I trying to explore Menpo and Menpofit with PyCharm IDE. I have installed required packages but I have some issue:
from .fastpwa import CLookupPWA;
ImportError: cannot import name 'CLookupPWA'
from .normals import compute_normals;
ImportError: No module named 'menpo.shape.mesh.normals'
So how I can run Menpo and Menpofit with PyCharm?
How did you install the required packages? With the conda instructions, or via pip?
The error you are seeing there is because CLookupPWA and compute_normals are compiled Python extensions that need to be built before the package can be loaded. The easiest way to do this is to use the make command in the Menpo top level, which runs python setup.py build_ext --inplace.
If you are on Windows, things start to get pretty tricky, because you need to be able to compile the code properly. Take a look at the instructions here which try to explain how to properly set up Visual Studio 2008.
Related
I need to use the sksparse.chomod package however my pycharm does not let me install it as it can't seem to find it.
I found the sksparse package on github and downloaded it but I do not know how to add a package downloaded from the internet into a conda environment. So, my first question would be can you download a package from github and add it to your conda environment, and how do you do this?
As I did not know how to do the above I instead saved the package within my project and thought I could simply import sksparse.cholmod. However, the line in my code that says import sksparse.cholmod as sks has no errors with it, so I assumed that meant this was ok, but when I try to run my file I get this error:
import sksparse.cholmod as sks
ModuleNotFoundError: No module named 'sksparse.cholmod'
If I have downloaded the package into my project why can't it be found, yet there are no errors when importing?
The cholmod file is a pyx file which I've been told should not be a problem.
Please could anyone help, I am reasonably new to python and I am looking for a straight forward solution that won't be time consuming.
It was an issue with windows, I was able to fix this using the instructions on this link
https://github.com/EmJay276/scikit-sparse
We must follow these steps precisely:
(This was tested with a Anaconda 3 installation and Python 3.7)
Install these requirements in order:
'''
conda install -c conda-forge numpy - tested with v1.19.1
conda install -c anaconda scipy - tested with v1.5.0
conda install -c conda-forge cython - tested with v0.29.21
conda install -c conda-forge suitesparse - tested with v5.4.0
'''
Download Microsoft Build Tools for C++ from https://visualstudio.microsoft.com/de/visual-cpp-build-tools/ (tested with 2019, should work with 2015 or newer)
Install Visual Studio Build Tools
Choose Workloads
Check "C++ Buildtools"
Keep standard settings
Run ''' pip install git+https://github.com/EmJay276/scikit-sparse '''
Test ''' from sksparse.cholmod import cholesky '''
Use all the versions stated for numpy etc, however with scipy I installed the latest version and it worked fine.
I'm running python 3.6 via anaconda 3, using Visual Studio Code.
I followed instructions like these (Interactive Brokers API install) and downloaded the package to a local directory of mine say: c:\dev\pyib, so now the code is in c:\dev\pyib\IbPy-master
I open that directory in command line and run
python setup.py install
All runs ok.
But then my program, which is in c:\dev\pyib says Module not found. (In my case ibapi). The linter is also showing red.
There is no other python installed on this pc.
Where did the package install to? and how do I check that? What will I find where the package installed itself to that shows me its there?
Or do I have to use a trial-and-error with the linter and sys.path.append()? (I tried that with the directory where the files are downloaded to - to no avail)
I'm trying to set up the PYTHONPATH using the "env" in launch.json from Visual Studio Code, as shown in this unaccepted answer.
Current sys.path:
'c:\\dev\\pyIb',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\python36.zip',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\DLLs',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib\\site-
packages',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib\\site-packages\\Babel-2.5.0-py3.6.egg',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib\\site-packages\\win32',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib\\site-packages\\win32\\lib',
'C:\\Users\\user\\AppData\\Local\\Continuum\\anaconda3\\lib\\site-packages\\Pythonwin'
I deleted the ib directory and re-ran the install. The last line says: Writing C:\Users\user\AppData\Local\Continuum\anaconda3\Lib\site-packages\IbPy2-0.8.0-py3.6.egg-info So is the location of the egg-info the location of my undetected module? The actual folder in the site-packages is called ib.
Or could my problems be because of a difference in Lib vs. lib with the lowercase in the sys.path and the uppercase in the actual directory?
But the real question here is still: HOW DO I KNOW WHERE the package was installed what should I search for?
This answer is specific for anaconda3 Python and packages installed using python setup.py install (which is actually using distutils)
Take a look at anaconda3\Lib\site-packages you should see a directory for the package you installed.
The way to know for sure where your package is, is by doing a pip list then trying to pip uninstall and re-install again using the python setup.py install: Here are the detailed instructions:
When uninstalling, pip will tell you it cannot because it was done via distutils.
You'll get a message like this:
DEPRECATION: Uninstalling a distutils installed project (ibpy2) has been deprecated and will be removed in a future version.
This is due to the fact that uninstalling a distutils project will only partially uninstall the project.
You'll be prompted to continue anyway. If you choose No, then you can find the directory in
C:\Users\<yourusername>\AppData\Local\Continuum\anaconda3\Lib\site-packages
Thanks to Emanuel Mtali for pointing me in the right direction
Some more information:
The problem I had was due to a stupid mistake of mine. I was running setup of a different (but related) package not used anymore. IbPy2 instead of TwsAPI. I was supposed to run the setup.py of the package installed via the latest version of the MSI from IB, and NOT the IbPy2 package. :-(
I am trying to build a recommender system with Python. However, I can't proceed since I get an import error of Sklearn everytime.
I get this error:
"ImportError: DLL load failed: Can't find module."
How do i fix this? (The last sentence in the error is in Dutch btw)
A screenshot of my error is below.
By the way: I get the same import error for Seaborn
Windows 10 + Visual Studio Code - "CMD + SHIFT + P" from within visual studio code and search for "Select Interpreter" clicking on this will show a list of available python interpreters and versions installed on your system that are detected by visual studio code and your currently selected environment. (Visual Studio Code usually incorrectly defaults to 32 bit interpreter)
Ensure you have the correct python environment (where you have the required libraries & "packages" installed)
This should fix your import issue if you have the libraries installed. Use the appropriate cmd line tool to install packages. If you are using Anaconda - use Conda Install or use pip etc...
Scikit-learn uses numpy and scipy. Those modules are using C and Fortran code that needs to be compiled. Nonetheless, Windows cannot compile them right away.
I would recommend you to download Anaconda and install scikit-learn like this. (You may need to add conda to path)
Another method is to download precompiled binary from this page. Then run:
pip uninstall scikit-learn
pip install <numpy-wheel>
pip install <scipy-wheel>
pip install <scikit-wheel>
I went to http://nipy.org/dipy/installation.html and install nibabel, then I when I wanted to install dipy, there where 2 problems:
Wheel was not built
and vcvarshall.bat not found.
What I did ?
Install Setuptools in site-pakcages
download Setuptools-34.3.1-py2.py3-none-any.whl (md5) and save in site-packages
I also try
python setup.py install --compiler=mingw32ç
and
If you get an error saying unable to find vcvarsall.bat then you need to create a file called pydistutils.cfg in notepad and give it the contents
[build]
compiler=mingw32
But setup.py de system it did not find, and I still have vcvarshall.bat not found.
what I need to do?
I am using, Windows 7, Python 3.5.1 and Anaconda 2.5.0 (64 bit)
You will almost certainly find it easier to install third-party packages if you adopt virtual environments. When done correctly you will then not need admin privileges to install packages into virtualenvs. The HitchHikers' Guide to Python contains more information about this.
The vcvarsall.bat is, I believe, a part of the Visual Studio (the Express version is available at no cost) environment. It's required when you are trying to build a compiled Python extension as described in this article. I'm not sure how that will play with mingw.
So, I installed via ANACONDA but , when I go to python, and I want to import dipy it says: No modle named dipy
Solved ! Well I had python 3.5 and dipy has some issues with that version, so I installed Anaconda with python 2.7 , installed visual c++9 and follow the steps on the web !
I downloaded http://pytools.codeplex.com/ (Python Tools for Visual Studio) so that I could write Python in Visual Studio.
The problem is when I try to use the most basic package "numpy" like so:
import numpy
It says "No module named 'numpy'."
How can I use NumPy and SciPy in Visual Studio?
Note: I am using Canopy Express on another machine which works perfectly; however, I don't want to install it on this machine since I already have Visual Studio installed.
I added the Python 3.3 environment to my Python "solution" by right-clicking Python environments and clicking add an environment. But, after right-clicking my environment and clicking install Python package, I typed in "numpy" and got this error when trying to install it:
...
creating build
creating build\src.win32-3.3
creating build\src.win32-3.3\numpy
creating build\src.win32-3.3\numpy\distutils
building library "npymath" sources
No module named 'numpy.distutils.msvccompiler' in numpy.distutils; trying from distutils
error: Unable to find vcvarsall.bat
----------------------------------------
Cleaning up...
Command python setup.py egg_info failed with error code 1 in c:\users\dom\appdata\local\temp\pip_build_Dom\numpy
Storing complete log in C:\Users\Dom\pip\pip.log
'numpy' failed to install. Exit code: 1
How can I install NumPy?
In Visual Studio 2013 Community Edition with a Python 2.7 environment, the following worked for me:
Open the Python Environments menu in Solution Explorer, and click on "Install Python Package..."
Then write "numpy":
Two solutions worked for me:
Going directly to my Python folder and installing the packages using pip.
Creating a virtual environment in my project and installing packages from within Visual Studio.
Consider using a more feature-rich Windows distribution of Python, like Anaconda. It comes with a boatload of packages included into the installer. This is quite handy for those who are new to Python, especially when they are using Windows.
Edit:
As of 2020, I would suggest using the python.org distribution of Python. Compiler issues on ms-windows have finally been fixed, so a lot of projects now provide binary packages (wheels) for ms-windows. Among others numpy, pandas, matplotlib, pillow, Cython and PyNaCl.
Note that wheel names ending in:
win_amd64.whl are for 64-bit versions of ms-windows, and
win32.whl are for 32-bit.
I actually ran into the same set of problems when trying to use Visual Studio for Python.
I managed to get things to work at the end - please see Using Visual Studio 2013 for Python (3.4) with NumPy and SciPy on Windows for details. Essentially you can either use the installer (if one is available) or use pip to do the installation.
Make sure C++ Common Tools are installed in Visual Studio:
See under Extra in the Visual Studio (Extra-Python-Interactive Window).
It has the ability to switch the interactive console through a different platform/Python version (32-bit, 64-bit, Debug, and Anaconda (which has the NumPy package)).
From PTVS Installation:
2. Installing packages individually
Here are some recommended packages. Generally you want to install packages using pip or through the interface in Visual Studio (which uses pip), as this will ensure that you get the latest version that will work with your version of Python, as well as any dependencies.
Some packages have complex dependencies and need to be downloaded manually, either from the project's website or from Christoph Gohlke's package collection.
I installed numpy and scipy from these links, and it works perfectly with Visual Studio.
numpy http://sourceforge.net/projects/numpy/files/NumPy/
scipy http://sourceforge.net/projects/scipy/files/scipy/
Matplotlib http://matplotlib.org/downloads.html
Pandas http://pandas.pydata.org/getpandas.html
Well, if anyone still has problem than what worked for me is:
C:/Users/DELL/AppData/Local/Programs/Python/Python39/python.exe -m pip install numpy
where the first part is simply the path of python.