I have a dataset of samples covering multiple days, all with a timestamp.
I want to select rows within a specific time window. E.g. all rows that were generated between 1pm and 3 pm every day.
This is a sample of my data in a pandas dataframe:
22 22 2018-04-12T20:14:23Z 2018-04-12T21:14:23Z 0 6370.1
23 23 2018-04-12T21:14:23Z 2018-04-12T21:14:23Z 0 6368.8
24 24 2018-04-12T22:14:22Z 2018-04-13T01:14:23Z 0 6367.4
25 25 2018-04-12T23:14:22Z 2018-04-13T01:14:23Z 0 6365.8
26 26 2018-04-13T00:14:22Z 2018-04-13T01:14:23Z 0 6364.4
27 27 2018-04-13T01:14:22Z 2018-04-13T01:14:23Z 0 6362.7
28 28 2018-04-13T02:14:22Z 2018-04-13T05:14:22Z 0 6361.0
29 29 2018-04-13T03:14:22Z 2018-04-13T05:14:22Z 0 6359.3
.. ... ... ... ... ...
562 562 2018-05-05T08:13:21Z 2018-05-05T09:13:21Z 0 6300.9
563 563 2018-05-05T09:13:21Z 2018-05-05T09:13:21Z 0 6300.7
564 564 2018-05-05T10:13:14Z 2018-05-05T13:13:14Z 0 6300.2
565 565 2018-05-05T11:13:14Z 2018-05-05T13:13:14Z 0 6299.9
566 566 2018-05-05T12:13:14Z 2018-05-05T13:13:14Z 0 6299.6
How do I achieve that? I need to ignore the date and just evaluate the time component. I could traverse the dataframe in a loop and evaluate the date time in that way, but there must be a more simple way to do that..
I converted the messageDate which was read a a string to a dateTime by
df["messageDate"]=pd.to_datetime(df["messageDate"])
But after that I got stuck on how to filter on time only.
Any input appreciated.
datetime columns have DatetimeProperties object, from which you can extract datetime.time and filter on it:
import datetime
df = pd.DataFrame(
[
'2018-04-12T12:00:00Z', '2018-04-12T14:00:00Z','2018-04-12T20:00:00Z',
'2018-04-13T12:00:00Z', '2018-04-13T14:00:00Z', '2018-04-13T20:00:00Z'
],
columns=['messageDate']
)
df
messageDate
# 0 2018-04-12 12:00:00
# 1 2018-04-12 14:00:00
# 2 2018-04-12 20:00:00
# 3 2018-04-13 12:00:00
# 4 2018-04-13 14:00:00
# 5 2018-04-13 20:00:00
df["messageDate"] = pd.to_datetime(df["messageDate"])
time_mask = (df['messageDate'].dt.hour >= 13) & \
(df['messageDate'].dt.hour <= 15)
df[time_mask]
# messageDate
# 1 2018-04-12 14:00:00
# 4 2018-04-13 14:00:00
I hope the code is self explanatory. You can always ask questions.
import pandas as pd
# Prepping data for example
dates = pd.date_range('1/1/2018', periods=7, freq='H')
data = {'A' : range(7)}
df = pd.DataFrame(index = dates, data = data)
print df
# A
# 2018-01-01 00:00:00 0
# 2018-01-01 01:00:00 1
# 2018-01-01 02:00:00 2
# 2018-01-01 03:00:00 3
# 2018-01-01 04:00:00 4
# 2018-01-01 05:00:00 5
# 2018-01-01 06:00:00 6
# Creating a mask to filter the value we with to have or not.
# Here, we use df.index because the index is our datetime.
# If the datetime is a column, you can always say df['column_name']
mask = (df.index > '2018-1-1 01:00:00') & (df.index < '2018-1-1 05:00:00')
print mask
# [False False True True True False False]
df_with_good_dates = df.loc[mask]
print df_with_good_dates
# A
# 2018-01-01 02:00:00 2
# 2018-01-01 03:00:00 3
# 2018-01-01 04:00:00 4
df=df[(df["messageDate"].apply(lambda x : x.hour)>13) & (df["messageDate"].apply(lambda x : x.hour)<15)]
You can use x.minute, x.second similarly.
try this after ensuring messageDate is indeed datetime format as you have done
df.set_index('messageDate',inplace=True)
choseInd = [ind for ind in df.index if (ind.hour>=13)&(ind.hour<=15)]
df_select = df.loc[choseInd]
you can do the same, even without making the datetime column as an index, as the answer with apply: lambda shows
it just makes your dataframe 'better looking' if the datetime is your index rather than numerical one.
Related
I have a dataframe:
data = {'time':['08:45:00', '09:30:00', '18:00:00', '15:00:00']}
df = pd.DataFrame(data)
I would like to convert the time based on conditions: if the hour is less than 9, I want to set it to 9 and if the hour is more than 17, I need to set it to 17.
I tried this approach:
df['time'] = np.where(((df['time'].dt.hour < 9) & (df['time'].dt.hour != 0)), dt.time(9, 00))
I am getting an error: Can only use .dt. accesor with datetimelike values.
Can anyone please help me with this? Thanks.
Here's a way to do what your question asks:
df.time = pd.to_datetime(df.time)
df.loc[df.time.dt.hour < 9, 'time'] = (df.time.astype('int64') + (9 - df.time.dt.hour)*3600*1000000000).astype('datetime64[ns]')
df.loc[df.time.dt.hour > 17, 'time'] = (df.time.astype('int64') + (17 - df.time.dt.hour)*3600*1000000000).astype('datetime64[ns]')
Input:
time
0 2022-06-06 08:45:00
1 2022-06-06 09:30:00
2 2022-06-06 18:00:00
3 2022-06-06 15:00:00
Output:
time
0 2022-06-06 09:45:00
1 2022-06-06 09:30:00
2 2022-06-06 17:00:00
3 2022-06-06 15:00:00
UPDATE:
Here's alternative code to try to address OP's error as described in the comments:
import pandas as pd
import datetime
data = {'time':['08:45:00', '09:30:00', '18:00:00', '15:00:00']}
df = pd.DataFrame(data)
print('', 'df loaded as strings:', df, sep='\n')
df.time = pd.to_datetime(df.time, format='%H:%M:%S')
print('', 'df converted to datetime by pd.to_datetime():', df, sep='\n')
df.loc[df.time.dt.hour < 9, 'time'] = (df.time.astype('int64') + (9 - df.time.dt.hour)*3600*1000000000).astype('datetime64[ns]')
df.loc[df.time.dt.hour > 17, 'time'] = (df.time.astype('int64') + (17 - df.time.dt.hour)*3600*1000000000).astype('datetime64[ns]')
df.time = [time.time() for time in pd.to_datetime(df.time)]
print('', 'df with time column adjusted to have hour between 9 and 17, converted to type "time":', df, sep='\n')
Output:
df loaded as strings:
time
0 08:45:00
1 09:30:00
2 18:00:00
3 15:00:00
df converted to datetime by pd.to_datetime():
time
0 1900-01-01 08:45:00
1 1900-01-01 09:30:00
2 1900-01-01 18:00:00
3 1900-01-01 15:00:00
df with time column adjusted to have hour between 9 and 17, converted to type "time":
time
0 09:45:00
1 09:30:00
2 17:00:00
3 15:00:00
UPDATE #2:
To not just change the hour for out-of-window times, but to simply apply 9:00 and 17:00 as min and max times, respectively (see OP's comment on this), you can do this:
df.loc[df['time'].dt.hour < 9, 'time'] = pd.to_datetime(pd.DataFrame({
'year':df['time'].dt.year, 'month':df['time'].dt.month, 'day':df['time'].dt.day,
'hour':[9]*len(df.index)}))
df.loc[df['time'].dt.hour > 17, 'time'] = pd.to_datetime(pd.DataFrame({
'year':df['time'].dt.year, 'month':df['time'].dt.month, 'day':df['time'].dt.day,
'hour':[17]*len(df.index)}))
df['time'] = [time.time() for time in pd.to_datetime(df['time'])]
Since your 'time' column contains strings they can kept as strings and assign new string values where appropriate. To filter for your criteria it is convenient to: create datetime Series from the 'time' column, create boolean Series by comparing the datetime Series with your criteria, use the boolean Series to filter the rows which need to be changed.
Your data:
import numpy as np
import pandas as pd
data = {'time':['08:45:00', '09:30:00', '18:00:00', '15:00:00']}
df = pd.DataFrame(data)
print(df.to_string())
>>>
time
0 08:45:00
1 09:30:00
2 18:00:00
3 15:00:00
Convert to datetime, make boolean Series with your criteria
dts = pd.to_datetime(df['time'])
lt_nine = dts.dt.hour < 9
gt_seventeen = (dts.dt.hour >= 17)
print(lt_nine)
print(gt_seventeen)
>>>
0 True
1 False
2 False
3 False
Name: time, dtype: bool
0 False
1 False
2 True
3 False
Name: time, dtype: bool
Use the boolean series to assign a new value:
df.loc[lt_nine,'time'] = '09:00:00'
df.loc[gt_seventeen,'time'] = '17:00:00'
print(df.to_string())
>>>
time
0 09:00:00
1 09:30:00
2 17:00:00
3 15:00:00
Or just stick with strings altogether and create the boolean Series using regex patterns and .str.match.
data = {'time':['08:45:00', '09:30:00', '18:00:00', '15:00:00','07:22:00','22:02:06']}
dg = pd.DataFrame(data)
print(dg.to_string())
>>>
time
0 08:45:00
1 09:30:00
2 18:00:00
3 15:00:00
4 07:22:00
5 22:02:06
# regex patterns
pattern_lt_nine = '^00|01|02|03|04|05|06|07|08'
pattern_gt_seventeen = '^17|18|19|20|21|22|23'
Make boolean Series and assign new values
gt_seventeen = dg['time'].str.match(pattern_gt_seventeen)
lt_nine = dg['time'].str.match(pattern_lt_nine)
dg.loc[lt_nine,'time'] = '09:00:00'
dg.loc[gt_seventeen,'time'] = '17:00:00'
print(dg.to_string())
>>>
time
0 09:00:00
1 09:30:00
2 17:00:00
3 15:00:00
4 09:00:00
5 17:00:00
Time series / date functionality
Working with text data
So I am reading in a csv file of a 30 minute timeseries going from "2015-01-01 00:00" upto and including "2020-12-31 23:30". There are five sets of these timeseries, each being at a certain location, and there are 105215 rows going down for each 30 minutes. My job is to go through and find the timedelta between each row, for each column. It should be 30 minutes for each one, except sometimes it isn't, and I have to find that.
So far I'm reading in the data fine via
ca_time = np.array(ca.iloc[0:, 1], dtype= "datetime64")
ny_time = np.array(ny.iloc[0:, 1], dtype = "datetime64")
tx_time = np.array(tx.iloc[0:, 1], dtype = "datetime64")
#I'm then passing these to a pandas dataframe for more convenient manipulation
frame_ca = pd.DataFrame(data = ca_time, dtype = "datetime64[s]")
frame_ny = pd.DataFrame(data = ny_time, dtype = "datetime64[s]")
frame_tx = pd.DataFrame(data = tx_time, dtype = "datetime64[s]")
#Then concatenating them into an array with 100k+ rows, and the five columns represent each location
full_array = pd.concat([frame_ca, frame_ny, frame_tx], axis = 1)
I now want to find the timedelta between each cell for each respective location.
Currently I'm trying this as a simply test
first_row = full_array2.loc[1:1, :1]
second_row = full_array2.loc[2:2, :1]
delta = first_row - second_row
I'm getting back
0 0 0
1 NaT NaT NaT
2 NaT NaT NaT
These seems simple enough but don't know how I'm getting Not a Time here.
For reference, below are both those rows I'm trying to subtract
ca ny tx fl az
1 2015-01-01 01:00:00 2015-01-01 01:00:00 2015-01-01 01:00:00 2015-01-01 01:00:00 2015-01-01 01:00:00, 0 0 0 0 0
2 2015-01-01 01:30:00 2015-01-01 01:30:00 2015-01-01 01:30:00 2015-01-01 01:30:00 2015-01-01 01:30:00
Any help appreciated!
I have a column with hh:mm:ss and a separate column with the decimal seconds.
I have quite a horrible text files to process and the decimal value of my time is separated into another column. Now I'd like to concatenate them back in.
For example:
df = {'Time':['01:00:00','01:00:00 AM','01:00:01 AM','01:00:01 AM'],
'DecimalSecond':['14','178','158','75']}
I tried the following but it didn't work. It gives me "01:00:00 AM.14" LOL
df = df['Time2'] = df['Time'].map(str) + '.' + df['DecimalSecond'].map(str)
The goal is to come up with one column named "Time2" which has the first row 01:00:00.14 AM, second row 01.00.00.178 AM, etc)
Thank you for the help.
You can convert ouput to datetimes and then call Series.dt.time:
#Time column is splitted by space and extracted values before first space
s = df['Time'].astype(str).str.split().str[0] + '.' + df['DecimalSecond'].astype(str)
df['Time2'] = pd.to_datetime(s).dt.time
print (df)
Time DecimalSecond Time2
0 01:00:00 14 01:00:00.140000
1 01:00:00 AM 178 01:00:00.178000
2 01:00:01 AM 158 01:00:01.158000
3 01:00:01 AM 75 01:00:01.750000
Please see the python code below
In [1]:
import pandas as pd
In [2]:
df = pd.DataFrame({'Time':['01:00:00','01:00:00','01:00:01','01:00:01'],
'DecimalSecond':['14','178','158','75']})
In [3]:
df['Time2'] = df[['Time','DecimalSecond']].apply(lambda x: ' '.join(x), axis = 1)
print(df)
Time DecimalSecond Time2
0 01:00:00 14 01:00:00 14
1 01:00:00 178 01:00:00 178
2 01:00:01 158 01:00:01 158
3 01:00:01 75 01:00:01 75
In [4]:
df.iloc[:,2]
Out[4]:
0 01:00:00 14
1 01:00:00 178
2 01:00:01 158
3 01:00:01 75
Name: Time2, dtype: object
I have a dataframe like this with two date columns and a quamtity column :
start_date end_date qty
1 2018-01-01 2018-01-08 23
2 2018-01-08 2018-01-15 21
3 2018-01-15 2018-01-22 5
4 2018-01-22 2018-01-29 12
I have a second dataframe with just column containing yearly holidays for a couple of years, like this:
holiday
1 2018-01-01
2 2018-01-27
3 2018-12-25
4 2018-12-26
I would like to go through the first dataframe row by row and assign boolean value to a new column holidays if a date in the second data frame falls between the date values of the first date frame. The result would look like this:
start_date end_date qty holidays
1 2018-01-01 2018-01-08 23 True
2 2018-01-08 2018-01-15 21 False
3 2018-01-15 2018-01-22 5 False
4 2018-01-22 2018-01-29 12 True
When I try to do that with a for loop I get the following error:
ValueError: Can only compare identically-labeled Series objects
An answer would be appreciated.
If you want a fully-vectorized solution, consider using the underlying numpy arrays:
import numpy as np
def holiday_arr(start, end, holidays):
start = start.reshape((-1, 1))
end = end.reshape((-1, 1))
holidays = holidays.reshape((1, -1))
result = np.any(
(start <= holiday) & (holiday <= end),
axis=1
)
return result
If you have your dataframes as above (calling them df1 and df2), you can obtain your desired result by running:
df1["contains_holiday"] = holiday_arr(
df1["start_date"].to_numpy(),
df1["end_date"].to_numpy(),
df2["holiday"].to_numpy()
)
df1 then looks like:
start_date end_date qty contains_holiday
1 2018-01-01 2018-01-08 23 True
2 2018-01-08 2018-01-15 21 False
3 2018-01-15 2018-01-22 5 False
4 2018-01-22 2018-01-29 12 True
try:
def _is_holiday(row, df2):
return ((df2['holiday'] >= row['start_date']) & (df2['holiday'] <= row['end_date'])).any()
df1.apply(lambda x: _is_holiday(x, df2), axis=1)
I'm not sure why you would want to go row-by-row. But boolean comparisons would be way faster.
df['holiday'] = ((df2.holiday >= df.start_date) & (df2.holiday <= df.end_date))
Time
>>> 1000 loops, best of 3: 1.05 ms per loop
Quoting #hchw solution (row-by-row)
def _is_holiday(row, df2):
return ((df2['holiday'] >= row['start_date']) & (df2['holiday'] <= row['end_date'])).any()
df.apply(lambda x: _is_holiday(x, df2), axis=1)
>>> The slowest run took 4.89 times longer than the fastest. This could mean that an intermediate result is being cached.
100 loops, best of 3: 4.46 ms per loop
Try IntervalIndex.contains with list comprehensiont and np.sum
iix = pd.IntervalIndex.from_arrays(df1.start_date, df1.end_date, closed='both')
df1['holidays'] = np.sum([iix.contains(x) for x in df2.holiday], axis=0) >= 1
Out[812]:
start_date end_date qty holidays
1 2018-01-01 2018-01-08 23 True
2 2018-01-08 2018-01-15 21 False
3 2018-01-15 2018-01-22 5 False
4 2018-01-22 2018-01-29 12 True
Note: I assume start_date, end_date, holiday columns are in datetime format. If they are not, you need to convert them before run above command as follows
df1.start_date = pd.to_datetime(df1.start_date)
df1.end_date = pd.to_datetime(df1.end_date)
df2.holiday = pd.to_datetime(df2.holiday)
I have a dataframe (imported from Excel) which looks like this:
Date Period
0 2017-03-02 2017-03-01 00:00:00
1 2017-03-02 2017-04-01 00:00:00
2 2017-03-02 2017-05-01 00:00:00
3 2017-03-02 2017-06-01 00:00:00
4 2017-03-02 2017-07-01 00:00:00
5 2017-03-02 2017-08-01 00:00:00
6 2017-03-02 2017-09-01 00:00:00
7 2017-03-02 2017-10-01 00:00:00
8 2017-03-02 2017-11-01 00:00:00
9 2017-03-02 2017-12-01 00:00:00
10 2017-03-02 Q217
11 2017-03-02 Q317
12 2017-03-02 Q417
13 2017-03-02 Q118
14 2017-03-02 Q218
15 2017-03-02 Q318
16 2017-03-02 Q418
17 2017-03-02 2018
I am trying to convert all the 'Period' column into a consistent format. Some elements look already in the datetime format, others are converted to string (ex. Q217), others to int (ex 2018). Which is the fastest way to convert everything in a datetime? I was trying with some masking, like this:
mask = df['Period'].str.startswith('Q', na = False)
list_quarter = df_final[mask]['Period'].tolist()
quarter_convert = {'1':'31/03', '2':'30/06', '3':'31/08', '4':'30/12'}
counter = 0
for element in list_quarter:
element = element[1:]
quarter = element[0]
year = element[1:]
daymonth = ''.join(str(quarter_convert.get(word, word)) for word in quarter)
final = daymonth+'/'+year
list_quarter[counter] = final
counter+=1
However it fails when I try to substitute the modified elements in the original column:
df_nwe_final['Period'] = np.where(mask, pd.Series(list_quarter), df_nwe_final['Period'])
Of course I would need to do more or less the same with the 2018 type formats. However, I am sure I am missing something here, and there should be a much faster solution. Some fresh ideas from you would help! Thank you.
Reusing the code you show, let's first write a function that converts the Q-string to a datetime format (I adjusted to final format a little bit):
def convert_q_string(element):
quarter_convert = {'1':'03-31', '2':'06-30', '3':'08-31', '4':'12-30'}
element = element[1:]
quarter = element[0]
year = element[1:]
daymonth = ''.join(str(quarter_convert.get(word, word)) for word in quarter)
final = '20' + year + '-' + daymonth
return final
We can now use this to first convert all 'Q'-strings, and then pd.to_datetime to convert all elements to proper datetime values:
In [2]: s = pd.Series(['2017-03-01 00:00:00', 'Q217', '2018'])
In [3]: mask = s.str.startswith('Q')
In [4]: s[mask] = s[mask].map(convert_q_string)
In [5]: s
Out[5]:
0 2017-03-01 00:00:00
1 2017-06-30
2 2018
dtype: object
In [6]: pd.to_datetime(s)
Out[6]:
0 2017-03-01
1 2017-06-30
2 2018-01-01
dtype: datetime64[ns]