I installed tensorflow and CUDA using the .deb file. I also installed CUDNN. However, when I try to import the library in python, it is giving me this error.
>>> import tensorflow
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python2.7/dist-packages/tensorflow/__init__.py", line 23, in <module>
from tensorflow.python import *
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/__init__.py", line 49, in <module>
from tensorflow.python import pywrap_tensorflow
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/pywrap_tensorflow.py", line 28, in <module>
_pywrap_tensorflow = swig_import_helper()
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python
pywrap_tensorflow.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow', fp, pathname, description)
ImportError: libcudart.so.7.5: cannot open shared object file: No such file or directory
I've added the following lines to my .bashrc file
export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:/usr/local/cuda/lib64"
export CUDA_HOME=/usr/local/cuda
export PATH=$PATH:/usr/local/cuda/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/cuda/lib64
and make sure that you have libcudart.so.7.5.lib inside that path.
Like fabrizioM mentioned, you must have the libcudart.so.7.5.lib inside /usr/local/cuda/lib64. To do that, follow the instructions given by TensorFlow:
tar xvzf cudnn-7.5-linux-x64-v5.1-ga.tgz
sudo cp cuda/include/cudnn.h /usr/local/cuda/include
sudo cp cuda/lib64/libcudnn* /usr/local/cuda/lib64
sudo chmod a+r /usr/local/cuda/include/cudnn.h /usr/local/cuda/lib64/libcudnn*
Related
I am getting headache with tensorflow installations...
I have CUDA 8, CUdnn 6 and UBUNTU 16.04, python 2.7
I want now to install yensorflow. I have followed what they have explained for installation on the website but I have version ismatches of libraries.
As I am using caffe, I do not want to change those versions. So I have to go for older versions of tensorflow it seems.
But I can not find a good way to install it. Every time it is just failuare. I am very tired now.
I go like this:
1- download tensorflow r1.4 from here:
https://github.com/tensorflow/tensorflow/tree/r1.4
2- My 'LD_LIBRARY_PATH' is:
:/usr/local/cuda-8.0/lib64/:/usr/local/cuda/lib64:/home/aa/torch/install/lib:/usr/lib/
3- The I run successfully this:
$ sudo apt-get install python-pip python-dev python-virtualenv # for Python 2.7
4- and this:
$ virtualenv --system-site-packages targetDirectory # for Python 2.7
5- I activate the environment
$ source ~/tensorflow/bin/activate
6- and this
(tensorflow)$ easy_install -U pip
Till here, everything is fine.
7- and when I run this line
pip install --upgrade tensorflow-gpu
It finished successfully with this message:
Successfully installed absl-py-0.1.10 numpy-1.14.1 protobuf-3.5.1 setuptools-38.5.1 six-1.11.0 tensorflow-gpu-1.5.0 tensorflow-tensorboard-1.5.1 werkzeug-0.14.1 wheel-0.30.0
But then I cannot import it in python and this message is given:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/__init__.py", line 24, in <module>
from tensorflow.python import *
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 49, in <module>
from tensorflow.python import pywrap_tensorflow
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 74, in <module>
raise ImportError(msg)
ImportError: Traceback (most recent call last):
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 58, in <module>
from tensorflow.python.pywrap_tensorflow_internal import *
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 28, in <module>
_pywrap_tensorflow_internal = swig_import_helper()
File "/home/aa/tensorflow/local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow_internal', fp, pathname, description)
ImportError: libcublas.so.9.0: cannot open shared object file: No such file or directory
Failed to load the native TensorFlow runtime.
See https://www.tensorflow.org/install/install_sources#common_installation_problems
for some common reasons and solutions. Include the entire stack trace above this error message when asking for help.
I think I should go for older versions.
I did install older versions
but then when I test installation in python I see this messages:
>>> import tensorflow
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/__init__.py", line 24, in <module>
from tensorflow.python import *
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 52, in <module>
from tensorflow.core.framework.graph_pb2 import *
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/core/framework/graph_pb2.py", line 16, in <module>
from tensorflow.core.framework import node_def_pb2 as tensorflow_dot_core_dot_framework_dot_node__def__pb2
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/core/framework/node_def_pb2.py", line 16, in <module>
from tensorflow.core.framework import attr_value_pb2 as tensorflow_dot_core_dot_framework_dot_attr__value__pb2
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/core/framework/attr_value_pb2.py", line 16, in <module>
from tensorflow.core.framework import tensor_pb2 as tensorflow_dot_core_dot_framework_dot_tensor__pb2
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/core/framework/tensor_pb2.py", line 16, in <module>
from tensorflow.core.framework import resource_handle_pb2 as tensorflow_dot_core_dot_framework_dot_resource__handle__pb2
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/core/framework/resource_handle_pb2.py", line 22, in <module>
serialized_pb=_b('\n/tensorflow/core/framework/resource_handle.proto\x12\ntensorflow\"r\n\x13ResourceHandleProto\x12\x0e\n\x06\x64\x65vice\x18\x01 \x01(\t\x12\x11\n\tcontainer\x18\x02 \x01(\t\x12\x0c\n\x04name\x18\x03 \x01(\t\x12\x11\n\thash_code\x18\x04 \x01(\x04\x12\x17\n\x0fmaybe_type_name\x18\x05 \x01(\tB/\n\x18org.tensorflow.frameworkB\x0eResourceHandleP\x01\xf8\x01\x01\x62\x06proto3')
TypeError: __init__() got an unexpected keyword argument 'syntax'
>>> import tensorflow
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/__init__.py", line 24, in <module>
from tensorflow.python import *
File "/home/aa/.local/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 49, in <module>
from tensorflow.python import pywrap_tensorflow
ImportError: cannot import name pywrap_tensorflow
You should be able to install earlier versions of tensorflow using
pip install tensorflow==1.3 where 1.3 is the version number. You can pick the version of your choice.
you can find .whl file of tensorflow in here https://pypi.python.org/pypi/tensorflow/1.4.0 and install it using pip.
hope you looking tensorflow 1.4.0 version in case if you want older version change url https://pypi.python.org/pypi/tensorflow/1.x.0(x= version you want)
'The problem is solved.
I had "/usr/lib/python2.7/dist-packages" in my PYTHONPATH.
So there was a version mismatch between protobufs and it was solved by typing 'unset PYTHONPATH' before starting to import tensorflow.
I'm trying to install SyntaxNet on Ubuntu, I followed the Ubuntu 16.10+ binary installation instruction here. When I ran the last command:
python -c 'import dragnn.python.load_dragnn_cc_impl, syntaxnet.load_parser_ops'
I get this long line of error message below:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/usr/local/lib/python2.7/dist-packages/dragnn/python/load_dragnn_cc_impl.py", line 19, in <module>
import tensorflow as tf
File "/usr/local/lib/python2.7/dist-packages/tensorflow/__init__.py", line 24, in <module>
from tensorflow.python import *
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/__init__.py", line 51, in <module>
from tensorflow.python import pywrap_tensorflow
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/pywrap_tensorflow.py", line 52, in <module>
raise ImportError(msg)
ImportError: Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/pywrap_tensorflow.py", line 41, in <module>
from tensorflow.python.pywrap_tensorflow_internal import *
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 28, in <module>
_pywrap_tensorflow_internal = swig_import_helper()
File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow_internal', fp, pathname, description)
ImportError: /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.22' not found (required by /usr/local/lib/python2.7/dist-packages/tensorflow/python/_pywrap_tensorflow_internal.so)
Failed to load the native TensorFlow runtime.
See https://www.tensorflow.org/install/install_sources#common_installation_problems
for some common reasons and solutions. Include the entire stack trace
above this error message when asking for help.
I checked the common installation problems page but it appears there is no fix for this there yet. Does anyone have a similar problem installing SyntaxNet? I would really appreciate your help.
You need to install latest libstdc++6.
check version
strings /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | grep GLIBCXX
add repo
sudo add-apt-repository ppa:ubuntu-toolchain-r/test
install
sudo apt-get update
sudo apt-get dist-upgrade # I used this command, I guess that the following command should also work.
sudo apt-get install libstdc++6
I followed this: How to fix: /usr/lib/libstdc++.so.6: version `GLIBCXX_3.4.15' not found.
I have recently attempted to install tensorboard via pip as detailed in the README.md. The installation was deemed successful however when I try to run tensorboard after the installation, I keep on receiving an import/undefined symbol error as seen below.
Traceback (most recent call last):
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/tensorboard/tensorboard.py", line 32, in <module>
from tensorflow.python.summary import event_file_inspector as efi
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/summary/event_file_inspector.py", line 122, in <module>
from tensorflow.python.platform import gfile
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/platform/gfile.py", line 22, in <module>
from tensorflow.python.lib.io.file_io import copy as Copy
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/lib/io/file_io.py", line 27, in <module>
from tensorflow.python import pywrap_tensorflow
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/pywrap_tensorflow.py", line 28, in <module>
_pywrap_tensorflow = swig_import_helper()
File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/pywrap_tensorflow.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow', fp, pathname, description)
ImportError: /usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/_pywrap_tensorflow.so: undefined symbol: PyBytes_AsStringAndSize
Have I missed something in the installation process?
What can I do to fix this?
Thanks!
above error is reported because Tensorboard is installed using pip3(python 3) and TF env is set to python2.7.
use pip2 install tensorboard
now tensorboard and tf env both set to python2
I am trying to use tensorflow on a cluster with outdated GLIC library.
I have tried following the steps explained in this page: Error while importing Tensorflow in python2.7 in Ubuntu 12.04. 'GLIBC_2.17 not found'
It works when I run it with a normal python command (which python = /anaconda2/bin/python)
I need to run my program using the qsub command (script submission) in the cluster but I get the following error:
Traceback (most recent call last):
File "/users/k15/helloada.py", line 2, in <module>
import tensorflow as tf
File "/users/k15/anaconda2/lib/python2.7/site-packages/tensorflow/__init__.py", line 23, in <module>
from tensorflow.python import *
File "/users/k15/anaconda2/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 48, in <module>
from tensorflow.python import pywrap_tensorflow
File "/users/k15/anaconda2/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 28, in <module>
_pywrap_tensorflow = swig_import_helper()
File "/users/k15/anaconda2/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow', fp, pathname, description)
ImportError: /lib64/libc.so.6: version `GLIBC_2.17' not found (required by /users/k15/anaconda2/lib/python2.7/site-packages/tensorflow/python/_pywrap_tensorflow.so)
The problem is that I cannot use the following line:
LD_LIBRARY_PATH="$HOME/my_libc_env/lib/x86_64-linux-gnu/:$HOME/my_libc_env/usr/lib64/" $HOME/my_libc_env/lib/x86_64-linux-gnu/ld-2.17.so `which python`
with the qsub command. (I can make tensorflow work normally by running python with the above line.)
The qsub uses a script file with the following structure:
#!/bin/sh
INPUT=/users/k15/file.py
EXEC=home/k15/anaconda2/bin/python
$EXEC $INPUT
I am at a loss on how to make this work, any help would be greatly appreciated.
[xx_xx#xxxx ~]$ python multiply.py
Traceback (most recent call last):
File "multiply.py", line 2, in <module>
import tensorflow as tf
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/__init__.py", line 4, in <module>
from tensorflow.python import *
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 22, in <module>
from tensorflow.python.client.client_lib import *
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/python/client/client_lib.py", line 35, in <module>
from tensorflow.python.client.session import InteractiveSession
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/python/client/session.py", line 11, in <module>
from tensorflow.python import pywrap_tensorflow as tf_session
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 28, in <module>
_pywrap_tensorflow = swig_import_helper()
File "/home/luohao/.usr/bin/python2.7.10/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 24, in swig_import_helper
_mod = imp.load_module('_pywrap_tensorflow', fp, pathname, description)
ImportError: libcudart.so.7.0: cannot open shared object file: No such file or directory
When I execute python command, a "ImportError" error occurs.Some solved it by adding "export LD_LIBRARY_PATH=/usr/local/cuda-5.5/lib:/usr/local/cuda-5.5/lib64" in the /etc/profile.I try it but do no effect.I find the "libcudart.so.7.0" in /usr/share/man/man7/libcudart.so.7 by executing the whereis command and have no idea what should I do next to solve it.
This error is being raised because the loader cannot find version 7.0 of the CUDA runtime on your system. TensorFlow requires CUDA 7.0.
From the path in your question (/usr/local/cuda-5.5/...) it looks like you have CUDA 5.5 installed. The solution is to upgrade your CUDA runtime to version 7.0, which is available from NVIDIA here.