I want to install a Python package within a script in PyScripter.
import pip
package = 'xlsxwriter'
pip.main(['install', package])
Following error occurs:
Collecting xlsxwriter
Downloading XlsxWriter-0.9.3-py2.py3-none-any.whl (136kB)
Exception:
Traceback (most recent call last):
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\basecommand.py", line 215, in main
status = self.run(options, args)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\commands\install.py", line 299, in run
requirement_set.prepare_files(finder)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\req\req_set.py", line 370, in prepare_files
ignore_dependencies=self.ignore_dependencies))
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\req\req_set.py", line 587, in _prepare_file
session=self.session, hashes=hashes)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\download.py", line 810, in unpack_url
hashes=hashes
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\download.py", line 649, in unpack_http_url
hashes)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\download.py", line 871, in _download_http_url
_download_url(resp, link, content_file, hashes)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\download.py", line 577, in _download_url
progress_indicator = DownloadProgressBar(max=total_length).iter
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\utils\ui.py", line 158, in __init__
super(WindowsMixin, self).__init__(*args, **kwargs)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\utils\ui.py", line 82, in __init__
super(InterruptibleMixin, self).__init__(*args, **kwargs)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\utils\ui.py", line 118, in __init__
super(DownloadProgressMixin, self).__init__(*args, **kwargs)
File "C:\Python27\ArcGIS10.4\lib\site-packages\pip\_vendor\progress\helpers.py", line 58, in __init__
if self.file.isatty() and self.hide_cursor:
File "<string>", line 523, in __getattr__
File "C:\Program Files (x86)\PyScripter\Lib\rpyc.zip\rpyc\core\netref.py", line 150, in __getattr__
return syncreq(self, consts.HANDLE_GETATTR, name)
File "C:\Program Files (x86)\PyScripter\Lib\rpyc.zip\rpyc\core\netref.py", line 71, in syncreq
return conn.sync_request(handler, oid, *args)
File "C:\Program Files (x86)\PyScripter\Lib\rpyc.zip\rpyc\core\protocol.py", line 434, in sync_request
raise obj
AttributeError: DebugOutput instance has no attribute 'isatty'
Why does this error occur und how to fix it? The same code works well when using the Python interpreter directly, but not with PyScripter for some reason.
Thanks a lot for your help.
Related
I'm using the AWS CDK to run lambda functions locally. I have followed a couple of tutorials on setting this up but I appear to be getting issues when invoking the function with SAM. The typical error I encounter is below:
Invoking handler.handle (python3.9)
PypassLambdaLayer0643FC6D is a local Layer in the template
Image was not found.
Building image...Traceback (most recent call last):
File "runpy.py", line 194, in _run_module_as_main
File "runpy.py", line 87, in _run_code
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\__main__.py", line 12, in <module>
cli(prog_name="sam")
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 829, in __call__
return self.main(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 782, in main
rv = self.invoke(ctx)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 1066, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 610, in invoke
return callback(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\decorators.py", line 73, in new_func
return ctx.invoke(f, obj, *args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\click\core.py", line 610, in invoke
return callback(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\lib\telemetry\metric.py", line 166, in wrapped
raise exception # pylint: disable=raising-bad-type
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\lib\telemetry\metric.py", line 124, in wrapped
return_value = func(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\lib\utils\version_checker.py", line 41, in wrapped
actual_result = func(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\cli\main.py", line 87, in wrapper
return func(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\commands\local\invoke\cli.py", line 85, in cli
do_cli(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\commands\local\invoke\cli.py", line 182, in do_cli
context.local_lambda_runner.invoke(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\commands\local\lib\local_lambda.py", line 137, in invoke
self.local_runtime.invoke(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\lib\telemetry\metric.py", line 230, in wrapped_func
return_value = func(*args, **kwargs)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\lambdafn\runtime.py", line 177, in invoke
container = self.create(function_config, debug_context, container_host, container_host_interface)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\lambdafn\runtime.py", line 73, in create
container = LambdaContainer(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\docker\lambda_container.py", line 93, in __init__
image = LambdaContainer._get_image(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\docker\lambda_container.py", line 236, in _get_image
return lambda_image.build(runtime, packagetype, image, layers, architecture, function_name=function_name)
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\docker\lambda_image.py", line 163, in build
self._build_image(
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\local\docker\lambda_image.py", line 261, in _build_image
with create_tarball(tar_paths, tar_filter=tar_filter) as tarballfile:
File "contextlib.py", line 113, in __enter__
File "C:\Program Files\Amazon\AWSSAMCLI\runtime\lib\site-packages\samcli\lib\utils\tar.py", line 29, in create_tarball archive.add(path_on_system, arcname=path_in_tarball, filter=tar_filter)
File "tarfile.py", line 1977, in add
File "tarfile.py", line 1977, in add
File "tarfile.py", line 1977, in add
[Previous line repeated 1 more time]
File "tarfile.py", line 1955, in add
File "tarfile.py", line 1834, in gettarinfo
FileNotFoundError: [WinError 3] The system cannot find the path specified: 'C:\\Users\\LeeBarrett\\OneDrive - LumiraDx Group Ltd\\Documents\\pypass_dev\\2022\\pypass_connect_lambda\\cdk.out\\asset.60e64357ce064cf62274b8d1a8976ceb2903f31abd576090b450010d30b4ac7a\\python\\numpy\\.libs\\libopenblas.FB5AE2TYXYH2IJRDKGDGQ3XBKLKTF43H.gfortran-win_amd64.dll'
I've had multiple errors similar to that above but sometimes the file that is (apparently) missing is different. It looks like an issue with building the image rather than the stack code itself but I'm unsure and couldn't find any other similar issues.
The code I am using in the Stack class object is below:
pypass_lambda_layer = _lambda.LayerVersion(self, "PypassLambdaLayer", code=_lambda.Code.from_asset("lambda/layers"), compatible_runtimes=[_lambda.Runtime.PYTHON_3_9])
my_lambda = _lambda.Function(self, "Pypasshandler", runtime=_lambda.Runtime.PYTHON_3_9, code=_lambda.Code.from_asset("lambda/code"), handler="handler.handle", layers=[pypass_lambda_layer])
Tutorials I tried to follow:
https://dev.to/upupkenchoong/how-to-provision-lambda-and-lambda-layer-with-cdk-2ff4
https://medium.com/geekculture/deploying-aws-lambda-layers-with-python-8b15e24bdad2
The layers folder referenced in the LayerVersion function contains another folder called python which has pandas installed in it.
\lambda
\layers
\python
\code
handler.py
I'm on a windows machine and I have the cdk packages installed in conda virtual environment.
Any help would be greatly appreciated.
Thanks
I am aiming to analyse geodata in python but fail on step 1: the installation. I'm relatively new to python and used to installing packages with pip. Now, for geopandas, it looks like I'm supposed to use conda install. Sadly, I get an error.
What I did: I downloaded the most recent anconda software and typed 'conda install geopandas' in the anaconda prompt (anaconda3).
Reading similar questions online I saw some questions solved by updating anaconda, but since I downloaded the version on the homepage I would expect it to be up to date. Also, I didn't find any entries with error code similar to mine.
From what I gather from the response, anaconda didn't even manage to find the package (first line of the below code). However, I am not very experienced in the analysis of error code.
Any help would be greatly appreciated!
The error-code
Collecting package metadata (current_repodata.json): failed
WARNING conda.exceptions:print_unexpected_error_report(1213): KeyError('pkgs_dirs')
Traceback (most recent call last):
File "D:\Programs\Anaconda3\lib\site-packages\conda\exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 83, in do_call
return getattr(module, func_name)(args, parser)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\main_install.py", line 20, in execute
install(args, parser, 'install')
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\install.py", line 261, in install
unlink_link_transaction = solver.solve_for_transaction(
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 114, in solve_for_transaction
unlink_precs, link_precs = self.solve_for_diff(update_modifier, deps_modifier,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 157, in solve_for_diff
final_precs = self.solve_final_state(update_modifier, deps_modifier, prune, ignore_pinned,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 262, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "D:\Programs\Anaconda3\lib\site-packages\conda\common\io.py", line 88, in decorated
return f(*args, **kwds)
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 425, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 1020, in _prepare
reduced_index = get_reduced_index(self.prefix, self.channels,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\index.py", line 276, in get_reduced_index
new_records = SubdirData.query_all(spec, channels=channels, subdirs=subdirs,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\subdir_data.py", line 98, in query_all
create_cache_dir()
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\subdir_data.py", line 674, in create_cache_dir
cache_dir = join(PackageCacheData.first_writable().pkgs_dir, 'cache')
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\package_cache_data.py", line 152, in first_writable
pkgs_dirs = context.pkgs_dirs
File "D:\Programs\Anaconda3\lib\site-packages\conda\base\context.py", line 520, in pkgs_dirs
fixed_dirs += user_data_dir(APP_NAME, APP_NAME),
File "D:\Programs\Anaconda3\lib\site-packages\conda\_vendor\appdirs.py", line 67, in user_data_dir
path = os.path.join(_get_win_folder(const), appauthor, appname)
File "D:\Programs\Anaconda3\lib\site-packages\conda\_vendor\appdirs.py", line 284, in _get_win_folder_with_pywin32
from win32com.shell import shellcon, shell
ImportError: DLL load failed while importing shell: The specified module could not be found.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "D:\Programs\Anaconda3\lib\site-packages\conda\exceptions.py", line 1211, in print_unexpected_error_report
message_builder.append(get_main_info_str(error_report['conda_info']))
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\main_info.py", line 238, in get_main_info_str
info_dict['_' + key] = ('\n' + 26 * ' ').join(info_dict[key])
KeyError: 'pkgs_dirs'
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "D:\Programs\Anaconda3\lib\site-packages\conda\exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 83, in do_call
return getattr(module, func_name)(args, parser)
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\main_install.py", line 20, in execute
install(args, parser, 'install')
File "D:\Programs\Anaconda3\lib\site-packages\conda\cli\install.py", line 261, in install
unlink_link_transaction = solver.solve_for_transaction(
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 114, in solve_for_transaction
unlink_precs, link_precs = self.solve_for_diff(update_modifier, deps_modifier,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 157, in solve_for_diff
final_precs = self.solve_final_state(update_modifier, deps_modifier, prune, ignore_pinned,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 262, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "D:\Programs\Anaconda3\lib\site-packages\conda\common\io.py", line 88, in decorated
return f(*args, **kwds)
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 425, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\solve.py", line 1020, in _prepare
reduced_index = get_reduced_index(self.prefix, self.channels,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\index.py", line 276, in get_reduced_index
new_records = SubdirData.query_all(spec, channels=channels, subdirs=subdirs,
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\subdir_data.py", line 98, in query_all
create_cache_dir()
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\subdir_data.py", line 674, in create_cache_dir
cache_dir = join(PackageCacheData.first_writable().pkgs_dir, 'cache')
File "D:\Programs\Anaconda3\lib\site-packages\conda\core\package_cache_data.py", line 152, in first_writable
pkgs_dirs = context.pkgs_dirs
File "D:\Programs\Anaconda3\lib\site-packages\conda\base\context.py", line 520, in pkgs_dirs
fixed_dirs += user_data_dir(APP_NAME, APP_NAME),
File "D:\Programs\Anaconda3\lib\site-packages\conda\_vendor\appdirs.py", line 67, in user_data_dir
path = os.path.join(_get_win_folder(const), appauthor, appname)
File "D:\Programs\Anaconda3\lib\site-packages\conda\_vendor\appdirs.py", line 284, in _get_win_folder_with_pywin32
from win32com.shell import shellcon, shell
ImportError: DLL load failed while importing shell: The specified module could not be found.
`$ D:\Programs\Anaconda3\Scripts\conda-script.py install geopandas`
environment variables:
conda info could not be constructed.
KeyError('pkgs_dirs')
An unexpected error has occurred. Conda has prepared the above report.
I had the same issue back then, and I followed the instructions on this link.
https://medium.com/analytics-vidhya/fastest-way-to-install-geopandas-in-jupyter-notebook-on-windows-8f734e11fa2b
Basically what this does is create a new environment in your anaconda navigator where I could get geopandas working normally.
After upgrading to Python 3.9, i'm getting these errors when running mkdocs serve I'm not a developer. I use MKDocs to build a documentation site and I wanted to upgrade the software, as a result I had to upgrade Python, pip, mkdocs and mkdocs-material..
INFO - Cleaning site directory
Traceback (most recent call last):
File "/usr/local/bin/mkdocs", line 8, in <module>
sys.exit(cli())
File "/usr/local/lib/python3.9/site-packages/click/core.py", line 829, in __call__
return self.main(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.9/site-packages/click/core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/local/lib/python3.9/site-packages/click/core.py", line 1066, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/local/lib/python3.9/site-packages/click/core.py", line 610, in invoke
return callback(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/mkdocs/__main__.py", line 133, in serve_command
serve.serve(
File "/usr/local/lib/python3.9/site-packages/mkdocs/commands/serve.py", line 141, in serve
config = builder()
File "/usr/local/lib/python3.9/site-packages/mkdocs/commands/serve.py", line 136, in builder
build(config, live_server=live_server, dirty=dirty)
File "/usr/local/lib/python3.9/site-packages/mkdocs/commands/build.py", line 263, in build
nav = get_navigation(files, config)
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 102, in get_navigation
items = _data_to_navigation(nav_config, files, config)
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 157, in _data_to_navigation
return [
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 158, in <listcomp>
_data_to_navigation(item, files, config)[0]
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 150, in _data_to_navigation
return [
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 153, in <listcomp>
Section(title=key, children=_data_to_navigation(value, files, config))
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/nav.py", line 164, in _data_to_navigation
file = files.get_file_from_path(path)
File "/usr/local/lib/python3.9/site-packages/mkdocs/structure/files.py", line 31, in get_file_from_path
return self.src_paths.get(os.path.normpath(path))
File "/usr/local/Cellar/python#3.9/3.9.0_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/posixpath.py", line 336, in normpath
path = os.fspath(path)
TypeError: expected str, bytes or os.PathLike object, not NoneType```
Try this.
pip install -U mkdocs
I was getting same error. After updated mkdocs it resolved.
I am in the process of building a docker container that will run my automation tests. When I attempt to run the command below [this works locally and in jenkins] I get the following error:
root#645ed3930434:/test_dir# pytest test_* -m smoke
Traceback (most recent call last):
File "/usr/local/bin/pytest", line 11, in <module>
sys.exit(main())
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 49, in main
config = _prepareconfig(args, plugins)
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 168, in _prepareconfig
pluginmanager=pluginmanager, args=args)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 745, in __call__
return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 339, in _hookexec
return self._inner_hookexec(hook, methods, kwargs)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 334, in <lambda>
_MultiCall(methods, kwargs, hook.spec_opts).execute()
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 613, in execute
return _wrapped_call(hook_impl.function(*args), self.execute)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 250, in _wrapped_call
wrap_controller.send(call_outcome)
File "/usr/local/lib/python3.5/dist-packages/_pytest/helpconfig.py", line 68, in pytest_cmdline_parse
config = outcome.get_result()
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 279, in get_result
raise ex[1].with_traceback(ex[2])
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 265, in __init__
self.result = func()
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 614, in execute
res = hook_impl.function(*args)
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 957, in pytest_cmdline_parse
self.parse(args)
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 1121, in parse
self._preparse(args, addopts=addopts)
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 1084, in _preparse
self.pluginmanager.load_setuptools_entrypoints('pytest11')
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 516, in load_setuptools_entrypoints
self.register(plugin, name=ep.name)
File "/usr/local/lib/python3.5/dist-packages/_pytest/config.py", line 264, in register
ret = super(PytestPluginManager, self).register(plugin, name)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 371, in register
hook._maybe_apply_history(hookimpl)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 768, in _maybe_apply_history
res = self._hookexec(self, [method], kwargs)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 339, in _hookexec
return self._inner_hookexec(hook, methods, kwargs)
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 334, in <lambda>
_MultiCall(methods, kwargs, hook.spec_opts).execute()
File "/usr/local/lib/python3.5/dist-packages/_pytest/vendored_packages/pluggy.py", line 614, in execute
res = hook_impl.function(*args)
File "/usr/local/lib/python3.5/dist-packages/pytest_cloud/plugin.py", line 76, in pytest_addoption
os.environ['USER'],
File "/usr/lib/python3.5/os.py", line 725, in __getitem__
raise KeyError(key) from None
KeyError: 'USER'
I am new to docker, so I do not understand what is causing this error.
I am starting with a ubuntu as my base [this also happens when using a https://hub.docker.com/_/python/ as my base]
for reference requirements.txt includes the following:
apipkg==1.4
certifi==2017.11.5
chardet==3.0.4
execnet==1.5.0
idna==2.6
parameterized==0.6.1
psutil==5.4.1
py==1.5.2
pytest==3.2.5
pytest-cloud==2.0.0
pytest-forked==0.2
pytest-xdist==1.20.1
requests==2.18.4
six==1.11.0
timeout-decorator==0.4.0
urllib3==1.22
I have installed Python 3.5.2 in the container
The 'USER' environment variable seems not to defined within your image. Define it externally, or make your code resilient to its absence:
In your code, use os.getenv('USER', backup_user_name) instead of os.environ['USER']
In your code, use getpass instead of relying on your environment to get the current user.
import getpass
print getpass.getuser()
In docker run, you could add -e USER=$(whoami) or something of that sort
In docker-compose, you could add USER: some_user_name under the environ setting for that service.
I'm in Win7 64, Anaconda Python installation, pip installed PyDEM.
I'm getting an error when calling .calc_slopes_directions() on a DEMProcessor instance (see below).
I'm aware of this question; that seems not to be the same problem I have.
This LoweringError: slc0.8 seems to be related to Numba.
This is the code I enter and the error I get:
from pydem.dem_processing import DEMProcessor
os.chdir(r'D:\my_path')
a_tile = r'31an2_clipped_wgs84.tif'
dem_proc = DEMProcessor(a_tile)
mag, aspect = dem_proc.calc_slopes_directions()
starting slope/direction calculation for chunk 1 [0:516, 0:516]
Traceback (most recent call last):
File "<ipython-input-13-6dc0db5771d2>", line 1, in <module>
mag, aspect = dem_proc.calc_slopes_directions()
File "C:\Program Files\Anaconda2\lib\site-packages\pydem\dem_processing.py", line 853, in calc_slopes_directions
self.dY[te:be-1])
File "C:\Program Files\Anaconda2\lib\site-packages\pydem\dem_processing.py", line 879, in _slopes_directions
return self._tarboton_slopes_directions(data, dX, dY)
File "C:\Program Files\Anaconda2\lib\site-packages\pydem\dem_processing.py", line 890, in _tarboton_slopes_directions
self.facets, self.ang_adj)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\dispatcher.py", line 285, in _compile_for_args
return self.compile(tuple(argtypes))
File "C:\Program Files\Anaconda2\lib\site-packages\numba\dispatcher.py", line 531, in compile
cres = self._compiler.compile(args, return_type)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\dispatcher.py", line 80, in compile
flags=flags, locals=self.locals)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 725, in compile_extra
return pipeline.compile_extra(func)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 369, in compile_extra
return self.compile_bytecode(bc, func_attr=self.func_attr)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 378, in compile_bytecode
return self._compile_bytecode()
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 690, in _compile_bytecode
return self._compile_core()
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 677, in _compile_core
res = pm.run(self.status)
File "C:\Program Files\Anaconda2\lib\site-packages\numba\compiler.py", line 257, in run
raise patched_exception
LoweringError: slc0.8