Install labelme annotation tools - python

I tried to install labelme annotation tools on Mac os 10.11.x from this link labelme using the virtual environment method listed below:
# python3
conda create --name=labelme python=3.6
source activate labelme
# conda install pyqt
pip3 install pyqt5 # pyqt5 can be installed via pip on python3
pip3 install labelme
When I run labelme on terminal I get this error:
File "/Users/xxx/anaconda3/lib/python3.6/site-packages/labelme/app.py", line 32, in <module>
from PyQt5.QtGui import *
ImportError: dlopen(/usr/local/lib/python2.7/site-packages/PyQt5/QtGui.so, 2):
Symbol not found: _PyInt_AsLong
Referenced from: /usr/local/lib/python2.7/site-packages/PyQt5/QtGui.so
Expected in: flat namespace in /usr/local/lib/python2.7/site-packages/PyQt5/QtGui.so
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/Users/xxxx/anaconda3/bin/labelme", line 7, in <module>
from labelme.app import main
File "/Users/rafikgouiaa/anaconda3/lib/python3.6/site-packages/labelme/app.py", line 37, in <module>
from PyQt4.QtGui import *
ModuleNotFoundError: No module named 'PyQt4'**
It seems that labelme looks for pyqt5 in Python 2.7, not in Python 3.6 where pyqt5 is installed.
Any help for installing labelme or any other tools other than labelme and Matlab tools?

Related

Spyder does not open from anaconda

Recently, I had to reinstall anaconda on a new computer.
I downloaded the latest version from anaconda's website, and installed it just as I did before.
Now, when I open anaconda interface and try to run Spyder.exe, I get this message:
Traceback (most recent call last):
File "C:\Users\aabramzonx0108132\AppData\Local\Continuum\anaconda3\lib\site-packages\qtpy\QtWebEngineWidgets.py", line 22, in
from PyQt5.QtWebEngineWidgets import QWebEnginePage
ImportError: DLL load failed: The specified procedure could not be found.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Users\aabramzonx0108132\AppData\Local\Continuum\anaconda3\Scripts\spyder-script.py", line
10, in
sys.exit(main())
File "C:\Users\aabramzonx0108132\AppData\Local\Continuum\anaconda3\lib\site-
packages\spyder\app\start.py", line 186, in main
from spyder.app import mainwindow
File "C:\Users\aabramzonx0108132\AppData\Local\Continuum\anaconda3\lib\site-
packages\spyder\app\mainwindow.py", line 90, in
from qtpy import QtWebEngineWidgets # analysis:ignore
File "C:\Users\aabramzonx0108132\AppData\Local\Continuum\anaconda3\lib\site-
packages\qtpy\QtWebEngineWidgets.py", line 26, in
from PyQt5.QtWebKitWidgets import QWebPage as QWebEnginePage
ModuleNotFoundError: No module named 'PyQt5.QtWebKitWidgets'
Could it be that I installed something wrong?
This has to do with PyQt5 module. To fix this issue try removing PyQt5
pip uninstall PyQt5
If that does not work try to reinstall it using
conda install -f qt=5 pyqt=5
Similar post here: 54869374
Anaconda 2020.07, Linux, x84_64
I do not know why, but installing
pip install pyqtwebengine
fixed spyder, which was part of the Anaconda installation.
Details:
This was tested on a fresh fedora-33 virtual machine with Anaconda version Anaconda3-2020.07-Linux-x86_64. pyqtwebengine was not installed before. Trying to uninstall it, gave a WARNING: Skipping pyqtwebengine as it is not installed.

I am unable to import psycopg2 from Jupyter notebook or Jupyter Lab on Mac. I have a clean install of Catalina

A similar report was posted, but the suggested solutions do not work.
---- from Jupyter ----
Import psycopg2
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-2-7d2da0a5d979> in <module>
----> 1 import psycopg2
ModuleNotFoundError: No module named 'psycopg2'
If I run python3 from Mac terminal and then import psycopg2 that works.
If I run python3 from Jupyterlab terminal this does not work. I get the following error after running import pyscopg2
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/psycopg2/__init__.py", line 50, in <module>
from psycopg2._psycopg import ( # noqa
ImportError: dlopen(/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/psycopg2/_psycopg.cpython-38-darwin.so, 2): Library not loaded: #rpath/libssl.1.1.dylib
Referenced from: /Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/psycopg2/_psycopg.cpython-38-darwin.so
Reason: image not found
echo $PATH from Mac terminal is
/Users/greg/opt/miniconda3/bin:/Users/greg/opt/anaconda3/condabin:/Library/Frameworks/Python.framework/Versions/3.8/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin
echo $PATH from Jupyterlab terminal is
/Library/Frameworks/Python.framework/Versions/3.8/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Users/greg/opt/miniconda3/bin:/Users/greg/opt/anaconda3/condabin
These look the same, just in a different order.
I have tried pip install psycopg2 both with and without the binary option.Either way, it says already satisfied.
I have tried
conda install -c anaconda psycopg2
Also tried installing postgresql both from the postgresql.org, and brew install psycopg2. Both worked, but no luck with Jupyterlab.
try installing the package using: pip install psycopg2-binary. This should work.
For more information, visit: https://www.psycopg.org/docs/install.html

Spyder3 not launching - How to launch? [duplicate]

Since updating my python3 packages via python3-pip on Ubuntu 18.04.2 LTS I am unable to launch spyder as it appears that the QtWebKitWidgets module of the PyQt5 package has been deprecated. The following console output is produced upon entering spyder3 in the terminal:
Traceback (most recent call last):
File "/home/benjamin/.local/lib/python3.6/site-packages/qtpy/QtWebEngineWidgets.py", line 22, in <module>
from PyQt5.QtWebEngineWidgets import QWebEnginePage
ModuleNotFoundError: No module named 'PyQt5.QtWebEngineWidgets'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/benjamin/.local/bin/spyder3", line 11, in <module>
sys.exit(main())
File "/home/benjamin/.local/lib/python3.6/site-packages/spyder/app/start.py", line 178, in main
from spyder.app import mainwindow
File "/home/benjamin/.local/lib/python3.6/site-packages/spyder/app/mainwindow.py", line 90, in <module>
from qtpy import QtWebEngineWidgets # analysis:ignore
File "/home/benjamin/.local/lib/python3.6/site-packages/qtpy/QtWebEngineWidgets.py", line 26, in <module>
from PyQt5.QtWebKitWidgets import QWebPage as QWebEnginePage
ModuleNotFoundError: No module named 'PyQt5.QtWebKitWidgets'
Has anyone else stumbled across this problem, and could anyone suggest a solution?
I currently update my python3 packages via the following shell script:
#!/bin/sh
#================================#
# #
#### UPDATE PYTHON3 LIBRARIES ####
# #
#================================#
### Package List ###
# bs4 - web scraping
# keras - machine learning front end
# lifelines - survival analysis
# matplotlib - plots
# numpy - array-processing package
# pandas - data management
# scipy - open-source software for mathematics, science, and engineering
# seaborn - plots
# selenium - web scraping
# spyder - IDE
# statsmodels - basic statistical methods
# tensorflow - machine learning back end
PACKAGES='bs4 keras lifelines matplotlib numpy pandas scipy seaborn selenium spyder statsmodels tensorflow'
### Update via PIP3 ###
echo 'Updating packages ...'
pip3 install $PACKAGES --user --upgrade --upgrade-strategy="eager"
echo 'Update complete ...'
... and launch spyder using the following Gnome applications launcher link, located in ~/.local/share/applications:
[Desktop Entry]
Type=Application
Version=1.0
Name=Spyder3
GenericName=Spyder3
Comment=The Scientific Python Development Environment - Python 3
Icon=spyder3
TryExec=spyder3
Exec=spyder3 %F
Terminal=false
MimeType=text/x-python;
Categories=Development;Science;IDE;Qt;
Keywords=Development;Science;IDE;Qt;
StartupNotify=true
StartupWMClass=Spyder
(Spyder maintainer here) To fix this problem you also need to install pyqtwebengine (besides pyqt5), like this
pip install pyqtwebengine
Note: We realized WebEngine was separated from PyQt5 only after we released our last version (3.3.3). But that's going to be fixed in our next one (3.3.4), to be released in March/2019.

pyqt5 cannot install with python 3.5

I installed python 3.5 then install pyqt5.5.1, when installing the binary file under win7, it showed warning that it's built under python3.4.I installed to the python35 directory anyway.I can open Assistant in start menu.But in python it's not working:
from PyQt5.QtCore import * Traceback (most recent call last): File "", line 1, in
from PyQt5.QtCore import * ImportError: DLL load failed
Use pip to install the Windows wheel file
The installer were based on 3.4. So you can't use it.
Download LINK
Command line guide: pip install name_of_file.whl
PS: install SIP in the same way.

Python Basemap/Matplotlib Install

I am trying to install the base map for use with matplotlib python v2.7 running on Mac OSX Mavericks. I have all the latest versions of all modules (matplotlib, etc) running using anaconda, but keep getting the following error:
Traceback (most recent call last):
File "simpletest.py", line 1, in <module>
from mpl_toolkits.basemap import Basemap
File "/Users/felishalawrence/anaconda/lib/python2.7/site-packages/mpl_toolkits/basemap/__init__.py", line 37, in <module>
import _geoslib.so
ImportError: dlopen(/Users/felishalawrence/anaconda/lib/python2.7/site-packages/_geoslib.so, 2): Library not loaded: libgeos_c.1.dylib
Referenced from: /Users/felishalawrence/anaconda/lib/python2.7/site-packages/_geoslib.so
Reason: no suitable image found. Did find:
/usr/local/bin/gcc-4.9/libgeos_c.1.dylib: stat() failed with errno=20
Can someone please give me an idea of what is wrong? Thanks!
Try installing the following packages with Homebrew:
brew install numpy
brew install proj
brew install geos
export GEOS_DIR="/usr/local/Cellar/geos/3.10.3/"

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