with just python instead of python3
For Python 27
virtualenv -p C:\Python27\python.exe django_concurrent_env
For Pyton36
virtualenv -p C:\Python36\python.exe django_concurrent_env
Enter the command to start up the server in that directory:
py -3.7 -m http.server
I had a related issue after installing windows 11, where python3 in cmd would open the windows store. I was able to sort it out between this post and this other one. In short, I reinstalled python and made sure to add it to PATH. Then, in settings, Apps > Apps & Features > App Execution aliases. Here, all I had to do was make sure that every single python .exe (including idle and pip) were turned off EXCEPT FOR the python3.exe alias. Now it works like a charm.
FWIW:
The root of this issue is not with you or with python. Apparently, Microsoft wanted to make installing python easier for young kiddos getting interested in coding, so they automatically add an executable to PATH. For those of us that already have this executable, it can cause these issues.
Found out instead press the play button the top right and it should work in visual studios:
Do not disable according to first answer
Saying python3 in the command will not work by default.
After figuring out the problem with the modules (Solution): https://youtu.be/paRXeLurjE4
Summary:
To import python modules in case of problem to import modules:
Hover over python in search:
Click open in folder
Hover over and right click
click properties
copy everything in path before \python.exe
close those windows
For cmd (administrator):
cd --path that was copied--
then python -m pip install --upgrade pip
cd Scripts
pip install "Name of Package" such as pip install --module (package) --
Im on win10 and have 3.7, 3.8 and 3.10 installed.
For me "python" launches version 3.10 and does not accept commands (like -3.7), "py" launches newest version but does accept commands, and "python3" does nothing.
Uninstalled 3.10 and "python" now does nothing, and "py" launches 3.8.
I am unable to add a comment, but the mlink option presented in this answer above https://stackoverflow.com/a/55229666/8441472 by #Stanislav preserves cross-platform shebangs at the top of scripts (#!/usr/bin/env python3) and launches the right python.
(Even if you install python from python.org, Windows will direct you to the app marketplace nowadays if you type python3 on the command line. If you type python on the same cli it will launch the python.org version repl. It leads to scripts that generate no output, but more likely silently failed completely. I don't know ho common this is but have experienced it on a couple of different devices)
If you have this at the top of your script to ensure you launch python3 and don't feel like editing everything you own, it is not a bad approach at all... lol.
I have a script that functions from within ipython but when I try and run the same script from the command line I receive import errors for a local module that I am trying to import:
from helper_functions.email_from_server import send_email
Error:
ImportError: No module named helper_functions.email_from_server
This script imports from within Ipython without any issues.
Comparatively, I have code that runs without any issues within ipython I can run another script using the command:
run script.py
From the command line I can run the same script:
python /dir/script.py
However this python /dir/script.py doesn't work with the script with local imports (from above) and I can't figure out if its a pythonpath issue or some local env issue? I have been reading through stack to find it but haven't been able to thus far. It feels like its just around the corner
One attempted solution:
PYTHONPATH=/dir/ python /dir/script.py
EDIT (to help clarify):
I am using an anaconda distribution on a linux machine.
Mucking about with PYTHONPATH is a recipe for sadness. You can do it, but you shouldn't. The correct thing to do is install your package in your correct environment. If you don't know how to create a package here's a super simple example. There may be some differences in your path when running via ipython vs command line.
You can find out what the differences are by using sys.executable and sys.path:
import sys
print(sys.executable)
print(sys.path)
Run that from IPython, and then run that from the python on your command line. You will undoubtedly get two different results. Since you're running Anaconda, you want to follow their guide for installing non-conda packages to install the one that you build.
Though of course that assumes that you've got the anaconda python on your path - you can check that out with which python since you're on Linux.
I resolved it via creating a wrapper shell script. Ugly in that i'm exporting the python path each time, but it works.
#!/bin/bash
export PYTHONPATH="${PYTHONPATH}:/my/dir"
source ~/.bash_profile
cd /my/dir && my/anaconda/location/bin/python /my/dir/to/script/cript.py
For activation there is a script that activates a virtualenv from an already running python interpeter using execfile('C:/path/to/virtualev/Scripts/activate_this.py', dict(__file__='C:/path/to/virtualev/Scripts/activate_this.py')). However since I can still import packages that are not in the virtualenv from the current python script I am confused about how it works.
For deactivation there is no python script at all.
What should I do?
From part of the VirtualEnv homepage.
You must use the custom Python interpreter to install libraries. But
to use libraries, you just have to be sure the path is correct. A
script is available to correct the path. You can setup the environment
like:
activate_this = '/path/to/env/bin/activate_this.py'
execfile(activate_this, dict(__file__=activate_this))
If you want to run a program outside of the virtualenv, just run your system python executable (e.g. /usr/bin/python) instead of the one in the virtualenv.
This souds like bad idea. You are trying to modify environment of your script within this script. Please explain why?
Can't you do it hierarchical? Use one script to run different scripts in different virtualenvs.
at the command line, type the word 'deactivate'