multiprocessing.Process doesn't terminate after putting requests response.content to queue - python

I'm trying to run multiple API requests in parallel with multiprocessing.Process and requests. I put urls to parse into JoinableQueue instance and put back the content to the Queue instance. I've noticed that putting response.content into the Queue somehow prevents the process from terminating.
Here's simplified example with just 1 process (Python 3.5):
import multiprocessing as mp
import queue
import requests
import time
class ChildProcess(mp.Process):
def __init__(self, q, qout):
super().__init__()
self.qin = qin
self.qout = qout
self.daemon = True
def run(self):
while True:
try:
url = self.qin.get(block=False)
r = requests.get(url, verify=False)
self.qout.put(r.content)
self.qin.task_done()
except queue.Empty:
break
except requests.exceptions.RequestException as e:
print(self.name, e)
self.qin.task_done()
print("Infinite loop terminates")
if __name__ == '__main__':
qin = mp.JoinableQueue()
qout = mp.Queue()
for _ in range(5):
qin.put('http://en.wikipedia.org')
w = ChildProcess(qin, qout)
w.start()
qin.join()
time.sleep(1)
print(w.name, w.is_alive())
After running the code I get:
Infinite loop terminates
ChildProcess-1 True
Please help to understand why the process doesn't terminate after run function exits.
Update: added print statement to show the loop terminates

As noted in the Pipes and Queues documentation
if a child process has put items on a queue (and it has not used
JoinableQueue.cancel_join_thread), then that process will not
terminate until all buffered items have been flushed to the pipe.
This means that if you try joining that process you may get a deadlock
unless you are sure that all items which have been put on the queue
have been consumed.
...
Note that a queue created using a manager does not have this issue.
If you switch over to a manager queue, then the process terminates successfully:
import multiprocessing as mp
import queue
import requests
import time
class ChildProcess(mp.Process):
def __init__(self, q, qout):
super().__init__()
self.qin = qin
self.qout = qout
self.daemon = True
def run(self):
while True:
try:
url = self.qin.get(block=False)
r = requests.get(url, verify=False)
self.qout.put(r.content)
self.qin.task_done()
except queue.Empty:
break
except requests.exceptions.RequestException as e:
print(self.name, e)
self.qin.task_done()
print("Infinite loop terminates")
if __name__ == '__main__':
manager = mp.Manager()
qin = mp.JoinableQueue()
qout = manager.Queue()
for _ in range(5):
qin.put('http://en.wikipedia.org')
w = ChildProcess(qin, qout)
w.start()
qin.join()
time.sleep(1)
print(w.name, w.is_alive())

It's a bit hard to figure this out based on the Queue documentation - I struggled with the same problem.
The key concept here is that before a producer thread terminates, it joins any queues that it has put data into; that join then blocks until the queue's background thread terminates, which only happens when the queue is empty. So basically, before your ChildProcess can exit, someone has to consume all the stuff it put into the queue!
There is some documentation of the Queue.cancel_join_thread function, which is supposed to circumvent this problem, but I couldn't get it to have any effect - maybe I'm not using it correctly.
Here's an example modification you can make that should fix the issue:
if __name__ == '__main__':
qin = mp.JoinableQueue()
qout = mp.Queue()
for _ in range(5):
qin.put('http://en.wikipedia.org')
w = ChildProcess(qin, qout)
w.start()
qin.join()
while True:
try:
qout.get(True, 0.1) # Throw away remaining stuff in qout (or process it or whatever,
# just get it out of the queue so the queue background process
# can terminate, so your ChildProcess can terminate.
except queue.Empty:
break
w.join() # Wait for your ChildProcess to finish up.
# time.sleep(1) # Not necessary since we've joined the ChildProcess
print(w.name, w.is_alive())

Add a call to w.terminate() above the print message.
Regarding why the process doesn't terminate itself; your function code is an infinite loop, so it doesn't ever return. Calling terminate signals the process to kill itself.

Related

End a Process early in Python 3.6+

I've read that it's considered bad practice to kill a thread. (Is there any way to kill a Thread?) There are a LOT of answers there, and I'm wondering if even using a thread in the first place is the right answer for me.
I have a bunch multiprocessing.Processes. Essentially, each Process is doing this:
while some_condition:
result = self.function_to_execute(i, **kwargs_i)
# outQ is a multiprocessing.queue shared between all Processes
self.outQ.put(Result(i, result))
Problem is... I need a way to interrupt function_to_execute, but can't modify the function itself. Initially, I was thinking simply process.terminate(), but that appears to be unsafe with multiprocessing.queue.
Most likely (but not guaranteed), if I need to kill a thread, the 'main' program is going to be done soon. Is my safest option to do something like this? Or perhaps there is a more elegant solution than using a thread in the first place?
def thread_task():
while some_condition:
result = self.function_to_execute(i, **kwargs_i)
if (this_thread_is_not_daemonized):
self.outQ.put(Result(i, result))
t = Thread(target=thread_task)
t.start()
if end_early:
t.daemon = True
I believe the end result of this is that the Process that spawned the thread will continue to waste CPU cycles on a task I no longer care about the output for, but if the main program finishes, it'll clean up all my memory nicely.
The main problem with daemonizing a thread is that the main program could potentially continue for 30+ minutes even when I don't care about the output of that thread anymore.
From the threading docs:
If you want your threads to stop gracefully, make them non-daemonic
and use a suitable signalling mechanism such as an Event
Here is a contrived example of what I was thinking - no idea if it mimics what you are doing or can be adapted for your situation. Another caveat: I've never written any real concurrent code.
Create an Event object in the main process and pass it all the way to the thread.
Design the thread so that it loops until the Event object is set. Once you don't need the processing anymore SET the Event object in the main process. No need to modify the function being run in the thread.
from multiprocessing import Process, Queue, Event
from threading import Thread
import time, random, os
def f_to_run():
time.sleep(.2)
return random.randint(1,10)
class T(Thread):
def __init__(self, evt,q, func, parent):
self.evt = evt
self.q = q
self.func = func
self.parent = parent
super().__init__()
def run(self):
while not self.evt.is_set():
n = self.func()
self.q.put(f'PID {self.parent}-{self.name}: {n}')
def f(T,evt,q,func):
pid = os.getpid()
t = T(evt,q,func,pid)
t.start()
t.join()
q.put(f'PID {pid}-{t.name} is alive - {t.is_alive()}')
q.put(f'PID {pid}:DONE')
return 'foo done'
if __name__ == '__main__':
results = []
q = Queue()
evt = Event()
# two processes each with one thread
p= Process(target=f, args=(T, evt, q, f_to_run))
p1 = Process(target=f, args=(T, evt, q, f_to_run))
p.start()
p1.start()
while len(results) < 40:
results.append(q.get())
print('.',end='')
print('')
evt.set()
p.join()
p1.join()
while not q.empty():
results.append(q.get_nowait())
for thing in results:
print(thing)
I initially tried to use threading.Event but the multiprocessing module complained that it couldn't be pickled. I was actually surprised that the multiprocessing.Queue and multiprocessing.Event worked AND could be accessed by the thread.
Not sure why I started with a Thread subclass - I think I thought it would be easier to control/specify what happens in it's run method. But it can be done with a function also.
from multiprocessing import Process, Queue, Event
from threading import Thread
import time, random
def f_to_run():
time.sleep(.2)
return random.randint(1,10)
def t1(evt,q, func):
while not evt.is_set():
n = func()
q.put(n)
def g(t1,evt,q,func):
t = Thread(target=t1,args=(evt,q,func))
t.start()
t.join()
q.put(f'{t.name} is alive - {t.is_alive()}')
return 'foo'
if __name__ == '__main__':
q = Queue()
evt = Event()
p= Process(target=g, args=(t1, evt, q, f_to_run))
p.start()
time.sleep(5)
evt.set()
p.join()

Why does my multiprocess queue not appear to be thread safe?

I am building a watchdog timer that runs another Python program, and if it fails to find a check-in from any of the threads, shuts down the whole program. This is so it will, eventually, be able to take control of needed communication ports. The code for the timer is as follows:
from multiprocessing import Process, Queue
from time import sleep
from copy import deepcopy
PATH_TO_FILE = r'.\test_program.py'
WATCHDOG_TIMEOUT = 2
class Watchdog:
def __init__(self, filepath, timeout):
self.filepath = filepath
self.timeout = timeout
self.threadIdQ = Queue()
self.knownThreads = {}
def start(self):
threadIdQ = self.threadIdQ
process = Process(target = self._executeFile)
process.start()
try:
while True:
unaccountedThreads = deepcopy(self.knownThreads)
# Empty queue since last wake. Add new thread IDs to knownThreads, and account for all known thread IDs
# in queue
while not threadIdQ.empty():
threadId = threadIdQ.get()
if threadId in self.knownThreads:
unaccountedThreads.pop(threadId, None)
else:
print('New threadId < {} > discovered'.format(threadId))
self.knownThreads[threadId] = False
# If there is a known thread that is unaccounted for, then it has either hung or crashed.
# Shut everything down.
if len(unaccountedThreads) > 0:
print('The following threads are unaccounted for:\n')
for threadId in unaccountedThreads:
print(threadId)
print('\nShutting down!!!')
break
else:
print('No unaccounted threads...')
sleep(self.timeout)
# Account for any exceptions thrown in the watchdog timer itself
except:
process.terminate()
raise
process.terminate()
def _executeFile(self):
with open(self.filepath, 'r') as f:
exec(f.read(), {'wdQueue' : self.threadIdQ})
if __name__ == '__main__':
wd = Watchdog(PATH_TO_FILE, WATCHDOG_TIMEOUT)
wd.start()
I also have a small program to test the watchdog functionality
from time import sleep
from threading import Thread
from queue import SimpleQueue
Q_TO_Q_DELAY = 0.013
class QToQ:
def __init__(self, processQueue, threadQueue):
self.processQueue = processQueue
self.threadQueue = threadQueue
Thread(name='queueToQueue', target=self._run).start()
def _run(self):
pQ = self.processQueue
tQ = self.threadQueue
while True:
while not tQ.empty():
sleep(Q_TO_Q_DELAY)
pQ.put(tQ.get())
def fastThread(q):
while True:
print('Fast thread, checking in!')
q.put('fastID')
sleep(0.5)
def slowThread(q):
while True:
print('Slow thread, checking in...')
q.put('slowID')
sleep(1.5)
def hangThread(q):
print('Hanging thread, checked in')
q.put('hangID')
while True:
pass
print('Hello! I am a program that spawns threads!\n\n')
threadQ = SimpleQueue()
Thread(name='fastThread', target=fastThread, args=(threadQ,)).start()
Thread(name='slowThread', target=slowThread, args=(threadQ,)).start()
Thread(name='hangThread', target=hangThread, args=(threadQ,)).start()
QToQ(wdQueue, threadQ)
As you can see, I need to have the threads put into a queue.Queue, while a separate object slowly feeds the output of the queue.Queue into the multiprocessing queue. If instead I have the threads put directly into the multiprocessing queue, or do not have the QToQ object sleep in between puts, the multiprocessing queue will lock up, and will appear to always be empty on the watchdog side.
Now, as the multiprocessing queue is supposed to be thread and process safe, I can only assume I have messed something up in the implementation. My solution seems to work, but also feels hacky enough that I feel I should fix it.
I am using Python 3.7.2, if it matters.
I suspect that test_program.py exits.
I changed the last few lines to this:
tq = threadQ
# tq = wdQueue # option to send messages direct to WD
t1 = Thread(name='fastThread', target=fastThread, args=(tq,))
t2 = Thread(name='slowThread', target=slowThread, args=(tq,))
t3 = Thread(name='hangThread', target=hangThread, args=(tq,))
t1.start()
t2.start()
t3.start()
QToQ(wdQueue, threadQ)
print('Joining with threads...')
t1.join()
t2.join()
t3.join()
print('test_program exit')
The calls to join() means that the test program never exits all by itself since none of the threads ever exit.
So, as is, t3 hangs and the watchdog program detects this and detects the unaccounted for thread and stops the test program.
If t3 is removed from the above program, then the other two threads are well behaved and the watchdog program allows the test program to continue indefinitely.

python multiprocessing - process hangs on join for large queue

I'm running python 2.7.3 and I noticed the following strange behavior. Consider this minimal example:
from multiprocessing import Process, Queue
def foo(qin, qout):
while True:
bar = qin.get()
if bar is None:
break
qout.put({'bar': bar})
if __name__ == '__main__':
import sys
qin = Queue()
qout = Queue()
worker = Process(target=foo,args=(qin,qout))
worker.start()
for i in range(100000):
print i
sys.stdout.flush()
qin.put(i**2)
qin.put(None)
worker.join()
When I loop over 10,000 or more, my script hangs on worker.join(). It works fine when the loop only goes to 1,000.
Any ideas?
The qout queue in the subprocess gets full. The data you put in it from foo() doesn't fit in the buffer of the OS's pipes used internally, so the subprocess blocks trying to fit more data. But the parent process is not reading this data: it is simply blocked too, waiting for the subprocess to finish. This is a typical deadlock.
There must be a limit on the size of queues. Consider the following modification:
from multiprocessing import Process, Queue
def foo(qin,qout):
while True:
bar = qin.get()
if bar is None:
break
#qout.put({'bar':bar})
if __name__=='__main__':
import sys
qin=Queue()
qout=Queue() ## POSITION 1
for i in range(100):
#qout=Queue() ## POSITION 2
worker=Process(target=foo,args=(qin,))
worker.start()
for j in range(1000):
x=i*100+j
print x
sys.stdout.flush()
qin.put(x**2)
qin.put(None)
worker.join()
print 'Done!'
This works as-is (with qout.put line commented out). If you try to save all 100000 results, then qout becomes too large: if I uncomment out the qout.put({'bar':bar}) in foo, and leave the definition of qout in POSITION 1, the code hangs. If, however, I move qout definition to POSITION 2, then the script finishes.
So in short, you have to be careful that neither qin nor qout becomes too large. (See also: Multiprocessing Queue maxsize limit is 32767)
I had the same problem on python3 when tried to put strings into a queue of total size about 5000 cahrs.
In my project there was a host process that sets up a queue and starts subprocess, then joins. Afrer join host process reads form the queue. When subprocess producess too much data, host hungs on join. I fixed this using the following function to wait for subprocess in the host process:
from multiprocessing import Process, Queue
from queue import Empty
def yield_from_process(q: Queue, p: Process):
while p.is_alive():
p.join(timeout=1)
while True:
try:
yield q.get(block=False)
except Empty:
break
I read from queue as soon as it fills so it never gets very large
I was trying to .get() an async worker after the pool had closed
indentation error outside of a with block
i had this
with multiprocessing.Pool() as pool:
async_results = list()
for job in jobs:
async_results.append(
pool.apply_async(
_worker_func,
(job,),
)
)
# wrong
for async_result in async_results:
yield async_result.get()
i needed this
with multiprocessing.Pool() as pool:
async_results = list()
for job in jobs:
async_results.append(
pool.apply_async(
_worker_func,
(job,),
)
)
# right
for async_result in async_results:
yield async_result.get()

how to kill zombie processes created by multiprocessing module?

I'm very new to multiprocessing module. And I just tried to create the following: I have one process that's job is to get message from RabbitMQ and pass it to internal queue (multiprocessing.Queue). Then what I want to do is : spawn a process when new message comes in. It works, but after the job is finished it leaves a zombie process not terminated by it's parent. Here is my code:
Main Process:
#!/usr/bin/env python
import multiprocessing
import logging
import consumer
import producer
import worker
import time
import base
conf = base.get_settings()
logger = base.logger(identity='launcher')
request_order_q = multiprocessing.Queue()
result_order_q = multiprocessing.Queue()
request_status_q = multiprocessing.Queue()
result_status_q = multiprocessing.Queue()
CONSUMER_KEYS = [{'queue':'product.order',
'routing_key':'product.order',
'internal_q':request_order_q}]
# {'queue':'product.status',
# 'routing_key':'product.status',
# 'internal_q':request_status_q}]
def main():
# Launch consumers
for key in CONSUMER_KEYS:
cons = consumer.RabbitConsumer(rabbit_q=key['queue'],
routing_key=key['routing_key'],
internal_q=key['internal_q'])
cons.start()
# Check reques_order_q if not empty spaw a process and process message
while True:
time.sleep(0.5)
if not request_order_q.empty():
handler = worker.Worker(request_order_q.get())
logger.info('Launching Worker')
handler.start()
if __name__ == "__main__":
main()
And here is my Worker:
import multiprocessing
import sys
import time
import base
conf = base.get_settings()
logger = base.logger(identity='worker')
class Worker(multiprocessing.Process):
def __init__(self, msg):
super(Worker, self).__init__()
self.msg = msg
self.daemon = True
def run(self):
logger.info('%s' % self.msg)
time.sleep(10)
sys.exit(1)
So after all the messages gets processed I can see processes with ps aux command. But I would really like them to be terminated once finished.
Thanks.
Using multiprocessing.active_children is better than Process.join. The function active_children cleans any zombies created since the last call to active_children. The method join awaits the selected process. During that time, other processes can terminate and become zombies, but the parent process will not notice, until the awaited method is joined. To see this in action:
import multiprocessing as mp
import time
def main():
n = 3
c = list()
for i in range(n):
d = dict(i=i)
p = mp.Process(target=count, kwargs=d)
p.start()
c.append(p)
for p in reversed(c):
p.join()
print('joined')
def count(i):
print(f'{i} going to sleep')
time.sleep(i * 10)
print(f'{i} woke up')
if __name__ == '__main__':
main()
The above will create 3 processes that terminate 10 seconds apart each. As the code is, the last process is joined first, so the other two, which terminated earlier, will be zombies for 20 seconds. You can see them with:
ps aux | grep Z
There will be no zombies if the processes are awaited in the sequence that they will terminate. Remove the call to the function reversed to see this case. However, in real applications we rarely know the sequence that children will terminate, so using the method multiprocessing.Process.join will result in some zombies.
The alternative active_children does not leave any zombies.
In the above example, replace the loop for p in reversed(c): with:
while True:
time.sleep(1)
if not mp.active_children():
break
and see what happens.
A couple of things:
Make sure the parent joins its children, to avoid zombies. See Python Multiprocessing Kill Processes
You can check whether a child is still running with the is_alive() member function. See http://docs.python.org/2/library/multiprocessing.html#multiprocessing.Process
Use active_children.
multiprocessing.active_children

Checking on a thread / remove from list

I have a thread which extends Thread. The code looks a little like this;
class MyThread(Thread):
def run(self):
# Do stuff
my_threads = []
while has_jobs() and len(my_threads) < 5:
new_thread = MyThread(next_job_details())
new_thread.run()
my_threads.append(new_thread)
for my_thread in my_threads
my_thread.join()
# Do stuff
So here in my pseudo code I check to see if there is any jobs (like a db etc) and if there is some jobs, and if there is less than 5 threads running, create new threads.
So from here, I then check over my threads and this is where I get stuck, I can use .join() but my understanding is that - this then waits until it's finished so if the first thread it checks is still in progress, it then waits till it's done - even if the other threads are finished....
so is there a way to check if a thread is done, then remove it if so?
eg
for my_thread in my_threads:
if my_thread.done():
# process results
del (my_threads[my_thread]) ?? will that work...
As TokenMacGuy says, you should use thread.is_alive() to check if a thread is still running. To remove no longer running threads from your list you can use a list comprehension:
for t in my_threads:
if not t.is_alive():
# get results from thread
t.handled = True
my_threads = [t for t in my_threads if not t.handled]
This avoids the problem of removing items from a list while iterating over it.
mythreads = threading.enumerate()
Enumerate returns a list of all Thread objects still alive.
https://docs.python.org/3.6/library/threading.html
you need to call thread.isAlive()to find out if the thread is still running
The answer has been covered, but for simplicity...
# To filter out finished threads
threads = [t for t in threads if t.is_alive()]
# Same thing but for QThreads (if you are using PyQt)
threads = [t for t in threads if t.isRunning()]
Better way is to use Queue class:
http://docs.python.org/library/queue.html
Look at the good example code in the bottom of documentation page:
def worker():
while True:
item = q.get()
do_work(item)
q.task_done()
q = Queue()
for i in range(num_worker_threads):
t = Thread(target=worker)
t.daemon = True
t.start()
for item in source():
q.put(item)
q.join() # block until all tasks are done
A easy solution to check thread finished or not. It is thread safe
Install pyrvsignal
pip install pyrvsignal
Example:
import time
from threading import Thread
from pyrvsignal import Signal
class MyThread(Thread):
started = Signal()
finished = Signal()
def __init__(self, target, args):
self.target = target
self.args = args
Thread.__init__(self)
def run(self) -> None:
self.started.emit()
self.target(*self.args)
self.finished.emit()
def do_my_work(details):
print(f"Doing work: {details}")
time.sleep(10)
def started_work():
print("Started work")
def finished_work():
print("Work finished")
thread = MyThread(target=do_my_work, args=("testing",))
thread.started.connect(started_work)
thread.finished.connect(finished_work)
thread.start()

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