Storing queryset after fetching it once - python

I am new to django and web development.
I am building a website with a considerable size of database.
Large amount of data should be shown in many pages, and a lot of this data is repeated. I mean I need to show the same data in many pages.
Is it a good idea to make a query to the database asking for the data in every GET request? it takes many seconds to get the data every time I refresh the page or request another page that has the same data shown.
Is there a way to fetch the data once and store it somewhere and just display it in every page, and only refetch it when some updates are being done.
I thought about the session but I found that it is limited to 5MB which is small for my data.
Any suggestions?
Thank you.

Django's cache - as mentionned by Leistungsabfall - can help, but like most cache systems it has some drawbacks too if you use it naively for this kind of problems (long queries/computations): when the cache expires, the next request will have to recompute the whole thing - which might take some times durring which every new request will trigger a recomputation... Also, proper cache invalidation can be really tricky.
Actually there's no one-size-fits-all answer to your question, the right solution is often a mix of different solutions (code optimisation, caching, denormalisation etc), based on your actual data, how often they change, how much visitors you have, how critical it is to have up-to-date data etc, but the very first steps would be to
check the code fetching the data and find out if there are possible optimisations at this level using QuerySet features (.select_related() / prefetch_related(), values() and/or values_list(), annotations etc) to avoid issues like the "n+1 queries" problem, fetching whole records and building whole model instances when you only need a single field's value, doing computations at the Python level when they could be done at the database level etc
check your db schema's indexes - well used indexes can vastly improve performances, badly used ones can vastly degrade performances...
and of course use the right tools (db query logging, Python's profiler etc) to make sure you identify the real issues.

Related

Notion API quickly delete and repopulate entire DB

Background
I'm creating a Notion DB that will contain data about different analyzers my team uses (analyzer name, location, last time the analyzer sent data, etc.). Since I'm using live data I need to have a way to quickly update the data of all analyzers in the notion db.
I'm currently using a python script to get the analyzers data and upload it to the Notion DB. Currently I read each row, get it's ID that I use to update the row's data - but this is too slow: it takes more than 30 seconds to update 100 rows.
The Question
I'd like to know if there's a way to quickly update the data of many rows (maybe in one big bulk operation). The goal is perhaps 100 row updates per second (instead of 30 seconds).
There are multiple things one could do here - sadly none of it will improve the updates drastically. Currently there is no way to update multiple rows, or to be more precise pages. I am not sure what "read each row" refers to, but you can retrieve multiple pages of a database at once - up to 100. If you are retrieving them one by one, this could be updated.
Secondly, I'd like to know how often the analyzers change and if, will they be altered by the Python script or updated in Notion? If this does not happen too often, you might be able to cache the page_ids and retrieve the ids not every time you update. Sadly the last_edited_time of the database does not reflect any addition or removal of it's children, so simply checking this is not an option.
The third and last way to improve performance is multi-threading. You can send multiple requests at the same time as the amount of requests is usually the bottleneck.
I know none of these will really help you, but sadly no efficient method to update multiple pages exists.
There is also the rate limit of 3 requests per second, which is enforced by Notion to ensure fair performance for all users. If you send more requests, you will start receiving responses with an HTTP 429 code. Your integration should be written in such a way that this response will be respected and should prevent any requests to be sent before the time indicated in the indicated number of seconds as per this page on the notion developer API guidelines.

Flask website backend structure guidance assistance?

I have a basic personal project website that I am looking to learn some web dev fundamentals with and database (SQL) fundamentals as well (If SQL is even the right technology to use??).
I have the basic skeleton up and running but as I am new to this, I want to make sure I am doing it in the most efficient and "correct" way possible.
Currently the site has a main index (landing) page and from there the user can select one of a few subpages. For the sake of understanding, each of these sub pages represents a different surf break and they each display relevant info about that particular break i.e. wave height, wind, tide.
As I have already been able to successfully scrape this data, my main questions revolve around how would I go about inserting this data into a database for future use (historical graphs, trends)? How would I ensure data is added to this database in a continuous manner (once/day)? How would I use data that was scraped from an earlier time, say at noon, to be displayed/used at 12:05 PM rather than scraping it again?
Any other tips, guidance, or resources you can point me to are much appreciated.
This kind of data is called time series. There are specialized database engines for time series, but with a not-extreme volume of observations - (timestamp, wave heigh, wind, tide, which break it is) tuples - a SQL database will be perfectly fine.
Try to model your data as a table in Postgres or MySQL. Start by making a table and manually inserting some fake data in a GUI client for your database. When it looks right, you have your schema. The corresponding CREATE TABLE statement is your DDL. You should be able to write SELECT queries against your table that yield the data you want to show on your webapp. If these queries are awkward, it's a sign that your schema needs revision. Save your DDL. It's (sort of) part of your source code. I imagine two tables: a listing of surf breaks, and a listing of observations. Each row in the listing of observations would reference the listing of surf breaks. If you're on a Mac, Sequel Pro is a decent tool for playing around with a MySQL database, and playing around is probably the best way to learn to use one.
Next, try to insert data to the table from a Python script. Starting with fake data is fine, but mold your Python script to read from your upstream source (the result of scraping) and insert into the table. What does your scraping code output? Is it a function you can call? A CSV you can read? That'll dictate how this script works.
It'll help if this import script is idempotent: you can run it multiple times and it won't make a mess by inserting duplicate rows. It'll also help if this is incremental: once your dataset grows large, it will be very expensive to recompute the whole thing. Try to deal with importing a specific interval at a time. A command-line tool is fine. You can specify the interval as a command-line argument, or figure out out from the current time.
The general problem here, loading data from one system into another on a regular schedule, is called ETL. You have a very simple case of it, and can use very simple tools, but if you want to read about it, that's what it's called. If instead you could get a continuous stream of observations - say, straight from the sensors - you would have a streaming ingestion problem.
You can use the Linux subsystem cron to make this script run on a schedule. You'll want to know whether it ran successfully - this opens a whole other can of worms about monitoring and alerting. There are various open-source systems that will let you emit metrics from your programs, basically a "hey, this happened" tick, see these metrics plotted on graphs, and ask to be emailed/texted/paged if something is happening too frequently or too infrequently. (These systems are, incidentally, one of the main applications of time-series databases). Don't get bogged down with this upfront, but keep it in mind. Statsd, Grafana, and Prometheus are some names to get you started Googling in this direction. You could also simply have your script send an email on success or failure, but people tend to start ignoring such emails.
You'll have written some functions to interact with your database engine. Extract these in a Python module. This forms the basis of your Data Access Layer. Reuse it in your Flask application. This will be easiest if you keep all this stuff in the same Git repository. You can use your chosen database engine's Python client directly, or you can use an abstraction layer like SQLAlchemy. This decision is controversial and people will have opinions, but just pick one. Whatever database API you pick, please learn what a SQL injection attack is and how to use user-supplied data in queries without opening yourself up to SQL injection. Your database API's documentation should cover the latter.
The / page of your Flask application will be based on a SQL query like SELECT * FROM surf_breaks. Render a link to the break-specific page for each one.
You'll have another page like /breaks/n where n identifies a surf break (an integer that increments as you insert surf break rows is customary). This page will be based on a query like SELECT * FROM observations WHERE surf_break_id = n. In each case, you'll call functions in your Data Access Layer for a list of rows, and then in a template, iterate through those rows and render some HTML. There are various Javascript and Python graphing libraries you can feed this list of rows into and get graphs out of (client side or server side). If you're interested in something like a week-over-week change, you should be able to express that in one SQL query and get that dataset directly from the database engine.
For performance, try not to get in a situation where more than one SQL query happens during a page load. By default, you'll be doing some unnecessary work by going back to the database and recomputing the page every time someone requests it. If this becomes a problem, you can add a reverse proxy cache in front of your Flask app. In your case this is easy, since nothing users do to the app cause its content to change. Simply invalidate the cache when you import new data.

Persistent object with Django?

So I have a site that on a per-user basis, and it is expected to query a very large database, and flip through the results. Due to the size of the number of entries returned, I run the query once (which takes some time...), store the result in a global, and let folks iterate through the results (or download them) as they want.
Of course, this isn't scalable, as the globals are shared across sessions. What is the correct way to do this in Django? I looked at session management, but I always ran into the "xyz is not serializeable on json" issue. Do I look into how I do this correctly using sessions, or is there another preferred way to do this?
If the user is flipping through the results, you probably don't want to pull back and render any more than you have to. Most SQL dialects have TOP and LIMIT clauses that will let you pull back a limited range of results, as long as your data is ordered consistently. Django's Pagination classes are a nice abstraction of this on top of Django Model classes: https://docs.djangoproject.com/en/dev/topics/pagination/
I would be careful of storing large amounts of data in user sessions, as it won't scale as your number of users grows, and user sessions can stay around for a while after the user has left the site. If you're set on this option, make sure you read about clearing the expired sessions. Django doesn't do it for you:
https://docs.djangoproject.com/en/1.7/topics/http/sessions/#clearing-the-session-store

Efficient storage of and access to web pages with Python

So like many people I want a way to download, index/extract information and store web pages efficiently. My first thought is to use MySQL and simply shove the pages in which would let me use FULLTEXT searches which would let me do ad hoc queries easily (in case I want to see if something exists and extract it/etc.). But of course performance wise I have some concerns especially with large objects/pages and high volumes of data. So that leads me to look at things like CouchDB/search engines/etc. So to summarize, my basic requirements are:
It must be Python compatible (libraries/etc.)
Store meta data (URL, time retrieved, any GET/POST stuff I sent), response code, etc. of the page I requested.
Store a copy of the original web page as sent by the server (might be content, might be 404 search page, etc.).
Extract information from the web page and store it in a database.
Have the ability to do ad hoc queries on the existing corpus of original web pages (for example a new type of information I want to extract, or to see how many of the pages have the string "fizzbuzz" or whatever in them.
And of course it must be open source/Linux compatible, I have no interest in something I can't modify or fiddle with.
So I'm thinking several broad options are:
Toss everything into MySQL, use FULLTEXT, go nuts, shard the contact if needed.
Toss meta data into MySQL, store the data on the file system or something like CouchDB, write some custom search stuff.
Toss meta data into MySQL, store the data on a file system with a web server (maybe /YYYY/MM/DD/HH/MM/SS/URL/), make sure there is no default index.html/etc specified (directory index each directory in other words) and use some search engine like Lucene or Sphinx index the content and use that to search. Biggest downside I see here is the inefficiency of repeatedly crawling the site.
Other solutions?
When answering please include links to any technologies you mention and if possible what programming languages it has libraries for (i.e. if it's Scala only or whatever it's probably not that useful since this is a Python project). If this question has already been asked (I'm sure it must have been) please let me know (I searched, no luck).
Why do you think solution (3), the Sphinx-based one, requires "repeatedly crawling the site"? Sphinx can accept and index many different data sources, including MySQL and PostgreSQL "natively" (there are contributed add-ons for other DBs such as Firebird) -- you can keep your HTML docs as columns in your DB if you like (modern PostgreSQL versions should have no trouble with that, and I imagine that MySQL's wouldn't either), just use Sphinx superior indexing and full-text search (including stemming &c). Your metadata all comes from headers, after all (plus the HTTP request body if you want to track requests in which you POSTed data, but not the HTTP response body at any rate).
One important practical consideration: I would recommend standardizing on UTF-8 -- html will come to you in all sorts of weird encodings, but there's no need to get crazy supporting that at search time -- just transcode every text page to UTF-8 upon arrival (from whatever funky encoding it came in), before storing and indexing it, and live happily ever after.
Maybe you could special-case non-textual responses to keep those in files (I can imagine that devoting gigabytes in the DB to storing e.g. videos which can't be body-indexed anyway might not be a good use of resources).
And BTW, Sphinx does come with Python bindings, as you request.
You may be trying to achieve too much with the storage of the html (and supporting files). It seems you wish this repository would both
allow to display a particular page as it was in its original site
provide indexing for locating pages relevant to a particular search criteria
The html underlying a web page once looked a bit akin to a self-standing document, but the pages crawled off the net nowadays are much messier: javascript, ajax snippets, advertisement sections, image blocks etc.
This reality may cause you to rethink the one storage for all html approach. (And also the parsing / pre-processing of the material crawled, but that's another story...)
On the other hand, the distinction between metadata and the true text content associated with the page doesn't need to be so marked. By "true text content", I mean [possibly partially marked-up] text from the web pages that is otherwise free of all other "Web 2.0 noise") Many search engines, including Solr (since you mentioned Lucene) now allow mixing the two genres, in the form of semi-structured data. For operational purposes (eg to task the crawlers etc.), you may keep a relational store with management related metadata, but the idea is that for search purposes, fielded and free-text info can coexist nicely (at the cost of pre-processing much of the input data).
It sounds to me like you need a content management system. Check out Plone. If that's not what you want maybe a web framework, like Grok, BFG, Django, Turbogears, or anything on this list. If that isn't good either, then I don't know what you are asking. :-)

Attribute Cache in Django - What's the point?

I was just looking over EveryBlock's source code and I noticed this code in the alerts/models.py code:
def _get_user(self):
if not hasattr(self, '_user_cache'):
from ebpub.accounts.models import User
try:
self._user_cache = User.objects.get(id=self.user_id)
except User.DoesNotExist:
self._user_cache = None
return self._user_cache
user = property(_get_user)
I've noticed this pattern around a bunch, but I don't quite understand the use. Is the whole idea to make sure that when accessing the FK on self (self = alert object), that you only grab the user object once from the db? Why wouldn't you just rely upon the db caching amd django's ForeignKey() field? I noticed that the model definition only holds the user id and not a foreign key field:
class EmailAlert(models.Model):
user_id = models.IntegerField()
...
Any insights would be appreciated.
I don't know why this is an IntegerField; it looks like it definitely should be a ForeignKey(User) field--you lose things like select_related() here and other things because of that, too.
As to the caching, many databases don't cache results--they (or rather, the OS) will cache the data on disk needed to get the result, so looking it up a second time should be faster than the first, but it'll still take work.
It also still takes a database round-trip to look it up. In my experience, with Django, doing an item lookup can take around 0.5 to 1ms, for an SQL command to a local Postgresql server plus sometimes nontrivial overhead of QuerySet. 1ms is a lot if you don't need it--do that a few times and you can turn a 30ms request into a 35ms request.
If your SQL server isn't local and you actually have network round-trips to deal with, the numbers get bigger.
Finally, people generally expect accessing a property to be fast; when they're complex enough to cause SQL queries, caching the result is generally a good idea.
Although databases do cache things internally, there's still an overhead in going back to the db every time you want to check the value of a related field - setting up the query within Django, the network latency in connecting to the db and returning the data over the network, instantiating the object in Django, etc. If you know the data hasn't changed in the meantime - and within the context of a single web request you probably don't care if it has - it makes much more sense to get the data once and cache it, rather than querying it every single time.
One of the applications I work on has an extremely complex home page containing a huge amount of data. Previously it was carrying out over 400 db queries to render. I've refactored it now so it 'only' uses 80, using very similar techniques to the one you've posted, and you'd better believe that it gives a massive performance boost.

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