Get PyDev to recognize self-made modules for import - python

PyDev screenshot
Hi,
the title is quite self-explanatory.
I just imported my entire python program autosub in a PyDev project (confusingly also called autosub). Scripts in the subdirectory autosub/autosub (this is getting ridiculous) often import functions from scripts in the same subdirectory.
But the program is actually ran by executing AutoSub.py in the top-directory (note, there is also a AutoSub.py in subdir but this is not the one I execute from the CL)
I suppose because of this, PyDev gives an error on this. Is there an (easy) way to get PyDev to recognize this and make the errors go away?
Cheers!

From your screenshot, the problem seems to be that the actual package (the folder autosub whith has the __init__.py) is inside a folder which does not have an __init__.py itself
I.e.: you have: autosub/autosub/autosub, the intermediary one: autosub/autosub should not exist -- so that you have autosub <- project in the pythonpath containing a dir autosub which must have the __init__.py.

Related

Python script works in PyCharm but not in terminal

I'm currently trying to import one of my modules from a different folder.
Like this...
from Assets.resources.libs.pout import Printer, ForeColor, BackColor
This import method works completely fine in PyCharm, however, when i try to launch the file in cmd or IDLE, i get this error.
ModuleNotFoundError: No module named 'Assets'
This is my file structure from main.py to pout.py:
- Assets
- main.py
- resources
- libs
- pout.py
Any clue about how i could fix this ?
Any help is appreciated !
Edit: The original answer was based on the assumption that the script you're running is within the folder structure given, which a re-read tells me may not be true. The general solution is to do
sys.path.append('path_to_Assets')
but read below for more detail.
Original answer
The paths that modules can be loaded from will differ between the two methods of running the script.
If you add
import sys
print(sys.path)
to the top of your script before the imports you should be able to see the difference.
When you run it yourself the first entry will be the location of the script itself, followed by various system/environment paths. When you run it in PyCharm you will see the same first entry, followed by an entry for the top level of the project. This is how it finds the modules when run from PyCharm. This behaviour is controlled by the "Add content roots to PYTHONPATH" option in the run configuration.
Adding this path programmatically in a way that will work in all situations isn't trivial because, unlike PyCharm, your script doesn't have a concept of where the top level should be. BUT if you know you'll be running the script from the top level, i.e. your working directory will be the folder containing Assets and you're running something like python Assets/main.py then you can do
sys.path.append(os.path.abspath('.'))
and that will add the correct folder to the path.
Appending sys path didn't work for me on windows, hence here is the solution that worked for me:
Add an empty __init__.py file to each directory
i.e. in Assets, resources, libs.
Then try importing with only the base package names.
Worked for me!

ModuleNotFoundError when running script from Terminal

I have the following folder structure:
app
__init__.py
utils
__init__.py
transform.py
products
__init__.py
fish.py
In fish.py I'm importing transform as following: import utils.transform.
When I'm running fish.py from Pycharm, it works perfectly fine. However when I am running fish.py from the Terminal, I am getting error ModuleNotFoundError: No module named 'utils'.
Command I use in Terminal: from app folder python products/fish.py.
I've already looked into the solutions suggested here: Importing files from different folder, adding a path to the application folder into the sys.path helps. However I am wondering if there is any other way of making it work without adding two lines of code into the fish.py. It's because I have many scripts in the /products directory, and do not want to add 2 lines of code into each of them.
I looked into some open source projects, and I saw many examples of importing modules from a parallel folder without adding anything into sys.path, e.g. here:
https://github.com/jakubroztocil/httpie/blob/master/httpie/plugins/builtin.py#L5
How to make it work for my project in the same way?
You probably want to run python -m products.fish. The difference between that and python products/fish.py is that the former is roughly equivalent to doing import products.fish in the shell (but with __name__ set to __main__), while the latter does not have awareness of its place in a package hierarchy.
This expands on #Mad Physicist's answer.
First, assuming app is itself a package (since you added __init__.py to it) and utils and products are its subpackages, you should change the import to import app.utils.transform, and run Python from the root directory (the parent of app). The rest of this answer assumes you've done this. (If it wasn't your intention making app the root package, tell me in a comment.)
The problem is that you're running app.products.fish as if it were a script, i.e. by giving the full path of the file to the python command:
python app/products/fish.py
This makes Python think this fish.py file is a standalone script that isn't part of any package. As defined in the docs (see here, under <script>), this means that Python will search for modules in the same directory as the script, i.e. app/products/:
If the script name refers directly to a Python file, the directory
containing that file is added to the start of sys.path, and the file
is executed as the __main__ module.
But of course, the app folder is not in app/products/, so it will throw an error if you try to import app or any subpackage (e.g. app.utils).
The correct way to start a script that is part of a package is to use the -m (module) switch (reference), which takes a module path as an argument and executes that module as a script (but keeping the current working directory as a module search path):
If this option is given, [...] the current directory
will be added to the start of sys.path.
So you should use the following to start your program:
python -m app.products.fish
Now when app.products.fish tries to import the app.utils.transform module, it will search for app in your current working directory (which contains the app/... tree) and succeed.
As a personal recommendation: don't put runnable scripts inside packages. Use packages only to store all the logic and functionality (functions, classes, constants, etc.) and write a separate script to run your application as you wish, putting it outside the package. This will save you from this kind of problems (including the double import trap), and has also the advantage that you can write several run configurations for the same package by just making a separate startup script for each.

IntelliJ Python unittests cannot import modules

I'm trying to configure my IntelliJ Ultimate 2017 IDE to run Python unit tests. It's not working.
The project is a Gradle project, and most modules are Java/Scala. There are several Python modules though.
The Python plugin is installed and the Python facet added to the appropriate modules.
The Python Interpreter is set up fine. The IDE can actually move around in the code with a ctrl-click action.
Under 'Project Structure' -> '<mymodule>' -> dependencies both the interpreter and the <Module source> are included.
Each Python module has a 'content root'. Immediately under this is a src folder, under which there is a test folder. The contents of the test folder mirror the src folder, except that files are prepended with test_ to avoid Python name collisions.
The test configuration has both 'Add source/content roots to PYTHONPATH' options checked. The interpreter is specified.
If test is marked as a tests folder within the module settings, I can right click and 'run tests' for the tests in that folder. However, ImportErrors occur, because it can't find modules within the src directory.
There are __init__.py files in all the appropriate places.
IntelliJ gives you what it is running, and if I run that on the command, it works, something like:
python -m unittest discover -s /Users/nathanielford/myrepo/mymodule/src/tests -p test_util.py
It appears as though the root path that is being used is set to wherever the unittest file I'm running is: it doesn't use src as the path, and so it cannot find things to import. There is no obvious place to specify this behavior. It didn't seem to work like this in the past.
This started happening recently, after an IntelliJ update. It's possible some configuration became screwy and needs to be fixed, but I don't know what that is. It's also possible that some bug was introduced into IntelliJ, but I don't know how to identify that, either. What am I missing?
Had the same issue and resolved it by no marking the test folder as excluded but just moving it out of the source.
So if the structure is:
src
--->package
--->resources
test
mark in IntelliJ src folder as Sources and src/resources as Resources.
You tests will run from within IDEA.
As I am new to python, I am not sure whether this will affect the packaging. Doing a build though doesn't export the test folder.
Hope that helps.
I have similar problems: cannot import manually installed module.
I try to add classpath in Mac environment parameters and intellij SDKs, but it doesn't work.
My final solution is to add the classpath of the module to Run/Debug Configurations:
Open Run/Debug Configurations and select your unittest class:
Run --> Edit Configurations...
Add your module's classpath to Environment variables:

How to convert existing directory into a python package in Pycharm4

I have an option to create a python package in PyCharm in the project directory
and when i use import newpackage PyCharm Recognizes this.
I'm using PyCharm4, and when i try to "refractor" a directory to a package, i can't because the button is DISABLED. i can only see the convert to python module option
I've Tried adding the directory to "paths"
And Still No Success in getting PyCharm to recognize import statements
I'm using PyCharm4
My Question again,
How can i convert a directory into a python package so that PyCharm will not show an error during import statements
Edit
I do have an __init__.py file inside the child directory. still no luck
Edit2 #joran
I've added the error screen like you requested, you can see the red underline marking the error
The reason you can not import from crawler is that crawler is not a python package. Its just a directory (as you already know)
It doesn't seem worth your time to troubleshoot what may be a bug in the IDE, when all you need to do is create the empty __init__.py yourself.
Having the __init__.py inside a child directory is not enough. Each directory needs its own __init__.py
Manually adding an empty file called __init__.py to that top level folder crawler folder will turn this into a python package.
Once done, refresh your Pycharm project.
You need to set the project directory as a source root (right click on it > Mark directory as > Source Root), and then synchronize the project !

PyCharm error: 'No Module' when trying to import own module (python script)

I have written a module (a file my_mod.py file residing in the folder my_module).
Currently, I am working in the file cool_script.py that resides in the folder cur_proj. I have opened the folder in PyCharm using File -- open (and I assume, hence, it is a PyCharm project).
In ProjectView (CMD-7), I can see my project cur_proj (in red) and under "External Libraries" I do see my_module. In cool_script.py, I can write
from my_module import my_mod as mm
and PyCharm even makes suggestion for my_mod. So far so good.
However, when I try to run cool_script.py, PyCharm tells me
"No module named my_module"
This seems strange to me, because
A) in the terminal (OS 10.10.2), in python, I can import the module no problem -- there is a corresponding entry in the PYTHONPATH in .bashrc
B) in PyCharm -- Settings -- Project cur_proj -- Project Interpreter -- CogWheel next to python interpreter -- more -- show paths for selected interpreter icon, the paths from PYTHONPATH do appear (as I think they should)
Hence, why do I get the error when I try to run cool_script.py? -- What am I missing?
Notes:
I am not declaring a different / special python version at the top of cool_script.py
I made sure that the path to my_module is correct
I put __init__.py files (empty files) both in my_module and in cur_proj
I am not using virtualenv
Addendum 2015-Feb-25
When I go in PyCharm to Run -- Edit Configurations, for my current project, there are two options that are selected with a check mark: "Add content roots to PYTHONPATH" and "Add source roots to PYTHONPATH". When I have both unchecked, I can load my module.
So it works now -- but why?
Further questions emerged:
What are "content roots" and what are "source roots"? And why does adding something to the PYTHONPATH make it somehow break?
should I uncheck both of those options all the time (so also in the defaults, not only the project specific configurations (left panel of the Run/Debug Configurations dialog)?
If your own module is in the same path, you need mark the path as Sources Root. In the project explorer, right-click on the directory that you want import. Then select Mark Directory As and select Sources Root.
So if you go to
-> Setting -> Project:My_project -> Project Structure,
Just the directory in which the source code is available and mark it as "Sources" (You can see it on the same window). The directory with source code should turn blue. Now u can import in modules residing in same directory.
PyCharm Community/Professional 2018.2.1
I was having this problem just now and I was able to solve it in sort of a similar way that #Beatriz Fonseca and #Julie pointed out.
If you go to File -> Settings -> Project: YourProjectName -> Project Structure, you'll have a directory layout of the project you're currently working in. You'll have to go through your directories and label them as being either the Source directory for all your Source files, or as a Resource folder for files that are strictly for importing.
You'll also want to make sure that you place __init__.py files within your resource directories, or really anywhere that you want to import from, and it'll work perfectly fine.
What I tried is to source the location where my files are.
e.g. E:\git_projects\My_project\__init__.py is my location.
I went to File -> Setting -> Project:My_project -> Project Structure and added the content root to about mention place E:\git_projects\My_project
it worked for me.
Always mark as source root the directory ABOVE the import!
So if the structure is
parent_folder/src/module.py
you must put something like:
from src.module import function_inside_module
and have parent_folder marked as "source folder" in PyCharm
I was getting the error with "Add source roots to PYTHONPATH" as well. My problem was that I had two folders with the same name, like project/subproject1/thing/src and project/subproject2/thing/src and I had both of them marked as source root. When I renamed one of the "thing" folders to "thing1" (any unique name), it worked.
Maybe if PyCharm automatically adds selected source roots, it doesn't use the full path and hence mixes up folders with the same name.
my_module is a folder not a module and you can't import a folder, try moving my_mod.py to the same folder as the cool_script.py and then doimport my_mod as mm. This is because python only looks in the current directory and sys.path, and so wont find my_mod.py unless it's in the same directory
Or you can look here for an answer telling you how to import from other directories.
As to your other questions, I do not know as I do not use PyCharm.
The key confusing step that must be done is to recreate the run configuration for the source file that you're trying to execute, so that the IDE picks up the new paths.
The way that actually worked for me was to go to Run/Edit Configurations..., select the configuration for the file that you're trying to run on the left side, uncheck the "Add source roots to PYTHONPATH" box, save, and then go back and check the box and save. THEN it would work.
This can be caused when Python interpreter can't find your code. You have to mention explicitly to Python to find your code in this location.
To do so:
Go to your python console
Add sys.path.extend(['your module location']) to Python console.
In your case:
Go to your python console,
On the start, write the following code:
import sys
sys.path.extend([my module URI location])
Once you have written this statement you can run following command:
from mymodule import functions
The solution for this problem without having to Mark Directory as Source Root is to Edit Run Configurations and in Execution select the option "Redirect input from" and choose script you want to run. This works because it is then treated as if the script was run interactively in this directory. However Python will still mark the module name with an error "no module named x":
When the interpreter executes the import statement, it searches for x.py in a list of directories assembled from the following sources:
The directory from which the input script was run or the current directory if the interpreter is being run interactively
The list of directories contained in the PYTHONPATH environment variable, if it is set.
An installation-dependent list of directories configured at the time Python is installed, in my case usr/lib/python3.6 on Ubuntu.
Content roots are folders holding your project code while source roots are defined as same too. The only difference i came to understand was that the code in source roots is built before the code in the content root.
Unchecking them wouldn't affect the runtime till the point you're not making separate modules in your package which are manually connected to Django. That means if any of your files do not hold the 'from django import...' or any of the function isn't called via django, unchecking these 2 options will result in a malfunction.
Update - the problem only arises when using Virtual Environmanet, and only when controlling the project via the provided terminal. Cause the terminal still works via the default system pyhtonpath and not the virtual env. while the python django control panel works fine.
PyCharm 2021.2.4 -- March 4th, 2022
Solved it by marking the source directory as "Source". Accomplished it by
right clicking on the source directory in the Project structure on the left of the IDE. I had a code source named src/.
navigate to "Mark Directory as".
select "Source" as directory type.
In short,
src -> Mark Directory as -> Source
This can occur if you are running a python file with the same name as one of its parent directories and try to import another
e.g.
Say you have files
my_project/processing/method1/processing.py
my_project/processing/algorithms/predict.py
And in processing.py you do something like:
from my_project.processing.algorithms.predict import Predict
it will throw the error
ln -s . someProject
If you have someDirectory/someProjectDir and two files, file1.py and file2.py, and file1.py tries to import with this line
from someProjectDir import file2
It won't work, even if you have designated the someProjectDir as a source directory, and even if it shows in preferences, project, project structure menu as a content root. The only way it will work is by linking the project as show above (unix command, works in mac, not sure of use or syntax for Windows).
There seems some mechanism where Pycharm does this automatically either in checkout from version control or adding as context root, since the soft link was created by Pycharm in a dependent project. Hence, just copying the same, although the weird replication of directory is annoying and necessity is perplexing. Also in the dependency where auto created, it doesn't show as new directory under version control. Perhaps comparison of .idea files will reveal more.
try installing the missing modules using the "terminal" on pycharm
python -m pip install your-module
Pycharm 2017.1.1
Click on View->ToolBar & View->Tool Buttons
On the left pane Project would be visible, right click on it and
press Autoscroll to source
and then run your code.
This worked for me.
The answer that worked for me was indeed what OP mentions in his 2015 update: uncheck these two boxes in your Python run config:
"Add content roots to PYTHONPATH"
"Add source roots to PYTHONPATH"
I already had the run config set to use the proper venv, so PyCharm doing additional work to add things to the path was not necessary. Instead it was causing errors.

Categories