I have two data frames like following, data frame A has datetime even with minutes, data frame B only has hour.
df:A
dataDate original
2018-09-30 11:20:00 3
2018-10-01 12:40:00 10
2018-10-02 07:00:00 5
2018-10-27 12:50:00 5
2018-11-28 19:45:00 7
df:B
dataDate count
2018-09-30 10:00:00 300
2018-10-01 12:00:00 50
2018-10-02 07:00:00 120
2018-10-27 12:00:00 234
2018-11-28 19:05:00 714
I like to merge the two on the basis of hour date and hour, so that now in dataframe A should have all the rows filled on the basis of merge on date and hour
I can try to do it via
A['date'] = A.dataDate.date
B['date'] = B.dataDate.date
A['hour'] = A.dataDate.hour
B['hour'] = B.dataDate.hour
and then merge
merge_df = pd.merge(A,B, how='left', left_on=['date', 'hour'],
right_on=['date', 'hour'])
but its a very long process, Is their an efficient way to perform the same operation with the help of pandas time series or date functionality?
Use map if need append only one column from B to A with floor for set minutes and seconds if exist to 0:
d = dict(zip(B.dataDate.dt.floor('H'), B['count']))
A['count'] = A.dataDate.dt.floor('H').map(d)
print (A)
dataDate original count
0 2018-09-30 11:20:00 3 NaN
1 2018-10-01 12:40:00 10 50.0
2 2018-10-02 07:00:00 5 120.0
3 2018-10-27 12:50:00 5 234.0
4 2018-11-28 19:45:00 7 714.0
For general solution use DataFrame.join:
A.index = A.dataDate.dt.floor('H')
B.index = B.dataDate.dt.floor('H')
A = A.join(B, lsuffix='_left')
print (A)
dataDate_left original dataDate count
dataDate
2018-09-30 11:00:00 2018-09-30 11:20:00 3 NaT NaN
2018-10-01 12:00:00 2018-10-01 12:40:00 10 2018-10-01 12:00:00 50.0
2018-10-02 07:00:00 2018-10-02 07:00:00 5 2018-10-02 07:00:00 120.0
2018-10-27 12:00:00 2018-10-27 12:50:00 5 2018-10-27 12:00:00 234.0
2018-11-28 19:00:00 2018-11-28 19:45:00 7 2018-11-28 19:05:00 714.0
Related
I'm trying to measure the difference between timestamps using certain conditions. Using below, for each unique ID, I'm hoping to subtract the End Time where Item == A and the Start Time where Item == D.
So the timestamps are actually located on separate rows.
At the moment my process is returning an error. I'm also hoping to drop the .shift() for something more robust as each unique ID will have different combinations. For ex, A,B,C,D - A,B,D - A,D etc.
df = pd.DataFrame({'ID': [10,10,10,20,20,30],
'Start Time': ['2019-08-02 09:00:00','2019-08-03 10:50:00','2019-08-05 16:00:00','2019-08-04 08:00:00','2019-08-04 15:30:00','2019-08-06 11:00:00'],
'End Time': ['2019-08-04 15:00:00','2019-08-04 16:00:00','2019-08-05 16:00:00','2019-08-04 14:00:00','2019-08-05 20:30:00','2019-08-07 10:00:00'],
'Item': ['A','B','D','A','D','A'],
})
df['Start Time'] = pd.to_datetime(df['Start Time'])
df['End Time'] = pd.to_datetime(df['End Time'])
df['diff'] = (df.groupby('ID')
.apply(lambda x: x['End Time'].shift(1) - x['Start Time'].shift(1))
.reset_index(drop=True))
Intended Output:
ID Start Time End Time Item diff
0 10 2019-08-02 09:00:00 2019-08-04 15:00:00 A NaT
1 10 2019-08-03 10:50:00 2019-08-04 16:00:00 B NaT
2 10 2019-08-05 16:00:00 2019-08-05 16:00:00 D 1 days 01:00:00
3 20 2019-08-04 08:00:00 2019-08-04 14:00:00 A NaT
4 20 2019-08-04 15:30:00 2019-08-05 20:30:00 D 0 days 01:30:00
5 30 2019-08-06 11:00:00 2019-08-07 10:00:00 A NaT
df2 = df.set_index('ID')
df2.query('Item == "D"')['Start Time']-df2.query('Item == "A"')['End Time']
output:
ID
10 2 days 05:30:00
20 0 days 20:30:00
30 NaT
dtype: timedelta64[ns]
older answer
The issue is your fillna, you can't have strings in a timedelta column:
df['diff'] = (df.groupby('ID')
.apply(lambda x: x['End Time'].shift(1) - x['Start Time'].shift(1))
#.fillna('-') # the issue is here
.reset_index(drop=True))
output:
ID Start Time End Time Item diff
0 10 2019-08-02 09:00:00 2019-08-02 09:30:00 A NaT
1 10 2019-08-03 10:50:00 2019-08-03 11:00:00 B 0 days 00:30:00
2 10 2019-08-04 15:00:00 2019-08-05 16:00:00 C 0 days 00:10:00
3 20 2019-08-04 08:00:00 2019-08-04 14:00:00 B NaT
4 20 2019-08-05 10:30:00 2019-08-05 20:30:00 C 0 days 06:00:00
5 30 2019-08-06 11:00:00 2019-08-07 10:00:00 A NaT
IIUC use:
df1 = df.pivot('ID','Item')
print (df1)
Start Time \
Item A B D
ID
10 2019-08-02 09:00:00 2019-08-03 10:50:00 2019-08-04 15:00:00
20 2019-08-04 08:00:00 NaT 2019-08-05 10:30:00
30 2019-08-06 11:00:00 NaT NaT
End Time
Item A B D
ID
10 2019-08-02 09:30:00 2019-08-03 11:00:00 2019-08-05 16:00:00
20 2019-08-04 14:00:00 NaT 2019-08-05 20:30:00
30 2019-08-07 10:00:00 NaT NaT
a = df1[('Start Time','D')].sub(df1[('End Time','A')])
print (a)
ID
10 2 days 05:30:00
20 0 days 20:30:00
30 NaT
dtype: timedelta64[ns]
I have the following table:
Hora_Retiro count_uses
0 00:00:18 1
1 00:00:34 1
2 00:02:27 1
3 00:03:13 1
4 00:06:45 1
... ... ...
748700 23:58:47 1
748701 23:58:49 1
748702 23:59:11 1
748703 23:59:47 1
748704 23:59:56 1
And I want to group all values within each hour, so I can see the total number of uses per hour (00:00:00 - 23:00:00)
I have the following code:
hora_pico_aug= hora_pico.groupby(pd.Grouper(key="Hora_Retiro",freq='H')).count()
Hora_Retiro column is of timedelta64[ns] type
Which gives the following output:
count_uses
Hora_Retiro
00:00:02 2566
01:00:02 602
02:00:02 295
03:00:02 5
04:00:02 10
05:00:02 4002
06:00:02 16075
07:00:02 39410
08:00:02 76272
09:00:02 56721
10:00:02 36036
11:00:02 32011
12:00:02 33725
13:00:02 41032
14:00:02 50747
15:00:02 50338
16:00:02 42347
17:00:02 54674
18:00:02 76056
19:00:02 57958
20:00:02 34286
21:00:02 22509
22:00:02 13894
23:00:02 7134
However, the index column starts at 00:00:02, and I want it to start at 00:00:00, and then go from one hour intervals. Something like this:
count_uses
Hora_Retiro
00:00:00 2565
01:00:00 603
02:00:00 295
03:00:00 5
04:00:00 10
05:00:00 4002
06:00:00 16075
07:00:00 39410
08:00:00 76272
09:00:00 56721
10:00:00 36036
11:00:00 32011
12:00:00 33725
13:00:00 41032
14:00:00 50747
15:00:00 50338
16:00:00 42347
17:00:00 54674
18:00:00 76056
19:00:00 57958
20:00:00 34286
21:00:00 22509
22:00:00 13894
23:00:00 7134
How can i make it to start at 00:00:00??
Thanks for the help!
You can create an hour column from Hora_Retiro column.
df['hour'] = df['Hora_Retiro'].dt.hour
And then groupby on the basis of hour
gpby_df = df.groupby('hour')['count_uses'].sum().reset_index()
gpby_df['hour'] = pd.to_datetime(gpby_df['hour'], format='%H').dt.time
gpby_df.columns = ['Hora_Retiro', 'sum_count_uses']
gpby_df
gives
Hora_Retiro sum_count_uses
0 00:00:00 14
1 09:00:00 1
2 10:00:00 2
3 20:00:00 2
I assume that Hora_Retiro column in your DataFrame is of
Timedelta type. It is not datetime, as in this case there
would be printed also the date part.
Indeed, your code creates groups starting at the minute / second
taken from the first row.
To group by "full hours":
round each element in this column to hour,
then group (just by this rounded value).
The code to do it is:
hora_pico.groupby(hora_pico.Hora_Retiro.apply(
lambda tt: tt.round('H'))).count_uses.count()
However I advise you to make up your mind, what do you want to count:
rows or values in count_uses column.
In the second case replace count function with sum.
Here I have an extract from my pandas dataframe which is survey data with two datetime fields. It appears that some of the start times and end times were filled in the wrong position in the survey. Here is an example from my dataframe. The start and end time in the 8th row, I suspect were entered the wrong way round.
Just to give context, I generated the third column like this:
df_time['trip_duration'] = df_time['tripEnd_time'] - df_time['tripStart_time']
The three columns are in timedelta64 format.
Here is the top of my dataframe:
tripStart_time tripEnd_time trip_duration
1 22:30:00 23:15:00 00:45:00
2 11:00:00 11:30:00 00:30:00
3 09:00:00 09:15:00 00:15:00
4 13:30:00 14:25:00 00:55:00
5 09:00:00 10:15:00 01:15:00
6 12:00:00 12:15:00 00:15:00
7 08:00:00 08:30:00 00:30:00
8 11:00:00 09:15:00 -1 days +22:15:00
9 14:00:00 14:30:00 00:30:00
10 14:55:00 15:20:00 00:25:00
What I am trying to do is, loop through these two columns, and for each time 'tripEnd_time' is less than 'tripStart_time' swap the positions of these two entries. So in the case of row 8 above, I would make tripStart_time = tripEnd_time and tripEnd_time = tripStart_time.
I am not quite sure the best way to approach this. Should I use nested for loop where i compare each entry in the two columns?
Thanks
Use Series.abs:
df_time['trip_duration'] = (df_time['tripEnd_time'] - df_time['tripStart_time']).abs()
print (df_time)
1 22:30:00 23:15:00 00:45:00
2 11:00:00 11:30:00 00:30:00
3 09:00:00 09:15:00 00:15:00
4 13:30:00 14:25:00 00:55:00
5 09:00:00 10:15:00 01:15:00
6 12:00:00 12:15:00 00:15:00
7 08:00:00 08:30:00 00:30:00
8 11:00:00 09:15:00 01:45:00
9 14:00:00 14:30:00 00:30:00
10 14:55:00 15:20:00 00:25:00
What is same like:
a = df_time['tripEnd_time'] - df_time['tripStart_time']
b = df_time['tripStart_time'] - df_time['tripEnd_time']
mask = df_time['tripEnd_time'] > df_time['tripStart_time']
df_time['trip_duration'] = np.where(mask, a, b)
print (df_time)
tripStart_time tripEnd_time trip_duration
1 22:30:00 23:15:00 00:45:00
2 11:00:00 11:30:00 00:30:00
3 09:00:00 09:15:00 00:15:00
4 13:30:00 14:25:00 00:55:00
5 09:00:00 10:15:00 01:15:00
6 12:00:00 12:15:00 00:15:00
7 08:00:00 08:30:00 00:30:00
8 11:00:00 09:15:00 01:45:00
9 14:00:00 14:30:00 00:30:00
10 14:55:00 15:20:00 00:25:00
You can switch column values on selected rows:
df_time.loc[df_time['tripEnd_time'] < df_time['tripStart_time'],
['tripStart_time', 'tripEnd_time']] = df_time.loc[
df_time['tripEnd_time'] < df_time['tripStart_time'],
['tripEnd_time', 'tripStart_time']].values
I want to calculate time difference between two columns on specific time range.
I try df.between_time but it only works on index.
Ex. Time range: between 18.00 - 8.00
Data :
start stop
0 2018-07-16 16:00:00 2018-07-16 20:00:00
1 2018-07-11 08:03:00 2018-07-11 12:03:00
2 2018-07-13 17:54:00 2018-07-13 21:54:00
3 2018-07-14 13:09:00 2018-07-14 17:09:00
4 2018-07-20 00:21:00 2018-07-20 04:21:00
5 2018-07-20 17:00:00 2018-07-21 09:00:00
Expect Result :
start stop time_diff
0 2018-07-16 16:00:00 2018-07-16 20:00:00 02:00:00
1 2018-07-11 08:03:00 2018-07-11 12:03:00 0
2 2018-07-13 17:54:00 2018-07-13 21:54:00 03:54:00
3 2018-07-14 13:09:00 2018-07-14 17:09:00 0
4 2018-07-20 00:21:00 2018-07-20 04:21:00 04:00:00
5 2018-07-20 17:00:00 2018-07-21 09:00:00 14:00:00
Note: If time_diff > 1 days, I already deal with that case.
Question: Should I build a function to do this or there are pandas build-in function to do this? Any help or guide would be appreciated.
I think this can be a solution
tmp = pd.DataFrame({'time1': pd.to_datetime(['2018-07-16 16:00:00', '2018-07-11 08:03:00',
'2018-07-13 17:54:00', '2018-07-14 13:09:00',
'2018-07-20 00:21:00', '2018-07-20 17:00:00']),
'time2': pd.to_datetime(['2018-07-16 20:00:00', '2018-07-11 12:03:00',
'2018-07-13 21:54:00', '2018-07-14 17:09:00',
'2018-07-20 04:21:00', '2018-07-21 09:00:00'])})
time1_date = tmp.time1.dt.date.astype(str)
tmp['rule18'], tmp['rule08'] = pd.to_datetime(time1_date + ' 18:00:00'), pd.to_datetime(time1_date + ' 08:00:00')
# if stop exceeds 18:00:00, compute time difference from this hour
tmp['time_diff_rule1'] = np.where(tmp.time2 > tmp.rule18, (tmp.time2 - tmp.rule18), (tmp.time2 - tmp.time1))
# rearrange the dataframe with your second rule
tmp['time_diff_rule2'] = np.where((tmp.time2 < tmp.rule18) & (tmp.time1 > tmp.rule08), 0, tmp['time_diff_rule1'])
time_diff_rule1 time_diff_rule2
0 02:00:00 02:00:00
1 04:00:00 00:00:00
2 03:54:00 03:54:00
3 04:00:00 00:00:00
4 04:00:00 04:00:00
5 15:00:00 15:00:00
Fairly new to python and pandas here.
I make a query that's giving me back a timeseries. I'm never sure how many data points I receive from the query (run for a single day), but what I do know is that I need to resample them to contain 24 points (one for each hour in the day).
Printing m3hstream gives
[(1479218009000L, 109), (1479287368000L, 84)]
Then I try to make a dataframe df with
df = pd.DataFrame(data = list(m3hstream), columns=['Timestamp', 'Value'])
and this gives me an output of
Timestamp Value
0 1479218009000 109
1 1479287368000 84
Following I do this
daily_summary = pd.DataFrame()
daily_summary['value'] = df['Value'].resample('H').mean()
daily_summary = daily_summary.truncate(before=start, after=end)
print "Now daily summary"
print daily_summary
But this is giving me a TypeError: Only valid with DatetimeIndex, TimedeltaIndex or PeriodIndex, but got an instance of 'RangeIndex'
Could anyone please let me know how to resample it so I have 1 point for each hour in the 24 hour period that I'm querying for?
Thanks.
First thing you need to do is convert that 'Timestamp' to an actual pd.Timestamp. It looks like those are milliseconds
Then resample with the on parameter set to 'Timestamp'
df = df.assign(
Timestamp=pd.to_datetime(df.Timestamp, unit='ms')
).resample('H', on='Timestamp').mean().reset_index()
Timestamp Value
0 2016-11-15 13:00:00 109.0
1 2016-11-15 14:00:00 NaN
2 2016-11-15 15:00:00 NaN
3 2016-11-15 16:00:00 NaN
4 2016-11-15 17:00:00 NaN
5 2016-11-15 18:00:00 NaN
6 2016-11-15 19:00:00 NaN
7 2016-11-15 20:00:00 NaN
8 2016-11-15 21:00:00 NaN
9 2016-11-15 22:00:00 NaN
10 2016-11-15 23:00:00 NaN
11 2016-11-16 00:00:00 NaN
12 2016-11-16 01:00:00 NaN
13 2016-11-16 02:00:00 NaN
14 2016-11-16 03:00:00 NaN
15 2016-11-16 04:00:00 NaN
16 2016-11-16 05:00:00 NaN
17 2016-11-16 06:00:00 NaN
18 2016-11-16 07:00:00 NaN
19 2016-11-16 08:00:00 NaN
20 2016-11-16 09:00:00 84.0
If you want to fill those NaN values, use ffill, bfill, or interpolate
df.assign(
Timestamp=pd.to_datetime(df.Timestamp, unit='ms')
).resample('H', on='Timestamp').mean().reset_index().interpolate()
Timestamp Value
0 2016-11-15 13:00:00 109.00
1 2016-11-15 14:00:00 107.75
2 2016-11-15 15:00:00 106.50
3 2016-11-15 16:00:00 105.25
4 2016-11-15 17:00:00 104.00
5 2016-11-15 18:00:00 102.75
6 2016-11-15 19:00:00 101.50
7 2016-11-15 20:00:00 100.25
8 2016-11-15 21:00:00 99.00
9 2016-11-15 22:00:00 97.75
10 2016-11-15 23:00:00 96.50
11 2016-11-16 00:00:00 95.25
12 2016-11-16 01:00:00 94.00
13 2016-11-16 02:00:00 92.75
14 2016-11-16 03:00:00 91.50
15 2016-11-16 04:00:00 90.25
16 2016-11-16 05:00:00 89.00
17 2016-11-16 06:00:00 87.75
18 2016-11-16 07:00:00 86.50
19 2016-11-16 08:00:00 85.25
20 2016-11-16 09:00:00 84.00
Let's try:
daily_summary = daily_summary.set_index('Timestamp')
daily_summary.index = pd.to_datetime(daily_summary.index, unit='ms')
For once an hour:
daily_summary.resample('H').mean()
or for once a day:
daily_summary.resample('D').mean()