PyCharm on MacOS unable to handle files - python

I'm learning Python right now, and am trying to learn file handling using PyCharm CE on MacOS. While trying to open or create a new file, I get an error that goes something like this -
io.UnsupportedOperation: not readable
My code looks something like this:
import os
print (os.path.abspath(os.curdir))
fhand = open("file1.rtf", "w")
for line in fhand:
if line.startswith("from :") :
line = line.strip()
print(line)
How do I open a file and write something within it? And what is wrong with this code?

You opened the file in the wrong mode. This has nothing to do with PyCharm, but with your code :)
If you open a file in python (or most other programming languages), you have to specify, whether you want to read it or write it. You have more options than that, but let's keep it simple.
To do so, you use the second argument of the open() function, in your case "w", which stands for write.
If you want to read, change it to "r":
fhand = open("file1.rtf", "r")
If you want to read and write, you may use something like w+. To get an overview, you may find this diagram useful.
From the docs:
open() returns a file object, and is most commonly used with two arguments: open(filename, mode).
f = open('workfile', 'w')
The first argument is a string containing the filename. The second argument is another string containing a few characters describing the way in which the file will be used. mode can be 'r' when the file will only be read, 'w' for only writing (an existing file with the same name will be erased), and 'a' opens the file for appending; any data written to the file is automatically added to the end. 'r+' opens the file for both reading and writing. The mode argument is optional; 'r' will be assumed if it’s omitted.

Related

How to stop Python rewriting files?

Is there a way to stop Python rewriting files?
For example, when I run code once, it writes number "1" in text file. If I run same code tommorow, it won't erase that 1 from yesterday, it will add one more "1", so it should look like this:
1
1
My would look like this:
file = open("filename","w")
file.write(str(1) + "\n)
file.close()
If someone can tell me where is my mistake, please help me.
Thank you in advance !
If you read the docs for open, that second parameter that you're passing a "w" to is the mode:
mode is an optional string that specifies the mode in which the file is opened. It defaults to 'r' which means open for reading in text mode. Other common values are 'w' for writing (truncating the file if it already exists), 'x' for exclusive creation and 'a' for appending…
And then there's a handy chart of all of the mode characters, which reiterates the same information:
'w': open for writing, truncating the file first
...
'a': open for writing, appending to the end of the file if it exists
So, just use "a" instead of "w", and Python will add your new line to the end of the file, instead of truncating the file to nothing and then adding your new line to that now-empty file.
It's probably worth knowing that this is very closely based on the behavior of the fopen function from C and POSIX—which many other languages have also copied. So, in almost any language you run into, if there's a w mode for writing that overwrites the file, there's probably also an a mode for appending.

Python writing data to file only works when run from console

If I run
file = open("BAL.txt","w")
I = '200'
file.write(I)
file.close
from a script, it outputs nothing in the file. (It literally overwrites the file with nothing)
Furthermore, running cat BAL.txt just goes to the next line like nothing is in the file.
But if I run it line by line in a python console it works perfectly fine.
Why does this happen. ( I am a begginner learning python the mistake may be super obvious. I have thrown about 2 hours into trying to figure this out)
Thanks in advance
You aren't closing your file properly. To close it you are missing the () at the end of file.close so it should look like this:
file = open("BAL.txt", "w")
file.write("This has been written to a file")
file.close()
This site has the same example and may be of some use to you.
Another way, especially useful when you are appending multiple values into a single file is to use something like with open("BAL.txt","w") as file:. Here is your script rewritten to include this example:
I = '200'
with open("BAL.txt","w") as file:
file.write(I)
This opens our file with the value file and allows us to write values to it. Also note that file.close() is not needed here and when appending text w+ needs to be used.
to write to a file you do this:
file = open("file.txt","w")
file.write("something")
file.close()
when you use file.write() it deletes all of the contents of the file, if you want to write to the end of the file do this:
file = open("file.text","w+")
file.write(file.read()+"something")
file.close()
There are other ways to do this but this one is the most intuitive (not the most efficient), also the other way tends to be buggy so there is no reason to post it because this is reliable.
Firstly, you're missing the parentheses when you're closing the file. Secondly, writing to a file should be done like this:
file = open("BAL.txt", "w")
file.write("This has been written to a file")
file.close()
Let me know if you have any questions.

Read() function erases text in file [duplicate]

Started Python a week ago and I have some questions to ask about reading and writing to the same files. I've gone through some tutorials online but I am still confused about it. I can understand simple read and write files.
openFile = open("filepath", "r")
readFile = openFile.read()
print readFile
openFile = open("filepath", "a")
appendFile = openFile.write("\nTest 123")
openFile.close()
But, if I try the following I get a bunch of unknown text in the text file I am writing to. Can anyone explain why I am getting such errors and why I cannot use the same openFile object the way shown below.
# I get an error when I use the codes below:
openFile = open("filepath", "r+")
writeFile = openFile.write("Test abc")
readFile = openFile.read()
print readFile
openFile.close()
I will try to clarify my problems. In the example above, openFile is the object used to open file. I have no problems if I want write to it the first time. If I want to use the same openFile to read files or append something to it. It doesn't happen or an error is given. I have to declare the same/different open file object before I can perform another read/write action to the same file.
#I have no problems if I do this:
openFile = open("filepath", "r+")
writeFile = openFile.write("Test abc")
openFile2 = open("filepath", "r+")
readFile = openFile2.read()
print readFile
openFile.close()
I will be grateful if anyone can tell me what I did wrong here or is it just a Pythong thing. I am using Python 2.7. Thanks!
Updated Response:
This seems like a bug specific to Windows - http://bugs.python.org/issue1521491.
Quoting from the workaround explained at http://mail.python.org/pipermail/python-bugs-list/2005-August/029886.html
the effect of mixing reads with writes on a file open for update is
entirely undefined unless a file-positioning operation occurs between
them (for example, a seek()). I can't guess what
you expect to happen, but seems most likely that what you
intend could be obtained reliably by inserting
fp.seek(fp.tell())
between read() and your write().
My original response demonstrates how reading/writing on the same file opened for appending works. It is apparently not true if you are using Windows.
Original Response:
In 'r+' mode, using write method will write the string object to the file based on where the pointer is. In your case, it will append the string "Test abc" to the start of the file. See an example below:
>>> f=open("a","r+")
>>> f.read()
'Test abc\nfasdfafasdfa\nsdfgsd\n'
>>> f.write("foooooooooooooo")
>>> f.close()
>>> f=open("a","r+")
>>> f.read()
'Test abc\nfasdfafasdfa\nsdfgsd\nfoooooooooooooo'
The string "foooooooooooooo" got appended at the end of the file since the pointer was already at the end of the file.
Are you on a system that differentiates between binary and text files? You might want to use 'rb+' as a mode in that case.
Append 'b' to the mode to open the file in binary mode, on systems
that differentiate between binary and text files; on systems that
don’t have this distinction, adding the 'b' has no effect.
http://docs.python.org/2/library/functions.html#open
Every open file has an implicit pointer which indicates where data will be read and written. Normally this defaults to the start of the file, but if you use a mode of a (append) then it defaults to the end of the file. It's also worth noting that the w mode will truncate your file (i.e. delete all the contents) even if you add + to the mode.
Whenever you read or write N characters, the read/write pointer will move forward that amount within the file. I find it helps to think of this like an old cassette tape, if you remember those. So, if you executed the following code:
fd = open("testfile.txt", "w+")
fd.write("This is a test file.\n")
fd.close()
fd = open("testfile.txt", "r+")
print fd.read(4)
fd.write(" IS")
fd.close()
... It should end up printing This and then leaving the file content as This IS a test file.. This is because the initial read(4) returns the first 4 characters of the file, because the pointer is at the start of the file. It leaves the pointer at the space character just after This, so the following write(" IS") overwrites the next three characters with a space (the same as is already there) followed by IS, replacing the existing is.
You can use the seek() method of the file to jump to a specific point. After the example above, if you executed the following:
fd = open("testfile.txt", "r+")
fd.seek(10)
fd.write("TEST")
fd.close()
... Then you'll find that the file now contains This IS a TEST file..
All this applies on Unix systems, and you can test those examples to make sure. However, I've had problems mixing read() and write() on Windows systems. For example, when I execute that first example on my Windows machine then it correctly prints This, but when I check the file afterwards the write() has been completely ignored. However, the second example (using seek()) seems to work fine on Windows.
In summary, if you want to read/write from the middle of a file in Windows I'd suggest always using an explicit seek() instead of relying on the position of the read/write pointer. If you're doing only reads or only writes then it's pretty safe.
One final point - if you're specifying paths on Windows as literal strings, remember to escape your backslashes:
fd = open("C:\\Users\\johndoe\\Desktop\\testfile.txt", "r+")
Or you can use raw strings by putting an r at the start:
fd = open(r"C:\Users\johndoe\Desktop\testfile.txt", "r+")
Or the most portable option is to use os.path.join():
fd = open(os.path.join("C:\\", "Users", "johndoe", "Desktop", "testfile.txt"), "r+")
You can find more information about file IO in the official Python docs.
Reading and Writing happens where the current file pointer is and it advances with each read/write.
In your particular case, writing to the openFile, causes the file-pointer to point to the end of file. Trying to read from the end would result EOF.
You need to reset the file pointer, to point to the beginning of the file before through seek(0) before reading from it
You can read, modify and save to the same file in python but you have actually to replace the whole content in file, and to call before updating file content:
# set the pointer to the beginning of the file in order to rewrite the content
edit_file.seek(0)
I needed a function to go through all subdirectories of folder and edit content of the files based on some criteria, if it helps:
new_file_content = ""
for directories, subdirectories, files in os.walk(folder_path):
for file_name in files:
file_path = os.path.join(directories, file_name)
# open file for reading and writing
with io.open(file_path, "r+", encoding="utf-8") as edit_file:
for current_line in edit_file:
if condition in current_line:
# update current line
current_line = current_line.replace('john', 'jack')
new_file_content += current_line
# set the pointer to the beginning of the file in order to rewrite the content
edit_file.seek(0)
# delete actual file content
edit_file.truncate()
# rewrite updated file content
edit_file.write(new_file_content)
# empties new content in order to set for next iteration
new_file_content = ""
edit_file.close()

Open/write deleting txt file contents?

I am bassicly trying to read a number from a file, convert it to an int, add one to it, then rewrite the new number back to the file. However every time I run this code when i open the .txt file it is blank. Any help would be appreciated thanks! I am a python newb.
f=open('commentcount.txt','r')
counts = f.readline()
f.close
counts1 = int(counts)
counts1 = counts1 + 1
print(counts1)
f2 = open('commentcount.txt','w') <---(the file overwriting seems to happen here?)
f2.write(str(counts1))
Having empty files
This issue is caused by you failing to close the file descriptor. You have f.close but it should be f.close() (a function call). And you also need an f2.close() in the end.
Without the close it takes a while until the contents of the buffer arrive in the file. And it is a good practice to close file descriptors as soon as they are not used.
As a side note, you can use the following syntactic sugar to ensure that the file descriptor is closed as soon as possible:
with open(file, mode) as f:
do_something_with(f)
Now, regarding the overwriting part:
Writing to file without overwriting the previous content.
Short answer: You don't open the file in the proper mode. Use the append mode ("a").
Long answer:
It is the intended behavior. Read the following:
>>> help(open)
Help on built-in function open in module __builtin__:
open(...)
open(name[, mode[, buffering]]) -> file object
Open a file using the file() type, returns a file object. This is the
preferred way to open a file. See file.__doc__ for further information.
>>> print file.__doc__
file(name[, mode[, buffering]]) -> file object
Open a file. The mode can be 'r', 'w' or 'a' for reading (default),
writing or appending. The file will be created if it doesn't exist
when opened for writing or appending; it will be truncated when
opened for writing. Add a 'b' to the mode for binary files.
Add a '+' to the mode to allow simultaneous reading and writing.
If the buffering argument is given, 0 means unbuffered, 1 means line
buffered, and larger numbers specify the buffer size. The preferred way
to open a file is with the builtin open() function.
Add a 'U' to mode to open the file for input with universal newline
support. Any line ending in the input file will be seen as a '\n'
in Python. Also, a file so opened gains the attribute 'newlines';
the value for this attribute is one of None (no newline read yet),
'\r', '\n', '\r\n' or a tuple containing all the newline types seen.
So, reading the manuals shows that if you want the content to be kept you should open in append mode:
open(file, "a")
you should use the with statement. this assume that the file descriptor is closed no matter what:
with open('file', 'r') as fd:
value = int(fd.read())
with open('file', 'w') as fd:
fd.write(value + 1)
You never close the file. If you don't properly close the file the OS might not commit any changes. To avoid this problem it is recommended that you use Python's with statement to open files as it it will close them for you once you are done with the file.
with open('my_file.txt', a) as f:
do_stuff()
python open file paramters:
w:
Opens a file for writing only. Overwrites the file if the file exists.
If the file does not exist, creates a new file for writing.
You can use a (append):
Opens a file for appending. The file pointer is at the end of the file
if the file exists. That is, the file is in the append mode. If the
file does not exist, it creates a new file for writing.
for more information you can read here
One more advice is to use with:
with open("x.txt","a") as f:
data = f.read()
............
For example:
with open('c:\commentcount.txt','r') as fp:
counts = fp.readline()
counts = str(int(counts) + 1)
with open('c:\commentcount.txt','w') as fp:
fp.write(counts)
Note this will work only if you have a file name commentcount and it has a int at the first line since r does not create new file, also it will be only one counter...it won't append a new number.

Saving data into a text file

def ConvertFile():
FileNameIn = 'Hexdata.dat'
HexFile = open(FileNameIn, 'r')
for Line in HexFile:
print (Line)
print (Binary(Line))
HexFile.close()
So far I have that, which, when the program is run, converts the Hexidecimal number in the file to binary. This is in a file called Hexdata.dat
What I want to do is then save the binary output into a file called Binarydata.dat
How would I approach this in code? Be aware I'm new with Python and haven't covered this properly. I've tried different bits of code but they've all been unsuccessful, as really, they're all guesses.
I'm not asking you to solve the problem for me, but more asking how I would save the output of a program into a new text file.
You're already most of the way there. You already know how to open a file for reading:
HexFile = open(FileNameIn, 'r')
The 'r' there means "open for reading". If you look at the documentation for the open function, you will see that replacing the r with a w will open a file for writing:
OutputFile = open(FileNameOut, 'w')
And then you can send output to it like this:
print >>OutputFile, "Something to print"
Or use the write method on the file object:
OutputFile.write("Something to print\n")
Read the documentation of the open function (to open the file in write mode) and File Objects (to write information to the opened file).
You have to have 2 files in this script. The one you're reading from and the one you're writing to. Use the option wb (write binary) when opening the file you are going to write into. These two links should help a beginner with little or no Python knowledge complete your exercise: Intro to File Objects and Tutorial on File I/O.
You are currently opening the file in reading mode, so in order to write to the file, you would want to open the file with the buffering mode as ('w'). Quote from: http://docs.python.org. You can do so easily by replacing your 'r' with 'w'.
'w' for writing (truncating the file if it already exists
For more reference see open(name[, mode[, buffering]])
# the file name
FileNameIn = 'Hexdata.dat'
# create a file object: open it with "write" mode
HexFile = open(FileNameIn,"w")
for line in HexFile:
HexFile.write(Binary(line))
HexFile.close()
Have you tried using open('Binarydata.dat', 'w') for writing to the file? There are plenty of ways to write to a file, most of which can be found here: http://docs.python.org/tutorial/inputoutput.html

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