Getting approximate vertices of curved-edge closed shapes (for calculating centroid and other properties) - python

I'm looking to draw outlines of 2D-closed irregular shapes with curved edges, and then compute both (a) the center of gravity (centroid) of the shape's area, and (b) the center of gravity of the shape's perimeter (i.e. the centroid of, e.g., a wire wrapped tightly around the outside of the shape). I have a late-beginner's level proficiency with Python and Matlab.
(a) and (b) are easy enough given a polygon's vertices: the centroid of a polygon's area is given by the equation here, and the centroid of a polygon's perimeter is just the average of all the line segments' midpoints weighted by the line segments' lengths. I've already written some functions to do this.
The trouble I'm having is getting/approximating those vertices from any of the ways I know how to draw a closed shape with curved edges. The best solution I've come up with so far is to use something like this matplotlib-based script to draw the curvy shape, and then call path.to_polygons(), which converts Path objects to polygons — but does so with surprisingly low resolution, such that the resulting approximation is quite poor (and too poor for my purposes — I'd like to compute those centroids fairly precisely).
So, I'm looking to either (i) find some way to increase the resolution of .to_polygons (about 10-fold), which would be satisfactory for my purposes, or (ii) try some new strategy entirely. One option would be to draw the shapes using something like Adobe Illustrator and then get an approximation of their vertices via some plugin or maybe an image processing toolbox (but I have no clue how to do either of those things). Another would be to draw the shape using some toolbox/library that already has built-in functions for finding the centroids of areas and perimeters (I've seen some having the former, but none with the latter). But I'm sure there are many other options out there that I haven't considered.

Related

Calculate 3D Plane that Rests on a 3D Surface

I have about 300,000 points defining my 3D surface. I would like to know if I dropped a infinitely stiff sheet onto my 3D surface, what the equation of that plane would be. I know I need to find the 3 points the sheet would rest on as that defines a plane, but I'm not sure how to find my 3 points out of the ~300,000. You can assume this 3D surface is very bumpy and that this sheet will most likely lie on 3 "hills".
Edit: Some more background knowledge. This is point cloud data for a scan of a 3D surface which is nearly flat. What I would like to know is how this object would rest if I flipped it over and put it on a completely flat surface. I realize that this surface may be able to rest on the table in various different ways depending on the density and thickness of the object but you can assume the number of ways is finite and I would like to know all of the different ways just in case.
Edit: After looking at some point cloud libraries I'm thinking of doing something like computing the curvature using a kd tree (using SciPy) and only looking at regions that have a negative curvature and then there should be 3+ regions with negative curvature so some combinatorics + iterations should give the correct 3 points for the plane(s).

How to select the minimal set of circles that covers another circle?

I'm looking for some solutions that, given a set S of circles with 2D-center points and radii, returns a minimal sub-set M in S that covers entirely a specific circle with 2d-center point and radius. This last circle is not in S.
I've chosen circles, but it doesn't matter if we change them to squares, hexagons, etc.
You have two distinct problems: you need to turn the geometric problem into a combinatoric problem, and then you need to solve the combinatoric problem. For the latter, you are looking at a minimum set cover problem, and there should be plenty of literature on that. Personally I like Knuth's Dancing Links approach to enumerate all solutions of a set cover, but I guess for a single minimal solution you can do better. A CPLEX formulation (to match your tag) would use a binary variable for each row, and a ≥1 constraint for each column.
So now about turning geometry into combinatorics. All the lines of all your circles divide the plane into a bunch of areas. The areas are delimited by lines. Of particular relevance are the points where two or more circles meet. The exact shape of the line between these points is less relevant, and you might imagine pulling those arcs straight to come up with a more classical planar graph representation. So compute all the pair-wise intersections between all your circles. Order all intersections of a single circle by angle and connect them with graph edges in that order. Do so for all circles. Then you can do a kind of bucket fill to determine for each circle which graph faces are within and which are outside.
Now you have your matrix for the set cover: every graph face which is inside the big circle is a column you need to cover. Every circle is a row and covers some of these faces, and you know which.

Sort points in 2D space to make a spline

I have a sequence of points which are distributed in 2D space. They represent a shape but they are not ordered. So, I can plot them as points to give an idea of the shape, but if I plot the line connecting them, I miss the shape because the order of points is not the right order of connection.
I'm wondering, how can I put them in the right order such that, if I connect them one by one in sequence, I get a spline showing the shape they represent? I found and tried the convex hull in Matlab but with no results. The shape could be complex, for example a star and with convex hull I get a shape that is too much simplified (many points are not taken into account).
Thanks for help!
EDIT
Could be everything the image. I've randomly created one to show you a possible case, with some parts that are coming into the shape, and also points can have different distances.
I've tried with convex hull function in Matlab, that's what I get. Every time the contour have a "sharp corner", I miss it and the final shape is not what I'm looking for. Also, Matlab function has no parameter to set to change convex hull result (at least I can't see anything in the help).
hull = convhull(coords(:,1),coords(:,2));
plot(coords(hull,1),coords(hull,2),'.r');
You need to somehow order your points, so they can be in a sequence; in the case of your drawing example, the points can likely be ordered using the minimal distance, to the next -not yet used- point, starting at one end (you'll probably have to provide the end).
Then you can draw a spline, maybe using Chaikin's algorithm for curves that will locally approximate a bezier curve.
You need to start working on this, and post another question with your code, if you are having difficulties.
Alpha shapes may perform better than convexhulls for this problem. Alpha shapes will touch all the points in the exterior of a point cloud, even can carve out holes.
But for complicated shape reconstruction, I would recommend you to try a beta-skeleton bsed approach discussed in https://people.eecs.berkeley.edu/~jrs/meshpapers/AmentaBernEppstein.pdf
See more details on β-Skeleton at https://en.wikipedia.org/wiki/Beta_skeleton
Quote from the linked article:
The circle-based β-skeleton may be used in image analysis to reconstruct the shape of a two-dimensional object, given a set of sample points on the boundary of the object (a computational form of the connect the dots puzzle where the sequence in which the dots are to be connected must be deduced by an algorithm rather than being given as part of the puzzle).
it is possible to prove that the choice β = 1.7 will correctly reconstruct the entire boundary of any smooth surface, and not generate any edges that do not belong to the boundary, as long as the samples are generated sufficiently densely relative to the local curvature of the surface
Cheers

Corner detection in an array of points

I get a pointcloud from my lidar which is basically an numpy array of points in 2D cartesian coordinates. Is there any efficient way to detect corners formed by such 2D points?
What I tried until now was to detect clusters, then apply RANSAC on each cluster to detect two lines and then estimate the intersection point of those two lines. This method works well when I know how many clusters I have (in this case I put 3 boxes in front of my robot) and when the surrounding of the robot is free and no other objects are detected.
What I would like to do is run a general corner detection, then take the points surrounding each corner and check if lines are orthogonal. If it is the case then I can consider this corner as feature. This would make my algorithm more flexible when it comes to the surrounding environment.
Here is a visualization of the data I get:
There are many many ways to do this. First thing I'd try in your case would be to chain with a reasonable distance threshold for discontinuities, using the natural lidar scan ordering of the points. Then it become a problem of either estimating local curature or, as you have done, grow and merge linear segments.

Unordered cloud point of polygon contour to polygon

Dear Stackoverflow community,
I have contours of irregular polygons as unordered datapoints (like on the figure here: https://s16.postimg.org/pum4m0pn9/figure_4.png), and I am trying to order them (ie. to create a polygon).
I cannot use the convex hull envelope because of the non convex shape of the polygon. I cannot ase a minimum distance criterion because some points of other parts of the contour lie closer (example: point A has to be joined with B, but is closer to C). I cannot use a clockwise ordering because of the irregular shape of the contour.
Do anyone knos a way to implement (preferentially in Python) an algorithm that would reorder the datapoints from a starting point?
look here finding holes in 2D point set for some ideas on how to solve this
I would create point density map (similar to above linked answer)
create list of all lines
so add to it all possible combination of lines (between close points)
not intersecting empty area in map
remove all intersecting lines
apply closed loop / connectivity analysis on the lines
then handle the rest of unused points
by splitting nearest line by them ...
depending on you map grid size and point density you may need to blend/smooth the map to cover gaps
if grid size is too big then you can miss details like on the image between points A,C
if it is too small then significant gaps may occur near low density areas
But as said this has more then one solution so you need to tweak this a bit to make the wanted output perhaps some User input for shaking the solution a bit until wanted solution found...
[notes]
you can handle this as more covex polygons ...
add line only if winding rule met
stop when no more lines found
start again with unused points
and in the end try to connect found non closed polygons ...

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