I have a question with writing a dataframe format to R.
I have 1000 column X 77 row data. I want to write this dataframe to R data.
When I use function of
r_dataframe = com.convert_to_r_dataframe(df)
it gives me an error like dataframe object has no arttribute type.
When I see the code of com.convert_to_r_dataframe(). it just get the column of dataframe, and get the colunm.dtype.type.
In this moment, the column is dataframe, I think large columns dataframe has inside dataframes?
Any one have some idea to solve this problem?
The data.frame transfer from Python to R could be accomplished with the feather format. Via this link you can find more information.
Quick example.
Export in Python:
import feather
path = 'my_data.feather'
feather.write_dataframe(df, path)
Import in R:
library(feather)
path <- "my_data.feather"
df <- read_feather(path)
In this case you'll have the data in R as a data.frame. You can then decide to write it to an RData file.
save(df, file = 'my_data.RData')
simplest, bestest practical solution is to export in csv
import pandas as pd
dataframe.to_csv('mypath/file.csv')
and then read in R using read.csv
Related
My dataframe has 251 lines and only one column. But I want to split this data into separated columns using pandas, specifically.
The text file that I am using to acquire data looks like this,
But using the following code, it results in:
import pandas as pd
directory = 'A://'
spGlass = 'Glass.txt'
fileAir = os.path.join(directory,spGlass)
dataAir = pd.read_csv(fileAir,skiprows=2)
Question: Is there a way to split these data into different columns as it is presented on text file using Pandas??
I have a CSV file, diseases_matrix_KNN.csv which has excel table.
Now, I would like to store all the numbers from the row like:
Hypothermia = [0,-1,0,0,0,0,0,0,0,0,0,0,0,0]
For some reason, I am unable to find a solution to this. Even though I have looked. Please let me know if I can read this type of data in the chosen form, using Python please.
most common way to work with excel is use Pandas.
Here is example:
import pandas as pd
df = pd.read_excel(filename)
print (df.iloc['Hypothermia']). # gives you such result
I am trying to understand how JSON data which is not parsed/extracted correctly can be converted into a (Pandas) DataFrame.
I am using python (3.7.1) and have tried the usual way of reading the JSON data. Actually, the code works if I use transpose or axis=1 syntax. But using that completely ignores a large number of values or variables in the data and I am 100% sure that the maybe the code is working but is not giving the desired results.
import pandas as pd
import numpy as np
import csv
import json
sourcefile = open(r"C:\Users\jadil\Downloads\chicago-red-light-and-speed-camera-data\socrata_metadata_red-light-camera-violations.json")
json_data = json.load(sourcefile)
#print(json_data)
type(json_data)
dict
## this code works but is not loading/reading complete data
df = pd.DataFrame.from_dict(json_data, orient="index")
df.head(15)
#This is what I am getting for the first 15 rows
df.head(15)
0
createdAt 1407456580
description This dataset reflects the daily volume of viol...
rights [read]
flags [default, restorable, restorePossibleForType]
id spqx-js37
oid 24980316
owner {'type': 'interactive', 'profileImageUrlLarge'...
newBackend False
totalTimesRated 0
attributionLink http://www.cityofchicago.org
hideFromCatalog False
columns [{'description': 'Intersection of the location...
displayType table
indexUpdatedAt 1553164745
rowsUpdatedBy n9j5-zh
As you have seen, Pandas will attempt to create a data frame out of JSON data even if it is not parsed or extracted correctly. If your goal is to understand exactly what Pandas does when presented with a messy JSON file, you can look inside the code for pd.DataFrame.from_dict() to learn more. If your goal is to get the JSON data to convert correctly to a Pandas data frame, you will need to provide more information abut the JSON data, ideally by providing a sample of the data as text in your question. If your data is sufficiently complicated, you might try the json_normalize() function as described here.
I have a messy text file that I need to sort into columns in a dataframe so I
can do the data analysis I need to do. Here is the messy looking file:
Messy text
I can read it in as a csv file, that looks a bit nicer using:
import pandas as pd
data = pd.read_csv('phx_30kV_indepth_0_0_outfile.txt')
print(data)
And this prints out the data aligned, but the issue is that the output is [640 rows x 1 column]. And I need to separate it into multiple columns and manipulate it as a dataframe.
I have tried a number of solutions using StringIO that have worked here before, but nothing seems to be doing the trick.
However, when I do this, there is the issue that the
delim_whitespace=True
Link to docs ^
df = pd.read_csv('phx_30kV_indepth_0_0_outfile.txt', delim_whitespace=True)
Your input file is actually not in CSV format.
As you provided only .png picture, it is even not clear, whether this file
is divided into rows or not.
If not, you have to start from "cutting" the content into individual lines and
read the content from the output file - result of this cutting.
I think, this is the first step, before you can use either read_csv or read_table (of course, with delim_whitespace=True).
So I have a data file, which i must extract specific data from. Using;
x=15 #need a way for code to assess how many lines to skip from given data
maxcol=2000 #need a way to find final row in data
data=numpy.genfromtxt('data.dat.csv',skip_header=x,delimiter=',')
column_one=data[0;max,0]
column_two=data[0:max,1]
this gives me an array for the specific case where there are (x=)15 lines of metadata above the required data and where the number of rows of data is (maxcol=)2000. In what way do I go about changing the code to satisfy any value for x and maxcol?
Use pandas. Its read_csv function does all that you want (I don't include its equivalent of delimiter, sep=',', because comma-delimited is the default):
import pandas as pd
data = pd.read_csv('data.dat.csv', skiprows=x, nrows=maxcol)
If you really want that as a numpy array, you can do this:
data = data.values
But you can probably just leave it as a pandas DataFrame.