Removing all pip packages installed at system level? - python

When I started learning Python I didn't know about virtualenv and so installed all my stuff at system level.
I wanted to do a full clean out to prevent issues. However, creating the requirements.txt and then trying to run uninstall on it throws the following error and doesn't complete any uninstalling. Any ideas what might be wrong?
> Exception:
Traceback (most recent call last):
File "/usr/local/lib/python2.7/site-packages/pip/basecommand.py", line 215, in main
status = self.run(options, args)
File "/usr/local/lib/python2.7/site-packages/pip/commands/uninstall.py", line 76, in run
requirement_set.uninstall(auto_confirm=options.yes)
File "/usr/local/lib/python2.7/site-packages/pip/req/req_set.py", line 346, in uninstall
req.uninstall(auto_confirm=auto_confirm)
File "/usr/local/lib/python2.7/site-packages/pip/req/req_install.py", line 754, in uninstall
paths_to_remove.remove(auto_confirm)
File "/usr/local/lib/python2.7/site-packages/pip/req/req_uninstall.py", line 115, in remove
renames(path, new_path)
File "/usr/local/lib/python2.7/site-packages/pip/utils/__init__.py", line 267, in renames
shutil.move(old, new)
File "/usr/local/Cellar/python/2.7.12_2/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 303, in move
os.unlink(src)
OSError: [Errno 13] Permission denied: '/usr/local/lib/python2.7/site-packages/awscli-1.11.83.dist-info/DESCRIPTION.rst'

Not an amazing solution but i rebooted terminal and tried sudo again and it cooperated this time... i cant offer more than that im afrad

Related

pip3 "build" will not install

when I try to install build with
sudo pip3 install build
the following error occurs:
Exception:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 143, in main
status = self.run(options, args)
File "/usr/lib/python3/dist-packages/pip/_internal/commands/install.py", line 386, in run
use_user_site=options.use_user_site,
File "/usr/lib/python3/dist-packages/pip/_internal/req/__init__.py", line 49, in install_given_reqs
**kwargs
File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 760, in install
use_user_site=use_user_site, pycompile=pycompile,
File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 382, in move_wheel_files
warn_script_location=warn_script_location,
File "/usr/lib/python3/dist-packages/pip/_internal/wheel.py", line 215, in move_wheel_files
prefix=prefix,
File "/usr/lib/python3/dist-packages/pip/_internal/locations.py", line 153, in distutils_scheme
d.parse_config_files()
File "/usr/lib/python3.7/distutils/dist.py", line 406, in parse_config_files
parser.read(filename)
File "/usr/lib/python3.7/configparser.py", line 696, in read
self._read(fp, filename)
File "/usr/lib/python3.7/configparser.py", line 1091, in _read
fpname, lineno)
configparser.DuplicateOptionError: While reading from 'setup.cfg' [line 10]: option 'url' in section 'metadata' already exists
while installing the collected packages. The install never completes; pip says it was never installed. I would greatly appreciate any help troubleshooting.
In the off chance anyone else has this problem, I found a temporary fix that will probably make python stop working in a few days.. I went to ln 1088-1090 of /usr/lib/python3.7/configparser.py and replaced that bit about raising an exception after an if statement with
while (self._strict and
(sectname, optname) in elements_added):
elements_added.pop()
This seemed to have fixed the problem, albeit not in the most pretty method, as installation pf build and use of sdist now works ok.

"OSError: [Errno 1] Operation not permitted" error when downloading Pandas on macOS

I tried installing Pandas on macOS.
It first tries to install Numpy, says
Found existing installation: numpy 1.8.0rc1
DEPRECATION: Uninstalling a distutils installed project (numpy) has been deprecated and will be removed in a future version. This is due to the fact that uninstalling a distutils project will only partially uninstall the project.
Uninstalling numpy-1.8.0rc1:
Exception:
Traceback (most recent call last):
File "/Library/Python/2.7/site-packages/pip/basecommand.py", line 215, in main
status = self.run(options, args)
File "/Library/Python/2.7/site-packages/pip/commands/install.py", line 342, in run
prefix=options.prefix_path,
File "/Library/Python/2.7/site-packages/pip/req/req_set.py", line 778, in install
requirement.uninstall(auto_confirm=True)
File "/Library/Python/2.7/site-packages/pip/req/req_install.py", line 754, in uninstall
paths_to_remove.remove(auto_confirm)
File "/Library/Python/2.7/site-packages/pip/req/req_uninstall.py", line 115, in remove
renames(path, new_path)
File "/Library/Python/2.7/site-packages/pip/utils/__init__.py", line 267, in renames
shutil.move(old, new)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 302, in move
copy2(src, real_dst)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 131, in copy2
copystat(src, dst)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 103, in copystat
os.chflags(dst, st.st_flags)
OSError: [Errno 1] Operation not permitted: '/var/folders/8y/lq4gsyx97_q171qrh2q18z0h0000gn/T/pip-9NwJUf-uninstall/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/numpy-1.8.0rc1-py2.7.egg-info'
Then fails to install Pandas. "pip list" shows numpy (1.8.0rc1) has been installed.
Thanks for the help.
When I use sudo, this happens.
I guess you need to run pip as super user or a system user that has the permission to write to Python package site directory;
I don't own a mac but I think the general course of action for you will be to try to install pandas as root like this:
sudo pip install -U pandas

Can't install Quandl on macOS Sierra

For a sentdex tutorial I had to install quandl, but whenever I try to install this python module in python2.7 I get a error:
Found existing installation: numpy 1.8.0rc1
DEPRECATION: Uninstalling a distutils installed project (numpy) has been deprecated and will be removed in a future version. This is due to the fact that uninstalling a distutils project will only partially uninstall the project.
Uninstalling numpy-1.8.0rc1:
Exception:
Traceback (most recent call last):
File "/Library/Python/2.7/site-packages/pip-9.0.1-py2.7.egg/pip/basecommand.py", line 215, in main
status = self.run(options, args)
File "/Library/Python/2.7/site-packages/pip-9.0.1-py2.7.egg/pip/commands/install.py", line 342, in run
prefix=options.prefix_path,
File "/Library/Python/2.7/site-packages/pip-9.0.1-
py2.7.egg/pip/req/req_set.py", line 778, in install
requirement.uninstall(auto_confirm=True)
File "/Library/Python/2.7/site-packages/pip-9.0.1-py2.7.egg/pip/req/req_install.py", line 754, in uninstall
paths_to_remove.remove(auto_confirm)
File "/Library/Python/2.7/site-packages/pip-9.0.1-py2.7.egg/pip/req/req_uninstall.py", line 115, in remove
renames(path, new_path)
File "/Library/Python/2.7/site-packages/pip-9.0.1-py2.7.egg/pip/utils/__init__.py", line 267, in renames
shutil.move(old, new)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 302, in move
copy2(src, real_dst)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 131, in copy2
copystat(src, dst)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 103, in copystat
os.chflags(dst, st.st_flags)
OSError: [Errno 1] Operation not permitted: '/var/folders/26/51wbl41d7hg6gh4vs7zlwchh0000gp/T/pip-HFl5IT-uninstall/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/numpy-1.8.0rc1-py2.7.egg-info'
Ive seen this error whenever a installing module needed numpy but already found it so it tried to uninstall it thus resulting in a crash. I have tried "sudo pip install quandl", "pip install quandl", and some more.
Please Help, Thanks!
SOLVED!!!
I tried easy_install and it worked, can't believe that I couldn't find the answer on the internet!!!
I did : "sudo easy_install quandl" And it worked!!!

Permission denied trying to uninstall nose

I have been having a really hard time getting nose to installed properly on my mac. Many people on the site have had this problem in the past and I was following the instructions of past posts. In the terminal is shows that nose is installed and upgraded.
pip install nose
When I tried to uninstall nose I got this back:
Exception:
Traceback (most recent call last): File
"/Library/Python/2.7/site-packages/pip/basecommand.py", line 215, in
main
status = self.run(options, args) File "/Library/Python/2.7/site-packages/pip/commands/uninstall.py", line
76, in run
requirement_set.uninstall(auto_confirm=options.yes) File "/Library/Python/2.7/site-packages/pip/req/req_set.py", line 336, in
uninstall
req.uninstall(auto_confirm=auto_confirm) File "/Library/Python/2.7/site-packages/pip/req/req_install.py", line 742,
in uninstall
paths_to_remove.remove(auto_confirm) File "/Library/Python/2.7/site-packages/pip/req/req_uninstall.py", line
115, in remove
renames(path, new_path) File "/Library/Python/2.7/site-packages/pip/utils/init.py", line 267,
in renames
shutil.move(old, new) File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py",
line 303, in move
os.unlink(src) OSError: [Errno 13] Permission denied: '/Library/Python/2.7/site-packages/nose-1.3.7.dist-info/DESCRIPTION.rst'
What can I do to get nose installed properly. Thank you!
If permission is denied, then you should try uninstalling it with super-user privileges. That is, run sudo pip uninstall nose.

i am getting error while i run pip install pokitdok?

when i run >pip install pokitdok
I got below error
to run >pip install pokitdok what changes i have to do
Exception:
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/basecommand.py", line 232, in main
status = self.run(options, args)
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/commands/install.py", line 347, in run
root=options.root_path,
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/req/req_set.py", line 543, in install
requirement.uninstall(auto_confirm=True)
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/req/req_install.py", line 667, in uninstall
paths_to_remove.remove(auto_confirm)
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/req/req_uninstall.py", line 126, in remove
renames(path, new_path)
File "/usr/local/lib/python2.7/dist-packages/pip-6.0.8-py2.7.egg/pip/utils/__init__.py", line 316, in renames
shutil.move(old, new)
File "/usr/lib/python2.7/shutil.py", line 300, in move
rmtree(src)
File "/usr/lib/python2.7/shutil.py", line 252, in rmtree
onerror(os.remove, fullname, sys.exc_info())
File "/usr/lib/python2.7/shutil.py", line 250, in rmtree
os.remove(fullname)
OSError: [Errno 13] Permission denied: '/usr/lib/python2.7/dist-packages/oauthlib/__init__.py'
As a general rule, you only want to elevate privileges(sudo) if you absolutely have to. One good alternative is to use a Python virtualenv, as described in this this question.
Of course, if you're just tinkering, it's probably not a big deal.
You need to install it as root user, so use sudo:
sudo pip install pokitdok

Categories