nested JSON to CSV using python script - python

i'm new to python and I've got a large json file that I need to convert to csv - below is a sample
{ "status": "success","Name": "Theresa May","Location": "87654321","AccountCategory": "Business","AccountType": "Current","TicketNo": "12345-12","AvailableBal": "12775.0400","BookBa": "123475.0400","TotalCredit": "1234567","TotalDebit": "0","Usage": "5","Period": "May 11 2014 to Jul 11 2014","Currency": "GBP","Applicants": "Angel","Signatories": [{"Name": "Not Available","BVB":"Not Available"}],"Details": [{"PTransactionDate":"24-Jul-14","PValueDate":"24-Jul-13","PNarration":"Cash Deposit","PCredit":"0.0000","PDebit":"40003.0000","PBalance":"40003.0000"},{"PTransactionDate":"24-Jul-14","PValueDate":"23-Jul-14","PTest":"Cash Deposit","PCredit":"0.0000","PDebit":"40003.0000","PBalance":"40003.0000"},{"PTransactionDate":"25-Jul-14","PValueDate":"22-Jul-14","PTest":"Cash Deposit","PCredit":"0.0000","PDebit":"40003.0000","PBalance":"40003.0000"},{"PTransactionDate":"25-Jul-14","PValueDate":"21-Jul-14","PTest":"Cash Deposit","PCredit":"0.0000","PDebit":"40003.0000","PBalance":"40003.0000"},{"PTransactionDate":"25-Jul-14","PValueDate":"20-Jul-14","PTest":"Cash Deposit","PCredit":"0.0000","PDebit":"40003.0000","PBalance":"40003.0000"}]}
I need this to show up as
name, status, location, accountcategory, accounttype, availablebal, totalcredit, totaldebit, etc as columns,
with the pcredit, pdebit, pbalance, ptransactiondate, pvaluedate and 'ptest' having new values each row as the JSON file shows
I've managed to put this script below together looking online, but it's showing me an empty csv file at the end. What have I done wrong? I have used the online json to csv converters and it works, however as these are sensitive files I'm hoping to write/manage with my own script so I can see exactly how it works. Please see below for my python script - can I have some advise on what to change? thanks
import csv
import json
infile = open("BankStatementJSON1.json","r")
outfile = open("testing.csv","w")
writer = csv.writer(outfile)
for row in json.loads(infile.read()):
writer.writerow(row)
import csv, json, sys
# if you are not using utf-8 files, remove the next line
sys.setdefaultencoding("UTF-8") # set the encode to utf8
# check if you pass the input file and output file
if sys.argv[1] is not None and sys.argv[2] is not None:
fileInput = sys.argv[1]
fileOutput = sys.argv[2]
inputFile = open("BankStatementJSON1.json","r") # open json file
outputFile = open("testing2.csv","w") # load csv file
data = json.load("BankStatementJSON1.json") # load json content
inputFile.close() # close the input file
output = csv.writer("testing.csv") # create a csv.write
output.writerow(data[0].keys()) # header row
for row in data:
output.writerow(row.values()) # values row

This works for the JSON example you posted. The issue is that you have nested dict and you can't create sub-headers and sub rows for pcredit, pdebit, pbalance, ptransactiondate, pvaluedate and ptest as you want.
You can use csv.DictWriter:
import csv
import json
with open("BankStatementJSON1.json", "r") as inputFile: # open json file
data = json.loads(inputFile.read()) # load json content
with open("testing.csv", "w") as outputFile: # open csv file
output = csv.DictWriter(outputFile, data.keys()) # create a writer
output.writeheader()
output.writerow(data)

Make sure you're closing the output file at the end as well.

Related

python cant read csv file downloaded from azure dev ops (utf-8)

I created an azure dev ops query, and chose 'download results as csv' which gave me a csv file. If I open this csv in vscode, I can see in the bottom right corner it says UTF-8 with BOM
I am trying to write some python function that will read in each value of this csv file. I can not rely parsing text myself and spitting values based on the , comma character, because I will have values that include commas inside them.
If I open my csv in excel, everything is organized perfectly. But if I try to parse the file in python, it reads in every row as a single string separated by commas (bad)
from csv import reader
import csv
# read in csv, convert to map organized by 'id' as index root parent value
def read_csv_as_map(csv_filename, id_format, encodingVar):
print('filename: '+csv_filename+', id_format: '+id_format+', encoding: '+encodingVar)
dict={}
dict['rows']={}
try:
with open(csv_filename, 'r', encoding=encodingVar) as read_obj:
csv_reader = reader(read_obj, delimiter='\t')
csv_cols = None
for row in csv_reader:
print('row=',row)
print('done')
return dict
except Exception as e:
print('err=',e)
return {}
ads_dict = read_csv_as_map(
csv_filename="csv_migration\\ads-test-direct-download.csv",
id_format='ID',
encodingVar='utf-8-sig'
)
console output:
filename: csv_migration\ads-test-direct-download.csv, id_format: ID, encoding: utf-8-sig
row= ['Title,State,Work Item Type,ID,12NC']
row= ['TITLE,WITH COMMAS,To Do,NAME,6034,"value,with,commas"']
done
How can I read this file in python so it separates each value into a list? Instead of this single string
I get the same result with encodingVar='utf-8', should I open my csv in some app like notepadd++ and convert it to utf-16? My code works great for .csv files with utf-16 encoding, it can parse each individual value into a list no problem. why wont this work with a utf-8 DOM csv, even when excel can parse the individual values perfectly fine?
csv file: https://file.io/TXh6uyXKZaug
from csv import reader
import csv
# read in csv, convert to map organized by 'id' as index root parent value
def read_csv_as_map(csv_filename, id_format, encodingVar):
print('filename: '+csv_filename+', id_format: '+id_format+', encoding: '+encodingVar)
dict={}
dict['rows']={}
try:
with open(csv_filename, 'r', encoding=encodingVar) as read_obj:
csv_reader = reader(read_obj, delimiter='\t')
csv_cols = None
for row in csv_reader:
row_as_list = row.split(",") # <-- Gets line as list!
print('row=',row_as_list)
print('done')
return dict
except Exception as e:
print('err=',e)
return {}
ads_dict = read_csv_as_map(
csv_filename="csv_migration\\ads-test-direct-download.csv",
id_format='ID',
encodingVar='utf-8-sig'
)
This snippet splits the line into a list that you can index to get the information out

Python converts multiple JSON files in a folder directory to CSV

I have a lot of JSON files, I put them in my folder, I want to convert them to CSV format,
Should I use import glob? ? I am a novice, how can I modify my codeļ¼Œ
#-*-coding:utf-8-*-
import csv
import json
import sys
import codecs
def trans(path):
jsonData = codecs.open('C:/Users/jeri/Desktop/1', '*.json', 'r', 'utf-8')
# csvfile = open(path+'.csv', 'w')
# csvfile = open(path+'.csv', 'wb')
csvfile = open('C:/Users/jeri/Desktop/1.csv', 'w', encoding='utf-8', newline='')
writer = csv.writer(csvfile, delimiter=',')
flag = True
for line in jsonData:
dic = json.loads(line)
if flag:
keys = list(dic.keys())
print(keys)
flag = False
writer.writerow(list(dic.values()))
jsonData.close()
csvfile.close()
if __name__ == '__main__':
path=str(sys.argv[0])
print(path)
trans(path)
Yes using glob would be a good way to iterate through the .json files in your folder! But glob doesn't have anything to do with the reading/writing of files. After importing glob, you can use it like this:
for curr_file in glob.glob("*.json"):
# Process each file here
I see that you've used the json module to read in your code snippet. I'd say the better way to go about it is to use pandas.
df = pd.read_json()
I say this because with the pandas library, you can simply convert from .json to .csv using
df.to_csv('file_name.csv')
Combining the three together, it would look like this:
for curr_file in glob.glob("*.json"):
# Process each file here
df = pd.read_json(curr_file)
df.to_csv('file_name.csv')
Also, note that if your json has nested objects, it can't be directly converted to csv, you'll have to settle the organization of data prior to the conversion.

Read a file from a folder and extract a specific key from the file and save as in CSV file

I'm new to Python and the task I am performing is to extract a specific key value from a list of .iris ( which contains the list of nested dictionary format) files in a specific directory.
I wanted to extract the specific value and save it as a new .csv file and repeat it for all other files.
Below is my sample of .iris file from which I should extract only for the these keys ('uid','enabled','login','name').
{"streamType":"user",
"uid":17182,
"enabled":true,
"login":"xyz",
"name":"abcdef",
"comment":"",
"authSms":"",
"email":"",
"phone":"",
"location":"",
"extraLdapOu":"",
"mand":997,
"global":{
"userAccount":"View",
"uid":"",
"retention":"No",
"enabled":"",
"messages":"Change"},
"grants":[{"mand":997,"role":1051,"passOnToSubMand":true}],
I am trying to convert the .iris file to .json and reading the files one by, but unfortunately, I am not getting the exact output as desired.
Please, could anyone help me?
My code (added from comments):
import os
import csv
path = ''
os.chdir(path)
# Read iris File
def read_iris_file(file_path):
with open(file_path, 'r') as f:
print(f.read())
# iterate through all files
for file in os.listdir():
# Check whether file is in iris format or not
if file.endswith(".iris"):
file_path = f"{path}\{file}"
# call read iris file function
print(read_iris_file(file_path))
Your files contain data in JSON format, so we can use built-in json module to parse it. To iterate over files with certain extension you can use pathlib.glob() with next pattern "*.iris". Then we can use csv.DictWriter() and pass "ignore" to extrasaction argument which will make DictWriter ignore keys which we don't need and write only those which we passed to fieldnames argument.
Code:
import csv
import json
from pathlib import Path
path = Path(r"path/to/folder")
keys = "uid", "enabled", "login", "name"
with open(path / "result.csv", "w", newline="") as out_f:
writer = csv.DictWriter(out_f, fieldnames=keys, extrasaction='ignore')
writer.writeheader()
for file in path.glob("*.iris"):
with open(file) as inp_f:
data = json.load(inp_f)
writer.writerow(data)
Try the below (the key point here is loading the iris file using ast)
import ast
fields = ('uid','enabled','login','name')
with open('my.iris') as f1:
data = ast.literal_eval(f1.read())
with open('my.csv','w') as f2:
f2.write(','.join(fields) + '\n')
f2.write(','.join(data[f] for f in fields) + '\n')
my.csv
uid,enabled,login,name
17182,true,xyz,abcdef

Empty CSV file when writing lots of data

I am currently conducting a data scraping project with Python 3 and am attempting to write the scraped data to a CSV file. My current process to do it is this:
import csv
outputFile = csv.writer(open('myFilepath', 'w'))
outputFile.writerow(['header1', 'header2'...])
for each in data:
scrapedData = scrap(each)
outputFile.writerow([scrapedData.get('header1', 'header 1 NA'), ...])
Once this script is finished, however, the CSV file is blank. If I just run:
import csv
outputFile = csv.writer(open('myFilepath', 'w'))
outputFile.writerow(['header1', 'header2'...])
a CSV file is produced containing the headers:
header1,header2,..
If I just scrape 1 in data, for example:
outputFile.writerow(['header1', 'header2'...])
scrapedData = scrap(data[0])
outputFile.writerow([scrapedData.get('header1', 'header 1 NA'), ...])
a CSV file will be created including both the headers and the data for data[0]:
header1,header2,..
header1 data for data[0], header1 data for data[0]
Why is this the case?
When you open a file with w, it erases the previous data
From the docs
w: open for writing, truncating the file first
So when you open the file after writing scrape data with w, you just get a blank file and then you write the header on it so you only see the header. Try replacing w with a. So the new call to open the file would look like
outputFile = csv.writer(open('myFilepath', 'a'))
You can fine more information about the modes to open the file here
Ref: How do you append to a file?
Edit after DYZ's comment:
You should also be closing the file after you are done appending. I would suggest using the file like the:
with open('path/to/file', 'a') as file:
outputFile = csv.writer(file)
# Do your work with the file
This way you don't have to worry about remembering to close it. Once the code exists the with block, the file will be closed.
I would use Pandas for this:
import pandas as pd
headers = ['header1', 'header2', ...]
scraped_df = pd.DataFrame(data, columns=headers)
scraped_df.to_csv('filepath.csv')
Here I'm assuming your data object is a list of lists.

Read csv from url one line at the time in Python 3.X

I have to read an online csv-file into a postgres database, and in that context I have some problems reading the online csv-file properly.
If I just import the file it reads as bytes, so I have to decode it. During the decoding it, however, seems that the entire file is turned into one long string.
# Libraries
import csv
import urllib.request
# Function for importing csv from url
def csv_import(url):
url_open = urllib.request.urlopen(url)
csvfile = csv.reader(url_open.decode('utf-8'), delimiter=',')
return csvfile;
# Reading file
p_pladser = csv_import("http://wfs-kbhkort.kk.dk/k101/ows?service=WFS&version=1.0.0&request=GetFeature&typeName=k101:p_pladser&outputFormat=csv&SRSNAME=EPSG:4326")
When I try to read the imported file line by line it only reads one character at the time.
for row in p_pladser:
print(row)
break
['F']
Can you help me identify where it goes wrong? I am using Python 3.6.
EDIT: Per request my solution in R
# Loading library
library(RPostgreSQL)
# Reading dataframe
p_pladser = read.csv("http://wfs-kbhkort.kk.dk/k101/ows?service=WFS&version=1.0.0&request=GetFeature&typeName=k101:p_pladser&outputFormat=csv&SRSNAME=EPSG:4326", encoding = "UTF-8", stringsAsFactors = FALSE)
# Creating database connection
drv <- dbDriver("PostgreSQL")
con <- dbConnect(drv, dbname = "secretdatabase", host = "secrethost", user = "secretuser", password = "secretpassword")
# Uploading dataframe to postgres database
dbWriteTable(con, "p_pladser", p_pladser , append = TRUE, row.names = FALSE, encoding = "UTF-8")
I have to upload several tables for 10,000 to 100,000 rows, and it total in R it takes 1-2 seconds to upload them all.
csv.reader expect as argument a file like object and not a string. You have 2 options here:
either you read the data into a string (as you currently do) and then use a io.StringIO to build a file like object around that string:
def csv_import(url):
url_open = urllib.request.urlopen(url)
csvfile = csv.reader(io.StringIO(url_open.read().decode('utf-8')), delimiter=',')
return csvfile;
or you use a io.TextIOWrapper around the binary stream provided by urllib.request:
def csv_import(url):
url_open = urllib.request.urlopen(url)
csvfile = csv.reader(io.TextIOWrapper(url_open, encoding = 'utf-8'), delimiter=',')
return csvfile;
How about loading the CSV with pandas!
import pandas as pd
csv = pd.read_csv("http://wfs-kbhkort.kk.dk/k101/ows?service=WFS&version=1.0.0&request=GetFeature&typeName=k101:p_pladser&outputFormat=csv&SRSNAME=EPSG:4326")
print csv.columns
OR if you have the CSV downloaded in your machine, then directly
csv = pd.read_csv("<path_to_csv>")
Ok! You may consider passing delimiter and quotechar arguments to csv.reader, because the CSV contains quotes as well! Something like this,
with open('p_pladser.csv') as f:
rows = csv.reader(f, delimiter=',', quotechar='"')
for row in rows:
print(row)

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