In place replacement of text in a file in Python - python

I am using the following code to upload a file on server using FTP after editing it:
import fileinput
file = open('example.php','rb+')
for line in fileinput.input('example.php'):
if 'Original' in line :
file.write( line.replace('Original', 'Replacement'))
file.close()
There is one thing, instead of replacing the text in its original place, the code adds the replaced text at the end and the text in original place is unchanged.
Also, instead of just the replaced text, it prints out the whole line. Could anyone please tell me how to resolve these two errors?

1) The code adds the replaced text at the end and the text in original place is unchanged.
You can't replace in the body of the file because you're opening it with the + signal. This way it'll append to the end of the file.
file = open('example.php','rb+')
But this only works if you want to append to the end of the document.
To bypass this you may use seek() to navigate to the specific line and replace it. Or create 2 files: an input_file and an output_file.
2) Also, instead of just the replaced text, it prints out the whole line.
It's because you're using:
file.write( line.replace('Original', 'Replacement'))
Free Code:
I've segregated into 2 files, an inputfile and an outputfile.
First it'll open the ifile and save all lines in a list called lines.
Second, it'll read all these lines, and if 'Original' is present, it'll replace it.
After replacement, it'll save into ofile.
ifile = 'example.php'
ofile = 'example_edited.php'
with open(ifile, 'rb') as f:
lines = f.readlines()
with open(ofile, 'wb') as g:
for line in lines:
if 'Original' in line:
g.write(line.replace('Original', 'Replacement'))
Then if you want to, you may os.remove() the non-edited file with:
More Info: Tutorials Point: Python Files I/O

The second error is how the replace() method works.
It returns the entire input string, with only the specified substring replaced. See example here.
To write to a specific place in the file, you should seek() to the right position first.
I think this issue has been asked before in several places, I would do a quick search of StackOverflow.
Maybe this would help?

Replacing stuff in a file only works well if original and replacement have the same size (in bytes) then you can do
with open('example.php','rb+') as f:
pos=f.tell()
line=f.readline()
if b'Original' in line:
f.seek(pos)
f.write(line.replace(b'Original',b'Replacement'))
(In this case b'Original' and b'Replacement' do not have the same size so your file will look funny after this)
Edit:
If original and replacement are not the same size, there are different possibilities like adding bytes to fill the hole or moving everything after the line.

Related

Add 1 word after readlines()

I am still learning python and have a question about the function readlines() The following is a part of my script:
f = open("demofile.txt", "r")
text = "".join(f.readlines())
print(text)
demofile.txt contains:
This is the first line
This is the second line
This is the third line
Now I want to add a single word to this so I get:
This is the first line
This is the second line
This is the third line
Example
I thought of something easy way of doing it:
f = open("demofile.txt", "r")
text = "".join(f.readlines())."Example"
print(text)
But that doesn't work (of course) I googled and looked around here but didn't really have the good keywords to search for this issue. Hopefully someone can point me in the right direction.
.readlines() returns list you can append() to it:
with open("demofile.txt") as txt:
lines = txt.readlines()
lines.append("Example")
text = "".join(lines)
print(text)
or you can unpack the file object txt, since its an iterator to a new list with the word you wanted to add:
with open("demofile.txt") as txt:
text = "".join([*txt, "Example"])
print(text)
Firstly, the open function in python opens a file in read mode by default. Thus, you do not need to specify the mode r when opening the file. Secondly, you should always close a file after you are done with it. A with statement in python handles this for you. Moreover, instead of using . to add Example onto the end of the string, you should use the concatenation operator in python to add a newline character, \n, and the string, Example.
with open("demofile.txt") as f:
text = "".join(f.readlines()) + "\nExample"
print(text)
This should help you. While dealing with files. It is always recommended to use with open('filename','r') as f instead of f=open('filename','r'). Using ContextManager during file open is the idea that this file will be open in any case whether everything is ok or any exception is raised. And you don't need to explicitly close the file i.e f.close().
end_text='Example'
with open('test.txt','r') as f:
text=''.join(f.readlines())+'\n'+end_text
print(text)

Replace string in specific line of nonstandard text file

Similar to posting: Replace string in a specific line using python, however results were not forethcomming in my slightly different instance.
I working with python 3 on windows 7. I am attempting to batch edit some files in a directory. They are basically text files with .LIC tag. I'm not sure if that is relevant to my issue here. I am able to read the file into python without issue.
My aim is to replace a specific string on a specific line in this file.
import os
import re
groupname = 'Oldtext'
aliasname = 'Newtext'
with open('filename') as f:
data = f.readlines()
data[1] = re.sub(groupname,aliasname, data[1])
f.writelines(data[1])
print(data[1])
print('done')
When running the above code I get an UnsupportedOperation: not writable. I am having some issue writing the changes back to the file. Based on suggestion of other posts, I edited added the w option to the open('filename', "w") function. This causes all text in the file to be deleted.
Based on suggestion, the r+ option was tried. This leads to successful editing of the file, however, instead of editing the correct line, the edited line is appended to the end of the file, leaving the original intact.
Writing a changed line into the middle of a text file is not going to work unless it's exactly the same length as the original - which is the case in your example, but you've got some obvious placeholder text there so I have no idea if the same is true of your actual application code. Here's an approach that doesn't make any such assumption:
with open('filename', 'r') as f:
data = f.readlines()
data[1] = re.sub(groupname,aliasname, data[1])
with open('filename', 'w') as f:
f.writelines(data)
EDIT: If you really wanted to write only the single line back into the file, you'd need to use f.tell() BEFORE reading the line, to remember its position within the file, and then f.seek() to go back to that position before writing.

Write a program in Python 3.5 that reads a file, then writes a different file with the same text that was in the first one as well as more?

The exact question to this problem is:
*Create a file with a 20 lines of text and name it “lines.txt”. Write a program to read this a file “lines.txt” and write the text to a new file, “numbered_lines.txt”, that will also have line numbers at the beginning of each line.
Example:
Input file: “lines.txt”
Line one
Line two
Expected output file:
1 Line one
2 Line two
I am stuck, and this is what I have so far. I am a true beginner to Python and my instructor does not make things very clear. Critique and help much appreciated.
file_object=open("lines.txt",'r')
for ln in file_object:
print(ln)
count=1
file_input=open("numbered_lines.txt",'w')
for Line in file_object:
print(count,' Line',(str))
count=+1
file_object.close
file_input.close
All I get for output is the .txt file I created stating lines 1-20. I am very stuck and honestly have very little idea about what I am doing. Thank you
You have all the right parts, and you're almost there:
When you do
for ln in file_object:
print(ln)
you've exhausted the contents of that file, and you won't be able to read them again, like you try to do later on.
Also, print does not write to a file, you want file_input.write(...)
This should fix all of that:
infile = open("lines.txt", 'r')
outfile = open("numbered_lines.txt", 'w')
line_number = 1
for line in infile:
outfile.write(str(line_number) + " " + line)
infile.close()
outfile.close()
However, here is a more pythonic way to do it:
with open("lines.txt") as infile, open("numbered_lines.txt", 'w') as outfile:
for i, line in enumerate(infile, 1):
outfile.write("{} {}".format(i, line))
Good first try, and with that, I can go through your code and explain what you did right (or wrong)
file_object=open("lines.txt",'r')
for ln in file_object:
print(ln)
This is fine, though generally you want to put a space before and after assignments (you are assigning the results of open to file_object) and add a space after a,` when separating arguments, so you might want to write that like so:
file_object = open("lines.txt", 'r')
for ln in file_object:
print(ln)
However, at this point the internal reference in the file_object have reached the end of the file, so if you wish to reuse the same object, you need to seek back to the beginning position, which is 0. As your assignment only states write to the file (and not on the screen), the above loop should be omitted from the file (but I get what you want to do, you want to see the contents of the file immediately though sometimes instructors are pretty strict on what they accept). Moving on:
count=1
file_input=open("numbered_lines.txt",'w')
for Line in file_object:
Looks pretty normal so far, again, minor formatting issues. In Python, typically we name all variables lower-case, as names with Capitalization are generally reserved for class names (if you wish to, you may read about them). Now we enter into the loop you got
print(count,' Line',(str))
This prints not quite what you want. as ' Line' is enclosed inside a quote, it is treated as a string literal - so it's treated literally as text and not code. Given that you had assigned Line, you want to take out the quotes. The (str) at the end simply just print out the string object and it definitely is not what you want. Also, you forgot to specify the file you want to print to. By default it will print to the screen, but you want to print it to the the numbered_lines.txt file which you had opened and assigned to file_input. We will correct this later.
count=+1
If you format this differently, you are assigning +1 to count. I am guessing you wanted to use the += operator to increment it. Remember this on your quiz/tests.
Finally:
file_object.close
file_input.close
They are meant to be called as functions, you need to invoke them by adding parentheses at the end with arguments, but as close takes no arguments, there will be nothing inside the parentheses. Putting everything together, the complete corrected code for your program should look like this
file_object = open("lines.txt", 'r')
count = 1
file_input = open("numbered_lines.txt", 'w')
for line in file_object:
print(count, line, file=file_input)
count += 1
file_object.close()
file_input.close()
Run the program. You will notice that there is an extra empty line between every line of text. This is because by default the print function adds a new line end character; the line you got from the file included a new-line character at the end (that's what make them lines, right?) so we don't have to add our own here. You can of course change it to an empty string. That line will look like this.
print(count, line, file=file_input, end='')
Naturally, other Python programmers will tell you that there are Pythonic ways, but you are just starting out, don't worry too much about them (although you can definitely pick up on this later and I highly encourage you to!)
The right way to open a file is using a with statement:
with open("lines.txt",'r') as file_object:
... # do something
That way, the context manager introduced by with will close your file at the end of "something " or in case of exception.
Of course, you can close the file yourself if you are not familiar with that. Not that close is a method: to call it you need parenthesis:
file_object.close()
See the chapter 7.2. Reading and Writing Files, in the official documentation.
In the first loop you're printing the contents of the input file. This means that the file contents have already been consumed when you get to the second loop. (Plus the assignment didn't ask you to print the file contents.)
In the second loop you're using print() instead of writing to a file. Try file_input.write(str(count) + " " + Line) (And file_input seems like a bad name for a file that you will be writing to.)
count=+1 sets count to +1, i.e. positive one. I think you meant count += 1 instead.
At the end of the program you're calling .close instead of .close(). The parentheses are important!

Delete a line in multiple text files with the same line beginning but varying line ending using Python v3.5

I have a folder full of .GPS files, e.g. 1.GPS, 2.GPS, etc...
Within each file is the following five lines:
Trace #1 at position 0.004610
$GNGSA,A,3,02,06,12,19,24,25,,,,,,,2.2,1.0,2.0*21
$GNGSA,A,3,75,86,87,,,,,,,,,,2.2,1.0,2.0*2C
$GNVTG,39.0304,T,39.0304,M,0.029,N,0.054,K,D*32
$GNGGA,233701.00,3731.1972590,S,14544.3073733,E,4,09,1.0,514.675,M,,,0.49,3023*27
...followed by the same data structure, with different values, over the next five lines:
Trace #6 at position 0.249839
$GNGSA,A,3,02,06,12,19,24,25,,,,,,,2.2,1.0,2.0*21
$GNGSA,A,3,75,86,87,,,,,,,,,,2.2,1.0,2.0*2C
$GNVTG,247.2375,T,247.2375,M,0.081,N,0.149,K,D*3D
$GNGGA,233706.00,3731.1971997,S,14544.3075178,E,4,09,1.0,514.689,M,,,0.71,3023*2F
(I realise the values after the $GNGSA lines don't vary in the above example. This is just a bad example... in the real dataset they do vary!)
I need to remove the lines that begin with "$GNGSA" and "$GNVTG" (i.e. I need to delete lines 2, 3, and 4 from each group of five lines within each .GPS file).
This five-line pattern continues for a varying number of times throughout each file (for some files, there might only be two five-line groups, while other files might have hundreds of the five-line groups). Hence, deleting these lines based on the line number will not work (because the line number would be variable).
The problem I am having (as seen in the above examples) is that the text that follows the "$GNGSA" or "$GNVTG" varies.
I'm currently learning Python (I'm using v3.5), so figured this would make for a good project for me to learn a few new tricks...
What I've tried already:
So far, I've managed to create the code to loop through the entire folder:
import os
indir = '/Users/dhunter/GRID01/' # input directory
for i in os.listdir(indir): # for each "i" (iteration) within the indir variable directory...
if i.endswith('.GPS'): # if the filename of an iteration ends with .GPS, then...
print(i + ' loaded') # print the filename to CLI, simply for debugging purposes.
with open(indir + i, 'r') as my_file: # open the iteration file
file_lines = my_file.readlines() # uses the readlines method to create a list of all lines in the file.
print(file_lines) # this prints the entire contents of each file to CLI for debugging purposes.
Everything in the above works perfectly.
What I need help with:
How do I detect and delete the lines themselves, and then save the file (to the same location; there is no need to save to a different filename)?
The filenames - which usually end with ".GPS" - sometimes end with ".gps" instead (the only difference being the case). My above code will only work with the uppercase files. Besides completely duplicating the code and changing the endswith argument, how do I make it work with both cases?
In the end, my file needs to look something like this:
Trace #1 at position 0.004610
$GNGGA,233701.00,3731.1972590,S,14544.3073733,E,4,09,1.0,514.675,M,,,0.49,3023*27
Trace #6 at position 0.249839
$GNGGA,233706.00,3731.1971997,S,14544.3075178,E,4,09,1.0,514.689,M,,,0.71,3023*2F
Any suggestions, please? Thanks in advance. :)
You're almost there.
import os
indir = '/Users/dhunter/GRID01/' # input directory
for i in os.listdir(indir): # for each "i" (iteration) within the indir variable directory...
if i.endswith('.GPS'): # if the filename of an iteration ends with .GPS, then...
print(i + ' loaded') # print the filename to CLI, simply for debugging purposes.
with open(indir + i, 'r') as my_file: # open the iteration file
for line in my_file:
if not line.startswith('$GNGSA') and not line.startswith('$GNVTG'):
print(line)
As per what the others have said, you're on the right track! Where you're going wrong is in the case-sensitive file extension check, and in reading in the entire file contents at once (this isn't per se wrong, but it's probably adding complexity we won't need).
I've commented your code, removing all the debug stuff for simplicity, to illustrate what I mean:
import os
indir = '/path/to/files'
for i in os.listdir(indir):
if i.endswith('.GPS'): #This CASE SENSITIVELY checks the file extension
with open(indir + i, 'r') as my_file: # Opens the file
file_lines = my_file.readlines() # This reads the ENTIRE file at once into an array of lines
So we need to fix the case sensitivity issue, and instead of reading in all the lines, we'll instead read the file line-by-line, check each line to see if we want to discard it or not, and write the lines we're interested in into an output file.
So, incorporating #tdelaney's case-insensitive fix for file name, we replace line #5 with
if i.lower().endswith('.gps'): # Case-insensitively check the file name
and instead of reading in the entire file at once, we'll instead iterate over the file stream and print each desired line out
with open(indir + i) as in_file, open(indir + i + 'new.gps') as out_file: # Open the input file for reading and creates + opens a new output file for writing - thanks #tdelaney once again!
for line in in_file # This reads each line one-by-one from the in file
if not line.startswith('$GNGSA') and not line.startswith('$GNVTG'): # Check the line has what we want (thanks Avinash)
out_file.write(line + "\n") # Write the line to the new output file
Note that you should make certain that you open the output file OUTSIDE of the 'for line in in_file' loop, or else the file will be overwritten on every iteration which will erase what you've already written to it so far (I suspect this is the issue you've had with the previous answers). Open both files at the same time and you can't go wrong.
Alternatively, you can specify the file access mode when you open the file, as per
with open(indir + i + 'new.gps', 'a'):
which will open the file in append-mode, which is a specialised from of write-mode that preserves the original contents of the file, and appends new data to it instead of overwriting existing data.
Ok, based on suggestions by Avinash Raj, tdelaney, and Sampson Oliver, here on Stack Overflow, and another friend who helped privately, here is the solution that is now working:
import os
indir = '/Users/dhunter/GRID01/' # input directory
for i in os.listdir(indir): # for each "i" (iteration) within the indir variable directory...
if i.lower().endswith('.gps'): # if the filename of an iteration ends with .GPS, then...
if not i.lower().endswith('.gpsnew.gps'): # if the filename does not end with .gpsnew.gps, then...
print(i + ' loaded') # print the filename to CLI.
with open (indir + i, 'r') as my_file:
for line in my_file:
if not line.startswith('$GNGSA'):
if not line.startswith('$GNVTG'):
with open(indir + i + 'new.gps', 'a') as outputfile:
outputfile.write(line)
outputfile.write('\r\n')
(You'll see I had to add in another layer of if statement to stop it from using the output files from previous uses of the script "if not i.lower().endswith('.gpsnew.gps'):", but this line can easily be deleted for anyone who uses these instructions in future)
We switched the open mode on the third-last line to "a" for append, so that it would save all the right lines to the file, rather than overwriting each time.
We also added in the final line to add a line break at the end of each line.
Thanks everyone for their help, explanations, and suggestions. Hopefully this solution will be useful to someone in future. :)
2. The filenames:
The if accepts any expression returning a truth value, and you can combine expressions with the standart boolean operators: if i.endswith('.GPS') or i.endswith('.gps').
You can also put the ... and ... expression after the if in brackets, to feel more sure, but it's not neccessary.
Alternatively, as a less universal solution, (but since you wanted to learn a few tricks :)) you can use string manipulation in this case: an object of type string has a lot of methods. '.gps'.upper() gives '.GPS' -- try, if you can make use of this! (even a printed string is a string object, but your variables behave the same).
1. Finding the Lines:
As you can see in the other solution, you need not read out all of your lines, you can check if want to have them 'on the fly'. But I will stick to your approach with readlines. It gives you a list, and lists support indexing and slicing. Try:
anylist[stratindex, endindex, stride], for any values, so for example try: newlist = range(100)[1::5].
It's always helpfull to try out the easy basic operations in interactive mode, or at the beginning of your script. Here range(100) is just some sample list. Here you see, how the python for-syntax works, differently than in other languages: you can iterate over any list, and if you just need integers, you create a list with integers with range().
So this will work the same with any other list -- e.g. the one you get from readlines()
This selects a slice from the list, beginnig with the second element, ending at the end (since the end index is omitted), and taking every 5th element. Now you have this sub-list, you can just revome it from the original. So for the example with the range:
a = range(100)
del(a[1::5])
print a
So you see, that the appropriate items have been removed. Now do the same with your file_lines, and then proceed to remove the other lines you want to remove.
Then, in a new with block, open the file for writing and do writelines(file_lines), so the remainig lines are written back to the file.
Of course you can also take the approach to look for the content of each line with a for loop over your list and startswith(). Or you can combine the approaches, and check, if deleting lines by number leaves the right starts, so you can print an error if something is unexpected...
3. Saving the file
You can close your file after you have the lines saved in the readlines(). In fact this is done automatically at the end of the with-block. Then just open it in 'w' mode instead of 'r' and do yourfilename.writelines(yourlist). You don't need to save, it's saven on closing.

How do I modify the last line of a file?

The last line of my file is:
29-dez,40,
How can I modify that line so that it reads:
29-Dez,40,90,100,50
Note: I don't want to write a new line. I want to take the same line and put new values after 29-Dez,40,
I'm new at python. I'm having a lot of trouble manipulating files and for me every example I look at seems difficult.
Unless the file is huge, you'll probably find it easier to read the entire file into a data structure (which might just be a list of lines), and then modify the data structure in memory, and finally write it back to the file.
On the other hand maybe your file is really huge - multiple GBs at least. In which case: the last line is probably terminated with a new line character, if you seek to that position you can overwrite it with the new text at the end of the last line.
So perhaps:
f = open("foo.file", "wb")
f.seek(-len(os.linesep), os.SEEK_END)
f.write("new text at end of last line" + os.linesep)
f.close()
(Modulo line endings on different platforms)
To expand on what Doug said, in order to read the file contents into a data structure you can use the readlines() method of the file object.
The below code sample reads the file into a list of "lines", edits the last line, then writes it back out to the file:
#!/usr/bin/python
MYFILE="file.txt"
# read the file into a list of lines
lines = open(MYFILE, 'r').readlines()
# now edit the last line of the list of lines
new_last_line = (lines[-1].rstrip() + ",90,100,50")
lines[-1] = new_last_line
# now write the modified list back out to the file
open(MYFILE, 'w').writelines(lines)
If the file is very large then this approach will not work well, because this reads all the file lines into memory each time and writes them back out to the file, which is very inefficient. For a small file however this will work fine.
Don't work with files directly, make a data structure that fits your needs in form of a class and make read from/write to file methods.
I recently wrote a script to do something very similar to this. It would traverse a project, find all module dependencies and add any missing import statements. I won't clutter this post up with the entire script, but I'll show how I went about modifying my files.
import os
from mmap import mmap
def insert_import(filename, text):
if len(text) < 1:
return
f = open(filename, 'r+')
m = mmap(f.fileno(), os.path.getsize(filename))
origSize = m.size()
m.resize(origSize + len(text))
pos = 0
while True:
l = m.readline()
if l.startswith(('import', 'from')):
continue
else:
pos = m.tell() - len(l)
break
m[pos+len(text):] = m[pos:origSize]
m[pos:pos+len(text)] = text
m.close()
f.close()
Summary: This snippet takes a filename and a blob of text to insert. It finds the last import statement already present, and sticks the text in at that location.
The part I suggest paying most attention to is the use of mmap. It lets you work with files in the same manner you may work with a string. Very handy.

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