I'm trying update the latest opencv formula (as of writing, this formula installs opencv 2.4.7) to build the latest version of opencv (2.4.8).
The first thing I did was brew edit opencv, and change the url to 'https://github.com/Itseez/opencv/archive/2.4.8.tar.gz' and update the checksum. I anticipated that I might have to deal with some built issues, but the problem I see seems to occur while the formula is being run.
Specifically, when I run brew upgrade opencv (or unlink and run brew install opencv), I get the following message:
==> Downloading https://github.com/Itseez/opencv/archive/2.4.8.tar.gz
Already downloaded: /Library/Caches/Homebrew/opencv-2.4.8.tar.gz
==> Patching
patching file cmake/OpenCVFindOpenNI.cmake
Warning: Formula#python is deprecated and will go away shortly.
Error: undefined method `incdir' for #<PythonDependency: "python" []>
Please report this bug:
https://github.com/Homebrew/homebrew/wiki/troubleshooting
/usr/local/Library/Formula/opencv.rb:49:in `install'
/usr/local/Library/Homebrew/build.rb:165:in `install'
/usr/local/Library/Homebrew/formula.rb:272:in `brew'
/usr/local/Library/Homebrew/formula.rb:617:in `stage'
/usr/local/Library/Homebrew/resource.rb:63:in `unpack'
/usr/local/Library/Homebrew/extend/fileutils.rb:21:in `mktemp'
/usr/local/Library/Homebrew/resource.rb:60:in `unpack'
/usr/local/Library/Homebrew/resource.rb:53:in `stage'
/usr/local/Library/Homebrew/formula.rb:615:in `stage'
/usr/local/Library/Homebrew/formula.rb:267:in `brew'
/usr/local/Library/Homebrew/build.rb:144:in `install'
/usr/local/Library/Homebrew/build.rb:45:in `main'
/usr/local/Library/Homebrew/build.rb:12
/usr/local/Library/Formula/opencv.rb:80
Python doesn't seem to get loaded. I'm also confused by the deprecation warning; everything I've found suggests that python formula is the one I should be using. Judging by this link the depends_on :python dependency seems like it should work (and it obviously did when I tried with the previous 2.4.7.1 formula).
For reference, here are my environment variables:
Apple_PubSub_Socket_Render=/tmp/launch-Ygtqzn/Render
CMD_DURATION=20.7s
COMMAND_MODE=unix2003
DISPLAY=/tmp/launch-a4CGwS/org.x:0
GEM_HOME=/Users/myname/.rvm/gems/ruby-1.9.3-p194
GEM_PATH=/Users/myname/.rvm/gems/ruby-1.9.3-p194:/Users/myname/.rvm/gems/ruby-1.9.3-p194#global
GREP_COLOR=97;45
GREP_OPTIONS=--color=auto
HOME=/Users/myname
LANG=en_CA.UTF-8
LOGNAME=myname
PATH=/usr/local/bin:/Users/myname/.rvm/gems/ruby-1.9.3-p194/bin:/Users/myname/.rvm/gems/ruby-1.9.3-p194#global/bin:/Users/myname/.rvm/rubies/ruby-1.9.3-p194/bin:/Users/myname/.rvm/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/opt/local/bin:/usr/local/git/bin:/Users/myname/.rvm/bin:/usr/local/heroku/bin
PKG_CONFIG_PATH=/usr/local/lib/pkgconfig:/usr/lib/pkgconfig:/usr/X11/lib/pkgconfig
PWD=/Users/myname/projects/forks/ruby-opencv
SHELL=/usr/local/bin/fish
SHLVL=1
SSH_AUTH_SOCK=/tmp/launch-lvn79S/Listeners
TERM=xterm-color
TERM_PROGRAM=Apple_Terminal
TERM_PROGRAM_VERSION=273.1
TMPDIR=/var/folders/pv/pvvR8qgvGOCfd5dza+ZbVU+++TI/-Tmp-/
USER=myname
__CF_USER_TEXT_ENCODING=0x1F5:0:0
__fish_bin_dir=/usr/local/Cellar/fish/2.0.0/bin
__fish_datadir=/usr/local/Cellar/fish/2.0.0/share/fish
__fish_help_dir=/usr/local/Cellar/fish/2.0.0/share/doc/fish
__fish_sysconfdir=/usr/local/Cellar/fish/2.0.0/etc/fish
rvm_bin_path=/Users/myname/.rvm/bin
rvm_path=/Users/myname/.rvm
rvm_prefix=/Users/myname
rvm_version=1.25.3:master
And python (homebrewed) version
python --version #=>Python 2.7.6
brew doctor output gives me a warning about a passenger config file (which shouldn't influence the building of opencv) and a warning that opencv is unlinked (I unlinked it to try running brew install opencv)
Thanks in advance for the help.
I had the same error. I don't understand why "incdir" or other variables are not defined correctly in the formula file. But I solved this error by editing the opencv formula file as follows, (setting each path directly)
(around 50th lines)
DPYTHON_INCLUDE_DIR=/usr/local/Cellar/python/2.7.6/Frameworks/Python.framework/Versions/2.7/include/python2.7
DPYTHON_LIBRARY=/usr/local/Cellar/python/2.7.6/Frameworks/Python.framework/Versions/2.7/lib/libpython2.7.dylib
DPYTHON_EXECUTABLE=/usr/local/bin/python
I worked around this issue by rolling back to an earlier homebrew version, then installing opencv, and then going back to the current version.
See this gist for detailed instructions: https://gist.github.com/frederikhermans/8561382
Related
When I use a plugin that requires python, it can't find it and barfs.
The places that seem to being searched are:
Using -version I see both:
+python/dyn
+python3/dyn
However :echo has("python3") returns 0.
I'm not sure if this is compile time config, or runtime-configurable via .vimrc.
I'm not a python developer, and the few times I've ventured into that world were in the middle of the python2/python3 mess that turned me off completely. I've played around enough to have configured pyenv it seems, and get
╰─$ which python
/Users/benlieb/.pyenv/shims/python
╰─$ python --version
Python 3.10.3
Can anyone help shed light on what to do to get python3 findable/usable in my vim?
Update:
Following #romainl's suggestion below I set in my .vimrc
set pythonthreedll=/Users/benlieb/.pyenv/shims/python
But getting the following error:
+python/dyn and +python3/dyn are described here: :help python-dynamic.
By default, :help 'pythonthreedll' points to:
/opt/homebrew/Frameworks/Python.framework/Versions/3.10/Python
because MacVim is built against that version. The message in your screenshot says that there is nothing at that path. In order to have a working Python 3 interface, you can either:
install Python 3.10 via homebrew,
or point pythonthreedll to a valid path.
For example, I don't use Homebrew so the default value is useless to me, but I use MacPorts so this is my pythonthreedll:
set pythonthreedll=/opt/local/Library/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib
After some time, I found the following works, thought it was not a fun path of discovery.
let &pythonthreedll = trim(system("pyenv which python"))
I updated my R to the most recent version 4.0 and tried to install the 'umx' package which worked fine when I had the 3.6.3 version. I then changed my R back to 3.6.3 version and the 'umx' package still won't install. I get the below error:
installing source package ‘kableExtra’ ...
** package ‘kableExtra’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/Library/Frameworks/R.framework/Versions/3.6/Resources/library/gdtools/libs/gdtools.so':
dlopen(/Library/Frameworks/R.framework/Versions/3.6/Resources/library/gdtools/libs/gdtools.so, 6): Library not loaded: /opt/X11/lib/libcairo.2.dylib
Referenced from: /Library/Frameworks/R.framework/Versions/3.6/Resources/library/gdtools/libs/gdtools.so
Reason: image not found
Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘kableExtra’
removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/kableExtra’
Warning in install.packages :
installation of package ‘kableExtra’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/88/d4_sv_l174vcbkn5f8r6ytjc0000gn/T/RtmpSb59yk/downloaded_packages’
Not sure why this is as everything was fine before I updated my R, and my expectation was that it would be fine again when going back to my original R version but this is not the case. Any help with this would be greatly appreciated!
Thanks,
Rionagh
I was getting the same error for the last 2 days and then I wrote an issue in GitHub to the person who made this package. One of people answered my question by suggesting to update the version of R. Same like you, I was using 3.6.2 version of R and then I followed his suggestion, I updated my R version to 4.0.4 He also suggested me to upload "systemfonts" package before I upload the kableExtra by writing this code install.packages('systemfonts', dependencies = TRUE). Yet I think it was because of the old version that ı was using. So the bottomline is, if you update your R to 4.0.4, and run these 2 codes;
install.packages('systemfonts', dependencies = TRUE)
install.packages('kableExtra', repos='https://cran.ma.imperial.ac.uk/')
it is just going to work I guess. I mean it worked for me.
I am getting this error when trying to run a classic python code written by x-colleagues.
Can u anyone help me out with solving this issue. I have googled throughly and couldn't find any solution.
Python version : 2.4.3
ImportError: /usr/lib/python2.4/lib-dynload/pyexpat.so: symbol XML_SetHashSalt, version EXPAT_1_95_8_RH not defined in file libexpat.so.0 with link time reference
I got the same problem and the root cause for me is that i built libexpat myself from source but pyexpat.so seems to depand on RH customized libexpat version.
So check your dependencies with:
ldd /usr/lib/python2.4/lib-dynload/pyexpat.so
Then check your libexpat.so file. If possible, you can try to re-install the rpm of expat-devel.x86_64 (for 64 bit).
yum install expat-devel.x86_64
Hi I'm having trouble installing and using the Mercurial ChartExtension
When I installed it as per instructions
First you need to install the extension; type this in your shell:
python ./setup.py install
Blockquote
I then modified my mercurial.ini file as follows
[extensions]
chart=/path/to/chart.py
Blockquote
Then tried running Hg Chart command and got the following error
Can anyone help me get this extension working. I know there's the Hg ActivityExtension as well, but i have not had much luck with that either Problem installing Mercurial Activity extension
A layman's guide to what steps i need to follow would be of immense help
Based on the changelog, the Chart extension has not been updated since late 2008. It would probably work if you tried using it with a version of Mercurial released around that same time (Mercurial v1.1.2 was released on Dec. 30, 2008).
The latest version of Mercurial is now v1.9.2. The API has changed (probably quite a bit) since v1.1.2. If the extension has not been modified to keep up with the changes to the API, then it will fail in ways similar to the error you found. In this case, the number of arguments for the walkchangerevs method has changed.
Updating the extension could be a large task...there is no way to know without inspecting the code. You could try to contact the author (#Ry4an) and ask for help. You could also try to modify the extension yourself.
We've installed mercurial 1.4.1 and python 2.6.2 on a solaris 8 box. Now some hg commands work as expected, others fail.
I was able to initialize a repository (hg init) and add a file (hg add) but the committing (hg commit) leads to an error message:
abort: could not import module found!
I need a hint where to look - I'm not a python expert, is this missing found module part of the python distribution or does it belong to mercurial? Any idea how to fix it?
Edit
Thanks for your comments - hg debuginstall runs fine, just reports one problem - I didn't set a username in any of the config files. Can't believe that this causes the actual problems...
Edit
--traceback was a good hint!!
Here's the last line (can't copy&paste):
ImportError: ld.so.1: hg: fatal: relocation error:
file:/usr/local/lib/python2.6/lib-dynload/zlib.so:
symbol inflateCopy: referenced symbol not found
The zlib.so library is present was installed with either the python or mercurial package.
Looks like I'm not the only one: here's the same problem with python 2.5 on solaris 10
You need to install the zlib library for your system (libz.so).
Check your LD_LIBRARY_PATH settings.
If it is pulling libz from an odd place you will need to fix it so that it is pulling from /pkg/local/lib first
I was seeing this:
ldd /pkg/local/lib/python2.7/lib-dynload/zlib.so
libz.so => /import/wgs/lib/libz.so
But now its working for me.