pgAdmin4 install - Target WSGI script cannot be loaded as Python module - python

This question has been asked before here but the solution does not work for me. My python venv configuration is not playing well with the apache2 mod_wsgi and I cannot root-cause the issue. At present, I cannot comment on this question so I'm posting another one
Here are the apache2 error logs when trying to log into the site.
[Fri Dec 07 20:32:25.476491 2018] [wsgi:warn] [pid 25982:tid 140573456193408] mod_wsgi: Compiled for Python/3.5.1+.
[Fri Dec 07 20:32:25.476529 2018] [wsgi:warn] [pid 25982:tid 140573456193408] mod_wsgi: Runtime using Python/3.5.2.
[Fri Dec 07 20:32:25.477326 2018] [mpm_event:notice] [pid 25982:tid 140573456193408] AH00489: Apache/2.4.18 (Ubuntu) mod_wsgi/4.3.0 Python/3.5.2 configured -- resuming normal operations
[Fri Dec 07 20:32:25.477362 2018] [core:notice] [pid 25982:tid 140573456193408] AH00094: Command line: '/usr/sbin/apache2'
[Fri Dec 07 20:34:24.401510 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] mod_wsgi (pid=25983): Target WSGI script '/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/pgAdmin4.wsgi' cannot be loaded as Python module.
[Fri Dec 07 20:34:24.401642 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] mod_wsgi (pid=25983): Exception occurred processing WSGI script '/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/pgAdmin4.wsgi'.
[Fri Dec 07 20:34:24.402195 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] Traceback (most recent call last):
[Fri Dec 07 20:34:24.402229 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] File "/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/pgAdmin4.wsgi", line 25, in <module>
[Fri Dec 07 20:34:24.402236 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] import config
[Fri Dec 07 20:34:24.402244 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] File "/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/config.py", line 29, in <module>
[Fri Dec 07 20:34:24.402248 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] from pgadmin.utils import env, IS_PY2, IS_WIN, fs_short_path
[Fri Dec 07 20:34:24.402256 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] File "/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/pgadmin/__init__.py", line 18, in <module>
[Fri Dec 07 20:34:24.402260 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] from flask import Flask, abort, request, current_app, session, url_for
[Fri Dec 07 20:34:24.402280 2018] [wsgi:error] [pid 25983:tid 140573343934208] [remote 10.2.5.243:15047] ImportError: No module named 'flask'
Here is the Vhost configuration:
<VirtualHost *>
ServerName shinyapp01t
WSGIDaemonProcess pgadmin processes=1 threads=25 python-home=/home/awashburn/anaconda3/envs/pgadmin4 display-name=pgadmin4
WSGIScriptAlias /pgadmin /home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/pgAdmin4.wsgi
<Directory "/home/awashburn/anaconda3/envs/pgadmin4/lib/python3.7/site-packages/pgadmin4/">
WSGIProcessGroup pgadmin
WSGIApplicationGroup %{GLOBAL}
Require all granted
</Directory>
</VirtualHost>
I referenced these instructions from DigitalOcean trying to install pgAdmin4 on Ubuntu 16.04.
Edit: I used a python3 venv instead of anaconda virtual env and everything worked fine. So the root cause is the anaconda system. There's a discussion on the mod_wsgi mailing list about this

Related

Target WSGI script cannot be loaded as a python module

I have been trying to get my django app deployed for a while now and no matter what I have followed and tried I keep running into errors.
I am currently getting this error:
Target WSGI script '/home/brickmane/djangoapp/myserver/backend/core/wsgi.py' cannot be loaded as Python module.
and
ModuleNotFoundError: No module named 'contextvars'
which is not something I used myself in my project.
I have tried some solutions like using:
sudo chmod a+x wsgi.py
and trying libapache2-mod-wsgi-py3 vs libapache2-mod-wsgi
my apache2.conf file where I placed my virtual host and the settings for my app:
WSGIPythonHome /home/brickmane/djangoapp/myserver/venv
WSGIPythonPath /home/brickmane/djangoapp/myserver/backend
<VirtualHost *:80>
ServerAlias www.d8pricecheck.tk
WSGIProcessGroup backend
Alias /static/ /home/brickmane/djangoapp/myserver/backend/static/
<Directory /home/brickmane/djangoapp/myserver/backend/static>
Require all granted
</Directory>
WSGIScriptAlias / /home/brickmane/djangoapp/myserver/backend/core/wsgi.py
<Directory /home/brickmane/djangoapp/myserver/backend/core>
<Files wsgi.py>
Require all granted
</Files>
</Directory>
WSGIDaemonProcess backend python-path=/home/brickmane/djangoapp/myserver/backend/core python-home=/home/brickmane/djangoapp/myserver/venv
WSGIProcessGroup backend
</VirtualHost>
my wsgi.py file:
import os, sys
# add the hellodjango project path into the sys.path
sys.path.append('/home/brickmane/djangoapp/myserver/backend/')
sys.path.append('/home/brickmane/djangoapp/myserver/backend/core/')
# add the virtualenv site-packages path to the sys.path
sys.path.append('/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages')
# poiting to the project settings
os.environ.setdefault("DJANGO_SETTINGS_MODULE", "core.settings")
from django.core.wsgi import get_wsgi_application
application = get_wsgi_application()
This is my full apache error log from restarting the service and trying to access my website:
[Mon Jan 31 12:28:54.228176 2022] [mpm_prefork:notice] [pid 19551] AH00173: SIGHUP received. Attempting to restart
[Mon Jan 31 12:28:54.292016 2022] [ssl:warn] [pid 19551] AH01916: Init: (brickmaneserver.comcast.net:443) You configured HTTP(80) on the standard HTTPS(443) port!
[Mon Jan 31 12:28:54.296542 2022] [mpm_prefork:notice] [pid 19551] AH00163: Apache/2.4.29 (Ubuntu) OpenSSL/1.1.1g mod_wsgi/4.5.17 Python/3.6 configured -- resuming normal operations
[Mon Jan 31 12:28:54.296588 2022] [core:notice] [pid 19551] AH00094: Command line: '/usr/sbin/apache2'
[Mon Jan 31 12:29:00.082063 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] mod_wsgi (pid=19618): Target WSGI script '/home/brickmane/djangoapp/myserver/backend/core/wsgi.py' cannot be loaded as Python module.
[Mon Jan 31 12:29:00.082120 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] mod_wsgi (pid=19618): Exception occurred processing WSGI script '/home/brickmane/djangoapp/myserver/backend/core/wsgi.py'.
[Mon Jan 31 12:29:00.082830 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] Traceback (most recent call last):
[Mon Jan 31 12:29:00.082874 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/backend/core/wsgi.py", line 12, in <module>
[Mon Jan 31 12:29:00.082880 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] from django.core.wsgi import get_wsgi_application
[Mon Jan 31 12:29:00.082890 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/core/wsgi.py", line 2, in <module>
[Mon Jan 31 12:29:00.082895 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] from django.core.handlers.wsgi import WSGIHandler
[Mon Jan 31 12:29:00.082920 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/core/handlers/wsgi.py", line 3, in <module>
[Mon Jan 31 12:29:00.082925 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] from django.conf import settings
[Mon Jan 31 12:29:00.082933 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/conf/__init__.py", line 19, in <module>
[Mon Jan 31 12:29:00.082938 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] from django.utils.deprecation import RemovedInDjango50Warning
[Mon Jan 31 12:29:00.082946 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/utils/deprecation.py", line 5, in <module>
[Mon Jan 31 12:29:00.082951 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] from asgiref.sync import sync_to_async
[Mon Jan 31 12:29:00.082959 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/asgiref/sync.py", line 2, in <module>
[Mon Jan 31 12:29:00.082963 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] import contextvars
[Mon Jan 31 12:29:00.082981 2022] [wsgi:error] [pid 19618] [remote 108.162.238.175:59436] ModuleNotFoundError: No module named 'contextvars'
[Mon Jan 31 12:29:00.343820 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] mod_wsgi (pid=19618): Target WSGI script '/home/brickmane/djangoapp/myserver/backend/core/wsgi.py' cannot be loaded as Python module.
[Mon Jan 31 12:29:00.343880 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] mod_wsgi (pid=19618): Exception occurred processing WSGI script '/home/brickmane/djangoapp/myserver/backend/core/wsgi.py'.
[Mon Jan 31 12:29:00.344018 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] Traceback (most recent call last):
[Mon Jan 31 12:29:00.344063 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/backend/core/wsgi.py", line 12, in <module>
[Mon Jan 31 12:29:00.344069 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] from django.core.wsgi import get_wsgi_application
[Mon Jan 31 12:29:00.344079 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/core/wsgi.py", line 2, in <module>
[Mon Jan 31 12:29:00.344084 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] from django.core.handlers.wsgi import WSGIHandler
[Mon Jan 31 12:29:00.344092 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/core/handlers/wsgi.py", line 3, in <module>
[Mon Jan 31 12:29:00.344097 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] from django.conf import settings
[Mon Jan 31 12:29:00.344105 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/conf/__init__.py", line 19, in <module>
[Mon Jan 31 12:29:00.344109 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] from django.utils.deprecation import RemovedInDjango50Warning
[Mon Jan 31 12:29:00.344117 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/django/utils/deprecation.py", line 5, in <module>
[Mon Jan 31 12:29:00.344122 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] from asgiref.sync import sync_to_async
[Mon Jan 31 12:29:00.344130 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] File "/home/brickmane/djangoapp/myserver/venv/lib/python3.10/site-packages/asgiref/sync.py", line 2, in <module>
[Mon Jan 31 12:29:00.344135 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] import contextvars
[Mon Jan 31 12:29:00.344164 2022] [wsgi:error] [pid 19618] [remote 162.158.187.159:38614] ModuleNotFoundError: No module named 'contextvars'
You have configured Apache with python3.6 but run python3.10 in your virt.env (contextvars is part of python since version 3.7)
You should always run Apache with the same python version as in the virt.env

Target WSGI script myapp.wsgi' cannot be loaded as Python module, ModuleNotFoundError: No module named 'flask'

I a trying to run a "hello world" python application from the server using Apache web server port 80. Here, I have setup python virtual environment compacting with python version 3.8. created virtual host, wsgi file and now trying to call the URL on browser, I am getting 500 internal server error. Apache error log file details provided here.
1. Ubuntu 18.04,
2. Python 3.8,
3. Apache 2.4
Virtual host configuration
#WSGIDaemonProcess MyApp python-home=/usr/local/env/myApp/venv threads=5i
WSGIDaemonProcess Myapp user=www-data group=www-data python-home=/usr/local/env/myApp/venv python-path=/usr/local/env/myApp threads=5
WSGIScriptAlias /project_wsgi /usr/local/env/myApp/myapp.wsgi
#WSGIProcessGroup myApp
WSGIApplicationGroup Myapp
#WSGIImportScript %{GLOBAL}
#WSGIPythonHome /usr/local/env/myApp/venv
<VirtualHost *:80>
<Directory /usr/local/env/myApp>
Require all granted
Order allow,deny
Allow from all
LogLevel info
</Directory>
</VirtualHost>
WSGI file
import os
import sys
sys.path.insert(0, '/usr/local/env/myApp/')
python_home = '/usr/local/env/myApp/venv'
#activate_this = '/usr/local/env/myApp/venv/bin/activate_this.py'
#with open(activate_this) as file_:
# exec(file_.read(), dict(__file__=activate_this))
from app.myApp import app as application
apache error logs
[Fri Jan 31 16:00:28.990978 2020] [wsgi:info] [pid 58589:tid 140712013437888] mod_wsgi (pid=58589): Starting process 'Myapp' with uid=33, gid=33 and threads=5.
[Fri Jan 31 16:00:28.991819 2020] [wsgi:info] [pid 58589:tid 140712013437888] mod_wsgi (pid=58589): Python home /usr/local/env/myApp/venv.
[Fri Jan 31 16:00:28.991863 2020] [wsgi:info] [pid 58589:tid 140712013437888] mod_wsgi (pid=58589): Initializing Python.
[Fri Jan 31 16:00:28.991926 2020] [mpm_event:notice] [pid 102854:tid 140712013437888] AH00489: Apache/2.4.29 (Ubuntu) mod_wsgi/4.5.17 Python/3.6 configured -- resuming normal operations
[Fri Jan 31 16:00:28.991937 2020] [mpm_event:info] [pid 102854:tid 140712013437888] AH00490: Server built: 2019-09-16T12:58:48
[Fri Jan 31 16:00:28.991952 2020] [core:notice] [pid 102854:tid 140712013437888] AH00094: Command line: '/usr/sbin/apache2'
[Fri Jan 31 16:00:28.993170 2020] [wsgi:info] [pid 58591:tid 140712013437888] mod_wsgi (pid=58591): Initializing Python.
[Fri Jan 31 16:00:28.993874 2020] [wsgi:info] [pid 58590:tid 140712013437888] mod_wsgi (pid=58590): Initializing Python.
[Fri Jan 31 16:00:29.061111 2020] [wsgi:info] [pid 58589:tid 140712013437888] mod_wsgi (pid=58589): Attach interpreter ''.
[Fri Jan 31 16:00:29.088271 2020] [wsgi:info] [pid 58589:tid 140712013437888] mod_wsgi (pid=58589): Adding '/usr/local/env/myApp' to path.
[Fri Jan 31 16:00:29.089075 2020] [wsgi:info] [pid 58591:tid 140712013437888] mod_wsgi (pid=58591): Attach interpreter ''.
[Fri Jan 31 16:00:29.089966 2020] [wsgi:info] [pid 58590:tid 140712013437888] mod_wsgi (pid=58590): Attach interpreter ''.
[Fri Jan 31 16:02:22.375687 2020] [wsgi:info] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] mod_wsgi (pid=58591, process='', application='Myapp'): Loading WSGI script '/usr/local/env/myApp/myapp.wsgi'.
[Fri Jan 31 16:02:22.381101 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] mod_wsgi (pid=58591): Target WSGI script '/usr/local/env/myApp/myapp.wsgi' cannot be loaded as Python module.
[Fri Jan 31 16:02:22.381132 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] mod_wsgi (pid=58591): Exception occurred processing WSGI script '/usr/local/env/myApp/myapp.wsgi'.
[Fri Jan 31 16:02:22.381374 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] Traceback (most recent call last):
[Fri Jan 31 16:02:22.381400 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] File "/usr/local/env/myApp/myapp.wsgi", line 10, in <module>
[Fri Jan 31 16:02:22.381405 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] from app.myApp import app as application
[Fri Jan 31 16:02:22.381411 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] File "/usr/local/env/myApp/app/myApp.py", line 1, in <module>
[Fri Jan 31 16:02:22.381414 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] from flask import Flask
[Fri Jan 31 16:02:22.381436 2020] [wsgi:error] [pid 58591:tid 140711785658112] [client 146.176.178.57:50395] ModuleNotFoundError: No module named 'flask'
I have installed flask on the virtual environment and trying to activate from the WSGI file execution. However, this is not working for me.
FYI : The commented lines on virtual host is already I have tried.

Django WSGI APACHE ModuleNotFoundError: No module named 'django'

its been a nightmare trying to deploy django using apache and wsgi on ubuntu server 18, I created a virtual environment, installed dependencies, restarted apache many times however apache wsgi cant find django in my virtual environment.
I can run manage.py runserver so virtual environment dependencies are ok.
My python version for venv is 3.8
this is apache error log:
[Sun Dec 08 02:09:53.028651 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59496] from django.core.wsgi import get_wsgi_application
[Sun Dec 08 02:09:53.028666 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59496] ModuleNotFoundError: No module named 'django'
[Sun Dec 08 02:09:53.335770 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] mod_wsgi (pid=18902): Target WSGI script '/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py' cannot be loaded as Python module.
[Sun Dec 08 02:09:53.335820 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] mod_wsgi (pid=18902): Exception occurred processing WSGI script '/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py'.
[Sun Dec 08 02:09:53.335893 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] Traceback (most recent call last):
[Sun Dec 08 02:09:53.335915 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] File "/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py", line 17, in <module>
[Sun Dec 08 02:09:53.335919 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] from django.core.wsgi import get_wsgi_application
[Sun Dec 08 02:09:53.335933 2019] [wsgi:error] [pid 18902:tid 140235648796416] [remote 186.116.79.225:59497] ModuleNotFoundError: No module named 'django'
[Sun Dec 08 02:09:53.665977 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] mod_wsgi (pid=18902): Target WSGI script '/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py' cannot be loaded as Python module.
[Sun Dec 08 02:09:53.666021 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] mod_wsgi (pid=18902): Exception occurred processing WSGI script '/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py'.
[Sun Dec 08 02:09:53.666097 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] Traceback (most recent call last):
[Sun Dec 08 02:09:53.666120 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] File "/var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py", line 17, in <module>
[Sun Dec 08 02:09:53.666124 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] from django.core.wsgi import get_wsgi_application
[Sun Dec 08 02:09:53.666139 2019] [wsgi:error] [pid 18902:tid 140235766351616] [remote 186.116.79.225:59498] ModuleNotFoundError: No module named 'django'
I don't know what to do,
this is my /etc/apache2/sites-available/000-default.conf file:
<VirtualHost *:80>
Alias /static /var/www/iotconfigserver/IOT_config_rest/static
<Directory /var/www/iotconfigserver/IOT_config_rest/static>
Require all granted
</Directory>
<Directory /var/www/iotconfigserver/IOT_config_rest/IOT_config_rest >
<Files wsgi.py>
Require all granted
</Files>
</Directory>
WSGIDaemonProcess IOT_config_rest python-home=/var/www/iotconfigserver/venv python-path=/var/www/iotconfigserver/IOT_config_r$
WSGIProcessGroup IOT_config_rest
WSGIScriptAlias / /var/www/iotconfigserver/IOT_config_rest/IOT_config_rest/wsgi.py
</VirtualHost>
thanks to anyone trying to help
I could deploy by downgrading python venv to 3.6, but I still don't know why

Permission denied when importing paramiko from flask app -apache wsgi mod

I've been trying to deploy my flask app using apache as a server(wsgi_mod). I created all the necessary files (.wsgi and .conf file for apache).
But when i request the page i get a 500 error. Checking the logs shows a
[Fri Jul 05 12:39:18.746453 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] mod_wsgi (pid=74305): Target WSGI script '/var/www/html/ExampleFlask/ExampleFlask/my_flask_app.wsgi' cannot be loaded as Python module.
[Fri Jul 05 12:39:18.746912 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] mod_wsgi (pid=74305): Exception occurred processing WSGI script '/var/www/html/ExampleFlask/ExampleFlask/my_flask_app.wsgi'.
[Fri Jul 05 12:39:18.750486 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] Traceback (most recent call last):
[Fri Jul 05 12:39:18.750808 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/var/www/html/ExampleFlask/ExampleFlask/my_flask_app.wsgi", line 6, in <module>
[Fri Jul 05 12:39:18.750995 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] from my_flask_app import app as application
[Fri Jul 05 12:39:18.751224 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/var/www/html/ExampleFlask/ExampleFlask/my_flask_app.py", line 2, in <module>
[Fri Jul 05 12:39:18.751411 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] import paramiko
[Fri Jul 05 12:39:18.751600 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/paramiko/__init__.py", line 30, in <module>
[Fri Jul 05 12:39:18.751819 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] from paramiko.transport import SecurityOptions, Transport
[Fri Jul 05 12:39:18.752023 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/paramiko/transport.py", line 32, in <module>
[Fri Jul 05 12:39:18.752224 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] from cryptography.hazmat.backends import default_backend
[Fri Jul 05 12:39:18.752446 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/cryptography/hazmat/backends/__init__.py", line 7, in <module>
[Fri Jul 05 12:39:18.752625 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] import pkg_resources
[Fri Jul 05 12:39:18.752834 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 3019, in <module>
[Fri Jul 05 12:39:18.753009 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] #_call_aside
[Fri Jul 05 12:39:18.753215 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 3003, in _call_aside
[Fri Jul 05 12:39:18.753405 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] f(*args, **kwargs)
[Fri Jul 05 12:39:18.753597 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 3032, in _initialize_master_working_set
[Fri Jul 05 12:39:18.753806 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] working_set = WorkingSet._build_master()
[Fri Jul 05 12:39:18.754000 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 646, in _build_master
[Fri Jul 05 12:39:18.754175 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] ws = cls()
[Fri Jul 05 12:39:18.754390 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 639, in __init__
[Fri Jul 05 12:39:18.754590 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] self.add_entry(entry)
[Fri Jul 05 12:39:18.754782 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 695, in add_entry
[Fri Jul 05 12:39:18.754981 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] for dist in find_distributions(entry, True):
[Fri Jul 05 12:39:18.755178 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 2012, in find_on_path
[Fri Jul 05 12:39:18.755382 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] if len(os.listdir(fullpath)) == 0:
[Fri Jul 05 12:39:18.755643 2019] [wsgi:error] [pid 74305] [remote 10.1.1.50:41450] PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.5/dist-packages/Werkzeug-0.15.4.dist-info'
I'm trying to deploy this application in a debian 9 server. I've tested it on my kali box and it worked fine just by installing flask and paramiko and configuring apache.
I've tried rinstalling some packages like paramiko, flask and Werkzeug but with no success.
I even created a new app with a simple hello world message. It works fine until i import paramiko and then i get the "permission denined" error.
My test app contains three files.
my_flask_app.py
from flask import Flask
import paramiko
app = Flask(__name__)
#app.route("/")
def hello():
return "Hello world!"
if __name__ == "__main__":
app.run()
my_flask_app.wsgi
import logging
import sys
logging.basicConfig(stream=sys.stderr)
sys.path.insert(0, '/var/www/html/ExampleFlask/ExampleFlask/')
from my_flask_app import app as application
application.secret_key = 'thisisasecretkey'
my_flask_app.conf
<VirtualHost *:80>
# Add machine's IP address (use ifconfig command)
ServerName 10.1.1.50
# Give an alias to to start your website url with
WSGIScriptAlias /testFlask /var/www/html/ExampleFlask/ExampleFlask/my_flask_app.wsgi
WSGIDaemonProcess my_flask_app user=www-data group=www-data threads=5
WSGIProcessGroup my_flask_app
#WSGIScriptAlias /testFlask /var/www/html/benchmarkerPHP/benchmarkerPHP.wsgi
#<Directory /var/www/html/benchmarkerPHP/>
<Directory /var/www/html/ExampleFlask/ExampleFlask/>
# set permissions as per apache2.conf file
Options FollowSymLinks
AllowOverride None
Require all granted
</Directory>
ErrorLog ${APACHE_LOG_DIR}/error.log
LogLevel warn
CustomLog ${APACHE_LOG_DIR}/access.log combined
</VirtualHost>
The apache user didn't have the needed permission to read from that directory. We only to add the read permission for the other group with the following command :
chmod o+r /usr/local/lib/python3.5/dist-packages/*

Mysql not working with python 3.6 and django 1.9

I am trying to connect mysql db with django 1.9 and python version is 3.6. With database connection string I am getting the below error. If I comment out the database connection string the site is loading fine. Can anybody tell what is wrong in this.
[Wed Apr 05 07:01:08.287609 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] mod_wsgi (pid=29791): Target WSGI script '/home/abhadran/test/mysite/mysite/wsgi.py' cannot be loaded as Python module.
[Wed Apr 05 07:01:08.287675 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] mod_wsgi (pid=29791): Exception occurred processing WSGI script '/home/abhadran/test/mysite/mysite/wsgi.py'.
[Wed Apr 05 07:01:08.287705 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] Traceback (most recent call last):
[Wed Apr 05 07:01:08.287740 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] File "/home/abhadran/test/mysite/mysite/wsgi.py", line 20, in <module>
[Wed Apr 05 07:01:08.287787 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] application = get_wsgi_application()
[Wed Apr 05 07:01:08.287798 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] File "/home/abhadran/myenv/lib/python3.6/site-packages/django/core/wsgi.py", line 13, in get_wsgi_application
[Wed Apr 05 07:01:08.290733 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] django.setup(set_prefix=False)
[Wed Apr 05 07:01:08.290756 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] File "/home/abhadran/myenv/lib/python3.6/site-packages/django/__init__.py", line 27, in setup
[Wed Apr 05 07:01:08.290779 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] apps.populate(settings.INSTALLED_APPS)
[Wed Apr 05 07:01:08.290790 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] File "/home/abhadran/myenv/lib/python3.6/site-packages/django/apps/registry.py", line 78, in populate
[Wed Apr 05 07:01:08.291738 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] raise RuntimeError("populate() isn't reentrant")
[Wed Apr 05 07:01:08.291768 2017] [wsgi:error] [pid 29791] [remote 173.1.101.95:52570] RuntimeError: populate() isn't reentrant
My pip freeze
Django==1.9.12
django-tastypie==0.13.3
mod-wsgi==4.5.15
mysql-connector-python==2.0.4
mysqlclient==1.3.10
PyMySQL==0.6
python-dateutil==2.6.0
python-mimeparse==1.6.0
requests==2.13.0
six==1.10.0
DB Settings we are using to try to connect to the Mysql
DATABASES = {
'default': {
'ENGINE': 'django.db.backends.mysql',
'HOST': 'AAAAAAAAAAAAAAAAA',
'NAME': 'ZZZZZZZZZZZZZZZZ',
'USER': 'YYYYYYYYYYYYYYYY',
'PASSWORD': 'XXXXXXXXXXXX',
'PORT': '3306',
'OPTIONS': {
'init_command': 'SET storage_engine=INNODB',
},
}
}
Usually, this error means there is an error in the Django project somewhere. It could be hard to locate.
You can try multiple solutions like:
1. Restart Apache
2. Execute makemigrations and migrate Django commands
3. Modify your wsgi.py file so you can manage the exception
A little note, in the line File "/home/abhadran/myenv/lib/python3.6/site-packages/django/apps/registry.py" indicate that you're using Python 3.6 and not Python 3.5 as you mentioned in your description.
Python 3.6 is officially supported until Django 1.11, so you maybe must upgrade your Django version or downgrade your Python in your venv.
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