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Unable to install Python 3.8.5 using pyenv

I'm trying to install Python 3.8.5 using pyenv on Centos 6 Docker image. I am getting the below error:
Downloading Python-3.6.12.tar.xz...
-> https://www.python.org/ftp/python/3.6.12/Python-3.6.12.tar.xz Installing Python-3.6.12...
BUILD FAILED (CentOS release 6.10 (Final) using python-build
1.2.22-47-g4c302a0)
Inspect or clean up the working tree at
/tmp/python-build.20210131203049.150 Results logged to
/tmp/python-build.20210131203049.150.log
Last 10 log lines: checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes checking if g++ supports
-c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking
dynamic linker characteristics... (cached) GNU/Linux ld.so checking
how to hardcode library paths into programs... immediate checking size
of size_t... 8 checking for C compiler vendor... gcc -pthread -shared
-L/root/.pyenv/versions/3.6.12/lib -L/root/.pyenv/versions/3.6.12/lib -L/root/.pyenv/versions/3.6.12/lib -I/root/.pyenv/versions/3.6.12/include build/temp.linux-x86_64-3.6/tmp/python-build.20210131203049.150/Python-3.6.12/Modules/pyexpat.o
build/temp.linux-x86_64-3.6/tmp/python-build.20210131203049.150/Python-3.6.12/Modules/expat/xmlparse.o
build/temp.linux-x86_64-3.6/tmp/python-build.20210131203049.150/Python-3.6.12/Modules/expat/xmlrole.o
build/temp.linux-x86_64-3.6/tmp/python-build.20210131203049.150/Python-3.6.12/Modules/expat/xmltok.o
-L/root/.pyenv/versions/3.6.12/lib -L/usr/local/lib -o build/lib.linux-x86_64-3.6/pyexpat.cpython-36m-x86_64-linux-gnu.so
/bin/sh: line 9: 8442 Killed CC='gcc -pthread'
LDSHARED='gcc -pthread -shared -L/root/.pyenv/versions/3.6.12/lib
-L/root/.pyenv/versions/3.6.12/lib ' OPT='-DNDEBUG -g -fwrapv -O3 -Wall' _TCLTK_INCLUDES='' _TCLTK_LIBS='' ./python -E ./setup.py $quiet build make: *** [sharedmods] Error 137

Looks like you're missing a dep. Try this:
$ sudo yum install openssl-devel
If that's not enough, several other relevant deps are mentioned on https://joshspicer.com/python37-ssl-issue
Notice that merely having openssl installed
is not sufficient.
You need the -devel form of the package.
It contains essential ingredients, such as *.h header files,
that are necessary for the build to succeed.
Use $ yum list installed to see what you have ATM.
You might find e.g. yum list installed | grep -i openssl convenient.

Error Installing psycopg2 on Amazon Linux

When installing psycopg2 on Amazon Linux using this command: sudo pip-3.4 install psycopg2 I get this output:
gcc -pthread -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -fPIC -DPSYCOPG_DEFAULT_PYDATETIME=1 -DPSYCOPG_VERSION="2.7 (dt dec pq3 ext)" -DPG_VERSION_NUM=90218 -I/usr/include/python3.4m -I. -I/usr/include/pgsql92 -I/usr/include/pgsql92/server -c psycopg/psycopgmodule.c -o build/temp.linux-x86_64-3.4/psycopg/psycopgmodule.o -Wdeclaration-after-statement
In file included from ./psycopg/replication_cursor.h:30:0,
from psycopg/psycopgmodule.c:32:
./psycopg/libpq_support.h:31:32: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘XLogRecPtr’
typedef unsigned PG_INT64_TYPE XLogRecPtr;
^
In file included from psycopg/psycopgmodule.c:32:0:
./psycopg/replication_cursor.h:47:5: error: unknown type name ‘XLogRecPtr’
XLogRecPtr write_lsn; /* LSNs for replication feedback messages */
^
./psycopg/replication_cursor.h:48:5: error: unknown type name ‘XLogRecPtr’
XLogRecPtr flush_lsn;
^
./psycopg/replication_cursor.h:49:5: error: unknown type name ‘XLogRecPtr’
XLogRecPtr apply_lsn;
^
In file included from psycopg/psycopgmodule.c:33:0:
./psycopg/replication_message.h:46:5: error: unknown type name ‘XLogRecPtr’
XLogRecPtr data_start;
^
./psycopg/replication_message.h:47:5: error: unknown type name ‘XLogRecPtr’
XLogRecPtr wal_end;
^
error: command 'gcc' failed with exit status 1
I already have gcc, postgresql-devel, postgresql-libs, and python34-devel installed. Am I missing a package or setting?
Edit: This is on an EMR node.

I have the same problem with EMR, I tried below
sudo yum -y install gcc python-setuptools python-devel postgresql-devel
sudo /usr/bin/pip install --upgrade pip
sudo /usr/local/bin/pip install psycopg2
It works when I'm running it on EMR but doesn't work when EMR is spin up from Pipeline.

If you are trying to install psycopg2 for python3 you must install python3-devel as well.
To find the correct package
yum search python3 | grep devel
In my case it was python36-devel so I did
sudo yum install python36-devel
And then I could install psycopg2 for my python3 virtualenvironment on the machine

If you're looking for psycopg2 for python3 in amazon linux, this is what worked for me:
sudo yum install -y gcc postgresql-devel
sudo curl https://bootstrap.pypa.io/ez_setup.py -o - | sudo python36
sudo pip-3.6 install -U psycopg2

Error installing smpeg [duplicate]

I've been trying to install Pygame for days now, and the only dependency missing is smpeg. I get the following output:
brew install --HEAD smpeg
==> Installing dependencies for smpeg: gobject-introspection, gdk-pixbuf,
==> Installing smpeg dependency: gobject-introspection
==> Building source; bottle blocked by python requirement
==> Downloading http://ftp.gnome.org/pub/GNOME/sources/gobject-introspection/1.4
Already downloaded: /Library/Caches/Homebrew/gobject-introspection-1.40.0.tar.xz
==> ./configure --prefix=/usr/local/Cellar/gobject-introspection/1.40.0
checking for python script directory... ${prefix}/lib/python2.7/site-packages
checking for python extension module directory... ${exec_prefix}/lib/python2.7/sitepackages
checking for headers required to compile python extensions... ./configure: line 14647: /Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/pytho n-config: No such file or directory
not found
configure: error: Python headers not found
I've also tried to brew edit smpeg, adding include.install Dir["*.h"] above the two end at the end of the code, but to no avail.
My brew doctor says:
Warning: Python is installed at /Library/Frameworks/Python.framework
Homebrew only supports building against the System-provided Python or a
brewed Python. In particular, Pythons installed to /Library can interfere
with other software installs.
My brew list says:
autoconf git libgcrypt mpfr sdl_mixer
automake glib libgpg-error pkg-config sdl_ttf
cloog gmp libmpc portmidi tree
cmake gnu-getopt libpng pwgen webp
freetype isl libtiff sdl xz
gettext jpeg libtool sdl_gfx
gfortran libffi mercurial sdl_image
brew --config:
==> Configuration
HOMEBREW_VERSION: 0.9.5
HEAD: 7448fd1532ae1c1709fe2f03ffe0dc188a134b3e
CPU: quad-core 64-bit ivybridge
OS X: 10.9.2-x86_64
Xcode: 5.1.1
CLT: 5.1.0.0.1.1396320587
X11: 2.7.5 => /opt/X11
brew was updated and upgraded
I have Python 2.7.6
Later I've managed to install smpeg.h (and MPEGfilter.h) in Python.framework/Versions/2.7/include/python and now when I run python setup.py install from cd pygame-1.9.1release, I get:
/usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -arch i386 -g -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Ddarwin -I/Library/Frameworks/SDL.framework/Versions/Current/Headers -I/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c src/movie.c -o build/temp.macosx-10.3-fat-2.7/src/movie.o
In file included from src/movie.c:26:
In file included from src/pygame.h:106:
In file included from /Library/Frameworks/SDL.framework/Versions/Current/Headers/SDL.h:30:
In file included from /Library/Frameworks/SDL.framework/Versions/Current/Headers/SDL_main.h:26:
In file included from /Library/Frameworks/SDL.framework/Versions/Current/Headers/SDL_stdinc.h:30:
In file included from /Library/Frameworks/SDL.framework/Versions/Current/Headers/SDL_config.h:34:
In file included from /Library/Frameworks/SDL.framework/Versions/Current/Headers/SDL_config_macosx.h:29:
/usr/include/AvailabilityMacros.h:110:14: warning: Building for Intel with Mac
OS X Deployment Target < 10.4 is invalid. [-W#warnings]
#warning Building for Intel with Mac OS X Deployment Target ...
^
1 warning generated.
/usr/bin/clang -bundle -undefined dynamic_lookup -arch i386 -g build/temp.macosx-10.3-fat-2.7/src/movie.o -ls -lm -lp -le -lg -o build/lib.macosx-10.3-fat-2.7/pygame/movie.so -framework SDL -F/Library/Frameworks/
ld: library not found for -ls
clang: error: linker command failed with exit code 1 (use -v to see invocation)
error: command '/usr/bin/clang' failed with exit status 1

got it. did this: inside 'pygame-1.9.1release', 'cd src, emacs scale_mmx64.c'. there I looked for all occurrences of 'movsxl' and replaced them (two) with with 'movslq'. then 'sudo pip install hg+http://bitbucket.org/pygame/pygame worked'.

#error “SSE2 instruction set not enabled” when installing scikit-bio via pip

I want to install the python library scikit-bio via pip using following command:
sudo pip install scikit-bio
on my system:
uname -a
Linux grassgis 3.2.0-69-generic-pae #103-Ubuntu SMP Tue Sep 2 05:15:53 UTC 2014 i686 i686 i386 GNU/Linux
However this causes an error:
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c skbio/alignment/_ssw/_ssw_wrapper.c -o build/temp.linux-i686-2.7/skbio/alignment/_ssw/_ssw_wrapper.o
In file included from skbio/alignment/_ssw/ssw.h:17:0,
from skbio/alignment/_ssw/_ssw_wrapper.c:355:
/usr/lib/gcc/i686-linux-gnu/4.6/include/emmintrin.h:32:3: error: #error "SSE2 instruction set not enabled"
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1532:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:226:1: warning: ‘_import_umath’ defined but not used [-Wunused-function]
error: command 'gcc' failed with exit status 1
I ran already sudo apt-get update and sudo apt-get upgrade to get the most recent versions of installed software.
My GCC version is:
gcc --version
gcc (Ubuntu/Linaro 4.6.3-1ubuntu5) 4.6.3
How can I successfully install the scikit-bio packages for python?

This problem was previously reported by a user with an i686 machine on the scikit-bio issue tracker. The error occurs while compiling SSW, an external C program that is shipped with scikit-bio. The author of SSW recommended passing -msse2 to the compiler to fix the issue.
A fix was merged into the development branch of scikit-bio to include this flag for i686 machines.
If you are installing a release version of scikit-bio, you can specify this flag via CFLAGS on the command line:
CFLAGS=-msse2 pip install scikit-bio
or:
sudo CFLAGS=-msse2 pip install scikit-bio
Alternatively, scikit-bio's setup.py file can be modified to include '-msse2' in SSW's extra_compile_args.

Cython Install GCC error

Trying to install Cython on a small VPS running Ubuntu Server. Did
sudo apt-get install gcc
and then
python setup.py install
In the Cython directory, but I get this peculiar error.
running install
running build
running build_py
running build_ext
building 'Cython.Plex.Scanners' extension
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.6 -c Cython/Plex/Scanners.c -o build/temp.linux-x86_64-2.6/Cython/Plex/Scanners.o
Cython/Plex/Scanners.c:4:20: error: Python.h: No such file or directory
Cython/Plex/Scanners.c:6:6: error: #error Python headers needed to compile C extensions, please install development version of Python.
error: command 'gcc' failed with exit status 1
Why should I need a 'development version of Python'? Running Python 2.6.5 (r265:79063, Apr 16 2010, 13:57:41). Thanks!

You need the developer version of Python - i.e. the Python header files (Python.h)
sudo apt-get install python-dev

You need the headers included in the development version of Python, i.e. python.h. It should be packaged in Ubuntu as python-dev.