I'm trying to install openCV in python
I have the same problem as mentioned in those several github and stackoverflow pages but I'm still stuck:
github openCV issue #8382
github openCV issue #6027
github openCV issue #6066
Here is an ouput of the terminal:
mymacs-MacBook-Pro:build mymac$ cmake -D CMAKE_BUILD_TYPE=RELEASE \
> -D CMAKE_INSTALL_PREFIX=/usr/local \
> -D INSTALL_C_EXAMPLES=OFF \
> -D INSTALL_PYTHON_EXAMPLES=ON \
> -D OPENCV_EXTRA_MODULES_PATH=~/opencv_contrib/modules \
> -D BUILD_EXAMPLES=ON ..
CMake Deprecation Warning at CMakeLists.txt:72 (cmake_policy):
The OLD behavior for policy CMP0022 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt:77 (cmake_policy):
The OLD behavior for policy CMP0026 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt:82 (cmake_policy):
The OLD behavior for policy CMP0042 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
-- Could NOT find GDAL (missing: GDAL_LIBRARY GDAL_INCLUDE_DIR)
-- Checking for module 'gstreamer-base-1.0'
-- No package 'gstreamer-base-1.0' found
-- Checking for module 'gstreamer-video-1.0'
-- No package 'gstreamer-video-1.0' found
-- Checking for module 'gstreamer-app-1.0'
-- No package 'gstreamer-app-1.0' found
-- Checking for module 'gstreamer-riff-1.0'
-- No package 'gstreamer-riff-1.0' found
-- Checking for module 'gstreamer-pbutils-1.0'
-- No package 'gstreamer-pbutils-1.0' found
-- Checking for module 'gstreamer-base-0.10'
-- No package 'gstreamer-base-0.10' found
-- Checking for module 'gstreamer-video-0.10'
-- No package 'gstreamer-video-0.10' found
-- Checking for module 'gstreamer-app-0.10'
-- No package 'gstreamer-app-0.10' found
-- Checking for module 'gstreamer-riff-0.10'
-- No package 'gstreamer-riff-0.10' found
-- Checking for module 'gstreamer-pbutils-0.10'
-- No package 'gstreamer-pbutils-0.10' found
-- Checking for module 'libv4l1'
-- No package 'libv4l1' found
-- Checking for module 'libv4l2'
-- No package 'libv4l2' found
-- Looking for linux/videodev.h
-- Looking for linux/videodev.h - not found
-- Looking for linux/videodev2.h
-- Looking for linux/videodev2.h - not found
-- Looking for sys/videoio.h
-- Looking for sys/videoio.h - not found
-- Checking for module 'libgphoto2'
-- No package 'libgphoto2' found
-- Found PythonInterp: /usr/local/bin/python2.7 (found suitable version "2.7.14", minimum required is "2.7")
-- Found PythonLibs: /usr/local/Cellar/python/2.7.10/Frameworks/Python.framework/Versions/2.7/bin (found suitable exact version "2.7.14")
-- Found PythonInterp: /Users/mymac/.virtualenvs/cv/bin/python (found suitable version "3.5.4", minimum required is "3.4")
-- Found PythonLibs: /usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/config-3.5m/libpython3.5.dylib (Required is exact version "3.5.4")
-- Could NOT find Matlab (missing: MATLAB_MEX_SCRIPT MATLAB_INCLUDE_DIRS MATLAB_ROOT_DIR MATLAB_LIBRARIES MATLAB_LIBRARY_DIRS MATLAB_MEXEXT MATLAB_ARCH MATLAB_BIN)
-- VTK is not found. Please set -DVTK_DIR in CMake to VTK build directory, or to VTK install subdirectory with VTKConfig.cmake file
-- Caffe: NO
-- Protobuf: NO
-- Glog: NO
CMake Error at /Users/mymac/opencv_contrib/modules/datasets/CMakeLists.txt:7 (ocv_append_source_files_cxx_compiler_options):
Unknown CMake command "ocv_append_source_files_cxx_compiler_options".
-- Configuring incomplete, errors occurred!
See also "/Users/mymac/opencv/build/CMakeFiles/CMakeOutput.log".
See also "/Users/mymac/opencv/build/CMakeFiles/CMakeError.log".
mymacs-MacBook-Pro:build mymac$
As mentioned on this here I tried checkout the same version for opencv_contrib that I did for opencv by running the following command:
cd ~
cd opencv
git checkout 3.0.0
cd ~
cd opencv_contrib
git checkout 3.0.0
It worked
I then ran the command make -j4
but the two following error messages appeared:
In file included from /Users/mymac/opencv_contrib/modules/cvv/src/gui/main_call_window.cpp:1:
In file included from /Users/mymac/opencv_contrib/modules/cvv/src/gui/main_call_window.hpp:9:
In file included from /Users/mymac/opencv_contrib/modules/cvv/src/gui/overview_panel.hpp:12:/Users/mymac/opencv_contrib/modules/cvv/src/gui/../stfl/stfl_engine.hpp:1056:30: error: use 'template' keyword to treat
'value' as a dependent template name
return settings.value(key).value<QStringList>();
^
template
In file included from /Users/mymac/opencv_contrib/modules/cvv/src/controller/view_controller.cpp:12:
In file included from /Users/mymac/opencv_contrib/modules/cvv/src/controller/../gui/overview_panel.hpp:12: /Users/mymac/opencv_contrib/modules/cvv/src/controller/../gui/../stfl/stfl_engine.hpp:1056:30: error: use 'template'
keyword to treat 'value' as a dependent template name
return settings.value(key).value<QStringList>();
^
template
For this i created a new question here
Related
I'm trying to follow the instructions here to install ParallelFDTD's python bindings on a windows machine. I've barely worked with C++ before, and certainly never with Boost! Mostly have experience with Python.
So far, I have done the following:
installed the Windows SDK
installed the CUDA toolkit
I have successfully created a conda environment:
conda create -n PFDTD -c conda-forge boost py-boost cmake numpy scipy
conda activate PFDTD
Running conda list shows that boost 1.73 is installed, along with py-boost 1.73 and libboost 1.73 as well as boost-cpp 1.68.
So far so good.
When I try to install and build the library as per the instructions with the following, I get an error
pip install git+https://github.com/AaltoRSE/ParallelFDTD.git
produces:
Building wheels for collected packages: pyParallelFDTD
Running command python setup.py bdist_wheel
running bdist_wheel
running build
running build_py
creating build
creating build\lib.win-amd64-cpython-38
creating build\lib.win-amd64-cpython-38\pyParallelFDTD
copying dist\libPyFDTD\__init__.py -> build\lib.win-amd64-cpython-38\pyParallelFDTD
running build_ext
-- Building for: Visual Studio 17 2022
-- Selecting Windows SDK version 10.0.22621.0 to target Windows 10.0.22000.
-- The CXX compiler identification is MSVC 19.33.31630.0
-- The CUDA compiler identification is NVIDIA 11.8.89
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: C:/Program Files/Microsoft Visual Studio/2022/Community/VC/Tools/MSVC/14.33.31629/bin/Hostx64/x64/cl.exe - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting CUDA compiler ABI info
-- Detecting CUDA compiler ABI info - done
-- Check for working CUDA compiler: C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v11.8/bin/nvcc.exe - skipped
-- Detecting CUDA compile features
-- Detecting CUDA compile features - done
-- CONDA_PREFIX C:\ProgramData\Anaconda3\envs\opti-acoustics
-- Found Python: C:/ProgramData/Anaconda3/envs/opti-acoustics/python.exe (found version "3.8.13") found components: Interpreter
-- Found PythonLibs: C:/Python310/libs/python310.lib (found version "3.10.0")
-- CONDA_PREFIX C:\ProgramData\Anaconda3\envs\opti-acoustics
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - not found
-- Found Threads: TRUE
CMake Error at C:/ProgramData/Anaconda3/envs/opti-acoustics/Library/share/cmake-3.24/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find Boost (missing: Boost_INCLUDE_DIR system thread date_time
unit_test_framework python38 chrono numpy38) (Required is at least version
"1.41")
Call Stack (most recent call first):
C:/ProgramData/Anaconda3/envs/opti-acoustics/Library/share/cmake-3.24/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
C:/ProgramData/Anaconda3/envs/opti-acoustics/Library/share/cmake-3.24/Modules/FindBoost.cmake:2376 (find_package_handle_standard_args)
CMakeLists.txt:86 (find_package)
-- Configuring incomplete, errors occurred!
See also "C:/Users/../AppData/Local/Temp/pip-req-build-3mu877y3/build/temp.win-amd64-cpython-38/Release/CMakeFiles/CMakeOutput.log".
See also "C:/Users/../AppData/Local/Temp/pip-req-build-3mu877y3/build/temp.win-amd64-cpython-38/Release/CMakeFiles/CMakeError.log".
The key part of the error message seems to be:
Could NOT find Boost (missing: Boost_INCLUDE_DIR system thread date_time
unit_test_framework python38 chrono numpy38) (Required is at least version
"1.41")
The instructions suggest that the installation with conda should be sufficient, but it seems some environment variables are missing. In ParallelFDTD's CMakeLists.txt, you can see how it tries to handle boost installation in a conda env here.
It appears that conda install -c conda-forge boost py-boost installed successfully, for instance there are a lot of .hpp files and a /python folder as well as a bunch of other directories in C:\ProgramData\Anaconda3\envs\acoustics_env\library\include\boost. There are also a lot of boost_xxx.dll files in C:\ProgramData\Anaconda3\envs\acoustics_env\library\bin.
So far, I've forked the ParallelFDTD library so that I can make changes to the CMakeLists.txt, including pointing the BOOST_ROOT, Boost_INCLUDE_DIR and/or Boost_LIBRARY_DIR explicitly to folders in the anaconda env if need be, but I haven't been able to figure out the correct paths to use... I can also try installing boost manually, but just not sure what the best approach is.
Desperate for help! I'm sure it's a simple step I am missing...
Found lots of other threads that were somewhat related, but none of them seemed to be dealing with this kind of context of working in a conda environment with boost/py-boost.
I'm trying to install the pyarrow==0.17.1 package on my MacBook pro machine (Apple M1 chip) and I'm getting the following error
-- Found PkgConfig: /opt/homebrew/bin/pkg-config (found version "0.29.2")
-- Found Arrow: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/include (found version "7.0.0")
-- Arrow version: 7.0.0 (HOME: /opt/homebrew/Cellar/apache-arrow/7.0.0_3)
-- Arrow SO and ABI version: 700
-- Arrow full SO version: 700.0.0
-- Found the Arrow core shared library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow.dylib
-- Found the Arrow core import library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow.dylib
-- Found the Arrow core static library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow.a
-- Found ArrowPython: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/include (found version "7.0.0")
-- Found the Arrow Python by HOME: /opt/homebrew/Cellar/apache-arrow/7.0.0_3
-- Found the Arrow Python shared library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow_python.dylib
-- Found the Arrow Python import library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow_python.dylib
-- Found the Arrow Python static library: /opt/homebrew/Cellar/apache-arrow/7.0.0_3/lib/libarrow_python.a
-- Configuring done
-- Generating done
-- Build files have been written to: /private/var/folders/6m/ychzdp6s7l390zfm77myvxzr0000gn/T/pip-install-lv5qrivl/pyarrow_12e0171ed6fa433da71d5392c3e10c3a/build/temp.macosx-12.0-arm64-3.7
-- Finished cmake for pyarrow
-- Running cmake --build for pyarrow
cmake --build . --config release --
[ 6%] Compiling Cython CXX source for lib...
[ 6%] Built target lib_pyx
[ 13%] Building CXX object CMakeFiles/lib.dir/lib.cpp.o
/private/var/folders/6m/ychzdp6s7l390zfm77myvxzr0000gn/T/pip-install-lv5qrivl/pyarrow_12e0171ed6fa433da71d5392c3e10c3a/build/temp.macosx-12.0-arm64-3.7/lib.cpp:774:10: fatal error: 'arrow/python/config.h' file not found
#include "arrow/python/config.h"
^~~~~~~~~~~~~~~~~~~~~~~
1 error generated.
make[2]: *** [CMakeFiles/lib.dir/lib.cpp.o] Error 1
make[1]: *** [CMakeFiles/lib.dir/all] Error 2
make: *** [all] Error 2
error: command 'cmake' failed with exit status 2
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure
I couldn't find a proven solution for this problem, the only reference I did review is the following - https://github.com/apache/arrow/issues/2281, as mentioned, no proven solution there.
Versions I'm using are:
python 3.7.12
pip 22.0.4
On my machine, I have the following installed - apache-arrow, apache-arrow-glib, cmake.
I've also tried to install the package with the --no-use-pep517 flag as the following- pip install --no-use-pep517 pyarrow==0.17.1 - no success there.
I took a peek inside arrow/python/ and config.h is obviously missing, I also look inside arrow/ which does contains a config.h, however, it's not the config.h that was required.
Does anyone have an idea how to solve this issue?
pyarrow==0.17.1 predates M1 chips (May 2020 vs November 2020).
Any particular reason you wouldn't want to use pyarrow==7.0.0? Your brew installed arrow seems to be 7.0.0 too.
I am trying to install ViZDoom on Ubuntu system. I am following the steps given the following link https://github.com/mwydmuch/ViZDoom/blob/master/doc/Building.md.
As shown below:
sudo apt-get install build-essential zlib1g-dev libsdl2-dev libjpeg-dev \
nasm tar libbz2-dev libgtk2.0-dev cmake git libfluidsynth-dev libgme-dev \
libopenal-dev timidity libwildmidi-dev unzip
sudo apt-get install libboost-all-dev
sudo apt-get install python3-dev python3-pip
pip3 install numpy
sudo apt-get install julia
julia
julia> using Pkg
julia> Pkg.add("CxxWrap")
pip install git+https://github.com/mwydmuch/ViZDoom.git
mkdir build
cd build
cmake .. -DCMAKE_BUILD_TYPE=Release -DBUILD_PYTHON=ON -DBUILD_JAVA=ON -DBUILD_LUA=ON -DBUILD_JULIA=ON
make
However, when I do this
cmake .. -DCMAKE_BUILD_TYPE=Release -DBUILD_PYTHON3=ON -DBUILD_JAVA=ON -DBUILD_LUA=ON -DBUILD_JULIA=ON
I am getting the following error:
-- Boost version: 1.65.1
-- Found the following Boost libraries:
-- filesystem
-- thread
-- system
-- date_time
-- chrono
-- regex
-- iostreams
-- atomic
CMake Deprecation Warning at cmake_modules/CreateLaunchers.cmake:48 (cmake_policy):
The OLD behavior for policy CMP0026 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
Call Stack (most recent call first):
src/vizdoom/CMakeLists.txt:13 (include)
-- Could NOT find GME (missing: GME_INCLUDE_DIR)
-- Using system zlib
-- Using system jpeg library
-- Using system bzip2 library
-- Using internal gme library
-- /usr/include
-- /usr/include
-- /home/tie/ViZDoom/src/vizdoom/lzma/C
-- Could not find FMOD include files
-- Could NOT find SndFile (missing: SNDFILE_LIBRARY SNDFILE_INCLUDE_DIR)
-- Could NOT find MPG123 (missing: MPG123_LIBRARIES MPG123_INCLUDE_DIR)
-- Selected assembler: /usr/bin/as
-- Boost version: 1.65.1
-- Found the following Boost libraries:
-- thread
-- system
-- date_time
-- chrono
-- atomic
-- Fluid synth libs: /usr/lib/x86_64-linux-gnu/libfluidsynth.so
-- pybind11 v2.8.1
CMake Error at src/lib_julia/CMakeLists.txt:1 (find_package):
By not providing "FindJlCxx.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "JlCxx", but
CMake did not find one.
Could not find a package configuration file provided by "JlCxx" with any of
the following names:
JlCxxConfig.cmake
jlcxx-config.cmake
Add the installation prefix of "JlCxx" to CMAKE_PREFIX_PATH or set
"JlCxx_DIR" to a directory containing one of the above files. If "JlCxx"
provides a separate development package or SDK, be sure it has been
installed.
-- Configuring incomplete, errors occurred!
See also "/home/tie/ViZDoom/build/CMakeFiles/CMakeOutput.log".
See also "/home/tie/ViZDoom/build/CMakeFiles/CMakeError.log".
I also install Julia successfully：
I think that there is CMake error or some version mismatch error but being new to it, I am unable to resolve it.
I'm trying to build opencv and opencv_contrib module but i'm getting following while building with cmake-gui :
Detected version of GNU GCC: 54 (504)
Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found suitable version "1.2.8", minimum required is "1.2.3")
Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8")
Checking for module 'gtk+-3.0'
No package 'gtk+-3.0' found
Checking for module 'gstreamer-base-1.0'
No package 'gstreamer-base-1.0' found
Checking for module 'gstreamer-video-1.0'
No package 'gstreamer-video-1.0' found
Checking for module 'gstreamer-app-1.0'
No package 'gstreamer-app-1.0' found
Checking for module 'gstreamer-riff-1.0'
No package 'gstreamer-riff-1.0' found
Checking for module 'gstreamer-pbutils-1.0'
No package 'gstreamer-pbutils-1.0' found
Checking for module 'gstreamer-base-0.10'
No package 'gstreamer-base-0.10' found
Checking for module 'gstreamer-video-0.10'
No package 'gstreamer-video-0.10' found
Checking for module 'gstreamer-app-0.10'
No package 'gstreamer-app-0.10' found
Checking for module 'gstreamer-riff-0.10'
No package 'gstreamer-riff-0.10' found
Checking for module 'gstreamer-pbutils-0.10'
No package 'gstreamer-pbutils-0.10' found
Looking for linux/videodev.h
Looking for linux/videodev.h - not found
Looking for linux/videodev2.h
Looking for linux/videodev2.h - found
Looking for sys/videoio.h
Looking for sys/videoio.h - not found
Checking for module 'libavresample'
No package 'libavresample' found
Checking for module 'libgphoto2'
No package 'libgphoto2' found
found IPP (ICV version): 9.0.1 [9.0.1]
at: /opencv-master/build/3rdparty/ippicv/ippicv_lnx
Could not find OpenBLAS lib. Turning OpenBLAS_FOUND off
Could NOT find Atlas (missing: Atlas_CLAPACK_INCLUDE_DIR)
A library with BLAS API found.
A library with LAPACK API found.
Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
Could NOT find JNI (missing: JAVA_AWT_LIBRARY JAVA_JVM_LIBRARY JAVA_INCLUDE_PATH JAVA_INCLUDE_PATH2 JAVA_AWT_INCLUDE_PATH)
Could NOT find Matlab (missing: MATLAB_MEX_SCRIPT MATLAB_INCLUDE_DIRS MATLAB_ROOT_DIR MATLAB_LIBRARIES MATLAB_LIBRARY_DIRS MATLAB_MEXEXT MATLAB_ARCH MATLAB_BIN)
VTK is not found. Please set -DVTK_DIR in CMake to VTK build directory, or to VTK install subdirectory with VTKConfig.cmake file
Caffe: NO
Protobuf: NO
Glog: NO
The protocol buffer compiler is found (/usr/bin/protoc)
CMake Error at /opencv_contrib-master/modules/dnn/cmake/OpenCVFindLibProtobuf.cmake:17 (PROTOBUF_GENERATE_CPP):
Unknown CMake command "PROTOBUF_GENERATE_CPP".
Call Stack (most recent call first):
/opencv_contrib-master/modules/dnn/CMakeLists.txt:5 (include)
Configuring incomplete, errors occurred!
See also "/opencv-master/build/CMakeFiles/CMakeOutput.log".
See also "/opencv-master/build/CMakeFiles/CMakeError.log".
Error box : Error in configuration process, project files may be invalid
Please look into it.
You must have matching versions of the opencv_contrib and the opencv itself.
Another fellow had a similar issue that is caused by the same thing. You can see my answer on the stack overflow HERE
I am using Python for making a script to work with some chemical structures in my PhD. I want to install openbabel libraries for python. I tried my best but I could not install it on Windows. I posted a question earlier about installing it on Windows at How do I install openbabel for Python 3.6 in Windows 10? but could not find a solution. The solution installed the library but it does not work and could not connect to SWIG.
No I am trying to install it on my office computer which is a mac for past 5 hours but I could not figure what is going on.
I tried to install it from source code of Opnbabel and link it with python3 but it is making problem.
If I use the following command:
cmake ../ -DPYTHON_BINDINGS=ON -DRUN_SWIG=ON
It successfully links it to Python 2.7 which I do not want. When I try the following options, it gives the error shown below:
cmake ../ -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPYTHON_BINDINGS=ON -DRUN_SWIG=ON
OR
cmake ../ -DRUN_SWIG=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPYTHON_INCLUDE_DIR=/Library/Frameworks/Python.framework/Versions/3.5/include/python3.5m -DPYTHON_LIBRARY=/Library/Frameworks/Python.framework/Versions/3.5/lib/libpython3.5m.dylib -DPYTHON_BINDINGS=ON
It gives the following error at the end after a lot of successful output:
-- Found PythonInterp: /usr/bin/python3.6 (found version "1.4")
-- Found SWIG: /usr/local/bin/swig (found version "3.0.12")
-- Found SWIG: /usr/local/bin/swig (found suitable version "3.0.12", minimum required is "2.0")
-- Found PythonLibs: /usr/local/Cellar/python3/3.6.0/Frameworks/Python.framework/Versions/3.6/lib/libpython3.6m.dylib (found version "3.6.0")
-- Python bindings will be compiled
CMake Error at scripts/CMakeLists.txt:120 (install):
install TARGETS given no LIBRARY DESTINATION for module target
"bindings_python".
CMake Error at scripts/CMakeLists.txt:123 (install):
install FILES given no DESTINATION!
CMake Error at scripts/CMakeLists.txt:126 (install):
install FILES given no DESTINATION!
-- Configuring incomplete, errors occurred!
See also "/usr/local/Cellar/obabel/openbabel-master/ali/CMakeFiles/CMakeOutput.log".
See also "/usr/local/Cellar/obabel/openbabel-master/ali/CMakeFiles/CMakeError.log".
I am not sure why It detects the Python as v1.4 -- Found PythonInterp: /usr/bin/python3.6 (found version "1.4") instead of finding v.3.5.
I tried all the procedure with python 3.6 as well but the same errors occur. I am also using the openbabel obtained from github which was said to be working with these commands at the following post: http://forums.openbabel.org/OpenBabel-for-Python-3-td4659432.html
But it doesn't work as well.
Please help me as I require this module for my research.
Thanks
I found the solution for that. Here is the detailed solution:
Download Open Babel from its original source (https://github.com/openbabel/openbabel)
Extract it and cd into it (openbabel-master)
Make a directory “build” and cd into it.
RUN the following command:
cmake ../ -DPYTHON_EXECUTABLE=/Library/Frameworks/Python.framework/Versions/3.5/bin/python3 -DPYTHON_BINDINGS=ON -DRUN_SWIG=ON
In the command above, the “-DPYTHON_EXECUTABLE” switch tells it the path where Python3 interpretor is found. You can check it by which python3 at a terminal.
make
make install
All Done! :)